Data search
Results for MligTC455_55842
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_55842 | 8 | 0.17 | Mlig455_011618 | Neo: - Age: - |
Mlig455_011618 {REF} {Length: 208} {NoTransDecoderORF} |
Cumulative graph for MligTC455_55842
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_55842
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_55842 | 8 | 0.17 | Mlig455_011618 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_011618 {REF} {Length: 208} {NoTransDecoderORF} | |
| 2. | MligTC455_55397 | 4 | 0.09 | Mlig455_051517 | Neo: - Age: - |
0.984 | - | - | - | - | 0.984 | - | Mlig455_051517 {REF} {Length: 200} {NoTransDecoderORF} | |
| 3. | MligTC455_14021 | 15 | 0.31 | Mlig455_000433, Mlig455_024852 | Neo: - Age: - |
0.983 | - | - | - | - | 0.983 | - | Mlig455_000433 {REF} {Length: 1826} {RNA1310_112915} Mlig455_024852 {REF} {Length: 202} {NoTransDecoderORF} {RNA1310_139314} |
|
| 4. | MligTC455_10164 | 25 | 0.53 | Mlig455_047948 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_047948 {REF} {Length: 437} {NoTransDecoderORF} {RNA1509_42160} {RNA1310_38543} {RNA815_64948} | |
| 5. | MligTC455_05920 | 6 | 0.13 | Mlig455_050975 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_050975 {REF} {Length: 592} {NoTransDecoderORF} {RNA1509_41075} {RNA1310_75397} {RNA815_45642} | |
| 6. | MligTC455_14026 | 38 | 0.8 | Mlig455_023627 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_023627 {REF} {Length: 1475} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=30.1]; CS domain [PF04969.18, score=27.0]} {RNA1509_6357} {RNA1310_134529} {RNA815_1252} | |
| 7. | MligTC455_00053 | 10 | 0.2 | Mlig455_045698 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_045698 {REF} {Length: 347} {NoTransDecoderORF} | |
| 8. | MligTC455_36395 | 22 | 0.47 | Mlig455_052440 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_052440 {REF} {Length: 1750} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=49.8]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=62.0, Expect=7e-13]} {RNA1509_18603} {RNA1310_80625} {RNA815_38310} | |
| 9. | MligTC455_38188 | 34 | 0.7 | Mlig455_012112 | Neo: - Age: - |
SOX2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_012112 {REF} {Length: 2469} {Pfam: HMG (high mobility group) box [PF00505.21, score=84.6]; HMG-box domain [PF09011.12, score=37.3]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=127, Expect=1e-33]; ENSG00000125285, SOX21, SRY-box 21, [Score=126, Expect=5e-34]; ENSG00000182968, SOX1, SRY-box 1, [Score=124, Expect=2e-32]; ENSG00000168875, SOX14, SRY-box 14, [Score=124, Expect=2e-33]; ENSG00000134595, SOX3, SRY-box 3, [Score=123, Expect=2e-31]; ENSG00000129194, SOX15, SRY-box 15, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=127, Expect=3e-34]; ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=127, Expect=7e-34]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=125, Expect=1e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=124, Expect=8e-32]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=124, Expect=1e-33]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=122, Expect=8e-33]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [Score=128, Expect=6e-33]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=129, Expect=3e-35]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [Score=132, Expect=9e-35]} {RNA1509_52207} {RNA1310_94698} {RNA815_61228} |
| 10. | MligTC455_30845 | 20 | 0.41 | Mlig455_011948 | Neo: - Age: Up-Down-Up |
CRB1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_011948 {REF} {Length: 2732} {Human: ENSG00000134376, CRB1, crumbs 1, cell polarity complex component, [Score=62.0, Expect=1e-09]} {Mouse: ENSMUSG00000021614, Vcan, versican, [Score=57.0, Expect=3e-08]; ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0259685, crb, crumbs, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00003001, lin-12, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=52.0, Expect=5e-07]} {RNA1509_37192} {RNA1310_27038} {RNA815_4589.1} |
Berezikov Lab - 2020-2021 © ERIBA