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Results for MligTC455_06717

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06717 29 0.60 Mlig455_044972

Neo: -

Age: -

 Mlig455_044972 {REF} {Length: 529} {NoTransDecoderORF}

Cumulative graph for MligTC455_06717

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.543 0.892 1.00000 1.00000
RegionR2 -2.134 0.892 1.00000 1.00000
RegionR3 -1.868 0.892 1.00000 1.00000
RegionR4 0.519 0.892 0.18752 0.46127
RegionR5 -1.448 0.892 1.00000 1.00000
RegionR6 -1.028 0.892 1.00000 1.00000
RegionR7 1.836 0.892 1.00000 1.00000
RegionR8 2.58 0.892 0.98485 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.859 0.892 1.00000 1.00000
RegenerationR2 4.088 0.892 0.00508 0.11182
RegenerationR3 0.872 0.892 0.77788 0.97428
RegenerationR4 1.534 0.892 0.98980 1.00000
RegenerationR5 0.537 0.892 0.51313 0.86601
RegenerationR6 2.616 0.892 0.16666 0.49716
RegenerationBL -2.26 0.892 0.96875 1.00000
RegenerationTP -0.479 0.892 0.61451 0.96928


Genes with expression patterns similar to MligTC455_06717

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06717 29 0.6 Mlig455_044972

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_044972 {REF} {Length: 529} {NoTransDecoderORF}
2. MligTC455_34439 8 0.17 Mlig455_051396

Neo: -

Age: -

 NFYC 0.997 - - - - 0.997 - Mlig455_051396 {REF} {Length: 2963} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=47.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=36.3]; CENP-S associating Centromere protein X [PF09415.12, score=19.0]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=112, Expect=3e-28]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=111, Expect=6e-29]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=94.4, Expect=6e-22]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [Score=79.3, Expect=4e-18]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=134, Expect=1e-37]} {RNA1509_29895} {RNA1310_28267.1} {RNA815_30059}
3. MligTC455_41515 72 1.5 Mlig455_018251

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_018251 {REF} {Length: 2630} {TRANSSPLICED} {RNA1509_46222} {RNA1310_24815} {RNA815_16210}
4. MligTC455_28942 26 0.55 Mlig455_024526

Neo: -

Age: Down-Up-Down

 0.984 - - - - 0.984 - Mlig455_024526 {REF} {Length: 6056} {TRANSSPLICED} {RNA1509_14315} {RNA1310_1783} {RNA815_29572}
5. MligTC455_52197 8 0.17 Mlig455_022949

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_022949 {REF} {Length: 1236} {RNA1509_48863} {RNA1310_9160} {RNA815_10117.1}
6. MligTC455_50666 131 2.72 Mlig455_034548

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_034548 {REF} {Length: 2489} {RNA1310_46048} {RNA815_41927}
7. MligTC455_26134 100 2.08 Mlig455_037023

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_037023 {REF} {Length: 2841} {RNA1509_41127} {RNA1310_13927} {RNA815_18472}
8. MligTC455_05806 27 0.55 Mlig455_063629

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_063629 {REF} {Length: 186} {NoTransDecoderORF} {RNA1310_40474} {RNA815_44080}
9. MligTC455_17718 27 0.55 Mlig455_055828

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_055828 {REF} {Length: 2178} {NoTransDecoderORF} {RNA1509_26167} {RNA1310_50509} {RNA815_59995}
10. MligTC455_34655 89 1.86 Mlig455_058020, Mlig455_058176

Neo: -

Age: -

Region-enriched R2: 5.798/0.00826

 PPEF1 0.956 - - - - 0.956 -

Mlig455_058020 {REF} {Length: 3007} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=84.9]; EF-hand domain pair [PF13499.8, score=77.8]; EF hand [PF00036.34, score=66.0]; EF-hand domain pair [PF13833.8, score=52.1]; EF-hand domain [PF13405.8, score=48.4]; EF hand [PF13202.8, score=38.2]; PPP5 TPR repeat region [PF08321.14, score=37.0]; EF-hand domain [PF14658.8, score=23.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.4]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [Score=416, Expect=2e-138]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=413, Expect=9e-138]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=404, Expect=3e-134]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=455, Expect=2e-155]} {Smed: dd_Smed_v6_11874_0_2, dd_Smed_v6_11874_0_2, [Score=516, Expect=2e-178]} {RNA1509_3508} {RNA1310_10928.2} {RNA815_11707}

Mlig455_058176 {REF} {Length: 3371} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=102.6]; EF-hand domain pair [PF13499.8, score=72.6]; EF hand [PF00036.34, score=64.2]; EF-hand domain pair [PF13833.8, score=51.3]; EF-hand domain [PF13405.8, score=46.1]; EF hand [PF13202.8, score=36.7]; PPP5 TPR repeat region [PF08321.14, score=36.6]; EF-hand domain [PF14658.8, score=26.5]; IQ calmodulin-binding motif [PF00612.29, score=21.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [RH, Score=546, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=520, Expect=3e-177]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=529, Expect=2e-180]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=598, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=671, Expect=0.0]} {RNA1509_3508} {RNA1310_10928.2} {RNA815_11707}
11. MligTC455_16281 159 3.31 Mlig455_042437, Mlig455_042488

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.300

Region-specific R4: 6.491

Region-enriched R4: 3.498/0.00088

 0.955 - - - - - 0.955

Mlig455_042437 {REF} {Length: 3615} {Pfam: Immunoglobulin domain [PF13927.8, score=19.8]; Immunoglobulin domain [PF13895.8, score=19.0]} {RNA1509_17265} {RNA1310_8841.1, RNA1509_17265} {RNA1509_17265, RNA815_10658}

Mlig455_042488 {REF} {Length: 2996} {Pfam: Immunoglobulin domain [PF13927.8, score=20.0]; Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 [PF12496.10, score=19.2]; Immunoglobulin domain [PF13895.8, score=19.1]} {RNA1509_17265} {RNA1310_8841.1} {RNA815_10658}
12. MligTC455_15597 28 0.59 Mlig455_061209

Neo: -

Age: -

 GABRA6 0.954 - - - - - 0.954 Mlig455_061209 {REF} {Length: 1255} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=22.7]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [Score=50.8, Expect=3e-08]; ENSG00000109158, GABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [Score=52.4, Expect=6e-09]; ENSMUSG00000029211, Gabra4, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4, [Score=50.8, Expect=2e-08]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [Score=54.7, Expect=5e-10]} {Celegans: WBGene00001586, ggr-1, Glycine receptor subunit beta-type 4, [Score=48.5, Expect=7e-08]} {Smed: dd_Smed_v6_53339_0_1, dd_Smed_v6_53339_0_1, [Score=45.8, Expect=2e-07]} {RNA1310_72520} {RNA815_42592}
13. MligTC455_44381 50 1.04 Mlig455_034187

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_034187 {REF} {Length: 1133} {Pfam: WSC domain [PF01822.21, score=41.3]} {RNA1310_44307} {RNA815_33128}
14. MligTC455_54792 10 0.21 Mlig455_024076

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_024076 {REF} {Length: 13} {TRANSSPLICED} {NoTransDecoderORF}
15. MligTC455_43359 13 0.27 Mlig455_067133

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_067133 {REF} {Length: 3559} {NoTransDecoderORF} {RNA1509_41181} {RNA1310_42331} {RNA815_8694}

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