Data search


search
Exact
Search

Results for MligTC455_41515

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41515 72 1.50 Mlig455_018251

Neo: -

Age: -

Mlig455_018251 {REF} {Length: 2630} {TRANSSPLICED} {RNA1509_46222} {RNA1310_24815} {RNA815_16210}

Cumulative graph for MligTC455_41515

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.352 1.747 0.56937 1.00000
RegionR2 0.249 1.747 0.80136 1.00000
RegionR3 1.324 1.747 0.30033 0.84241
RegionR4 1.908 1.747 0.21262 0.49830
RegionR5 0.181 1.747 0.79983 1.00000
RegionR6 0.372 1.747 0.73168 1.00000
RegionR7 -0.703 1.747 0.97752 1.00000
RegionR8 0.022 1.747 0.87798 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.224 1.747 0.99992 1.00000
RegenerationR2 0.516 1.747 0.61872 0.92289
RegenerationR3 -0.826 1.747 0.48320 0.85209
RegenerationR4 -0.826 1.747 0.52434 0.88141
RegenerationR5 0.398 1.747 0.74137 0.96918
RegenerationR6 1.074 1.747 0.34957 0.69460
RegenerationBL -0.774 1.747 0.69034 1.00000
RegenerationTP 0.287 1.747 0.86394 1.00000


Genes with expression patterns similar to MligTC455_41515

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41515 72 1.5 Mlig455_018251

Neo: -

Age: -

5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_018251 {REF} {Length: 2630} {TRANSSPLICED} {RNA1509_46222} {RNA1310_24815} {RNA815_16210}
2. MligTC455_34439 8 0.17 Mlig455_051396

Neo: -

Age: -

NFYC 0.986 - - - - 0.986 - Mlig455_051396 {REF} {Length: 2963} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=47.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=36.3]; CENP-S associating Centromere protein X [PF09415.12, score=19.0]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=112, Expect=3e-28]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=111, Expect=6e-29]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=94.4, Expect=6e-22]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [Score=79.3, Expect=4e-18]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=134, Expect=1e-37]} {RNA1509_29895} {RNA1310_28267.1} {RNA815_30059}
3. MligTC455_06717 29 0.6 Mlig455_044972

Neo: -

Age: -

0.985 - - - - 0.985 - Mlig455_044972 {REF} {Length: 529} {NoTransDecoderORF}
4. MligTC455_50666 131 2.72 Mlig455_034548

Neo: -

Age: -

0.985 - - - - 0.985 - Mlig455_034548 {REF} {Length: 2489} {RNA1310_46048} {RNA815_41927}
5. MligTC455_24653 152 3.16 Mlig455_003832

Neo: -

Age: logFC(26M/2M)=-0.444

AC270292.3 0.978 - - - 0.978 - - Mlig455_003832 {REF} {Length: 6722} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=81.5]; Nin one binding (NOB1) Zn-ribbon like [PF08772.13, score=20.4]} {Human: ENSG00000285372, AC270292.3, tankyrase, [Score=72.4, Expect=5e-12]; ENSG00000173273, TNKS, tankyrase, [Score=72.4, Expect=5e-12]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=72.0, Expect=4e-12]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=64.7, Expect=6e-10]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=71.2, Expect=3e-12]} {RNA1509_34061} {RNA1310_5037} {RNA815_3497}
6. MligTC455_54792 10 0.21 Mlig455_024076

Neo: -

Age: -

0.967 - - - - 0.967 - Mlig455_024076 {REF} {Length: 13} {TRANSSPLICED} {NoTransDecoderORF}
7. MligTC455_24654 134 2.8 Mlig455_033249

Neo: -

Age: -

0.966 - - - 0.966 - - Mlig455_033249 {REF} {Length: 1015} {NoTransDecoderORF} {RNA1310_65661.1} {RNA815_41693}
8. MligTC455_28942 26 0.55 Mlig455_024526

Neo: -

Age: Down-Up-Down

0.966 - - - - 0.966 - Mlig455_024526 {REF} {Length: 6056} {TRANSSPLICED} {RNA1509_14315} {RNA1310_1783} {RNA815_29572}
9. MligTC455_34655 89 1.86 Mlig455_058020, Mlig455_058176

Neo: -

Age: -

Region-enriched R2: 5.798/0.00826

PPEF1 0.966 - - - - 0.966 -

Mlig455_058020 {REF} {Length: 3007} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=84.9]; EF-hand domain pair [PF13499.8, score=77.8]; EF hand [PF00036.34, score=66.0]; EF-hand domain pair [PF13833.8, score=52.1]; EF-hand domain [PF13405.8, score=48.4]; EF hand [PF13202.8, score=38.2]; PPP5 TPR repeat region [PF08321.14, score=37.0]; EF-hand domain [PF14658.8, score=23.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.4]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [Score=416, Expect=2e-138]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=413, Expect=9e-138]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=404, Expect=3e-134]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=455, Expect=2e-155]} {Smed: dd_Smed_v6_11874_0_2, dd_Smed_v6_11874_0_2, [Score=516, Expect=2e-178]} {RNA1509_3508} {RNA1310_10928.2} {RNA815_11707}

Mlig455_058176 {REF} {Length: 3371} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=102.6]; EF-hand domain pair [PF13499.8, score=72.6]; EF hand [PF00036.34, score=64.2]; EF-hand domain pair [PF13833.8, score=51.3]; EF-hand domain [PF13405.8, score=46.1]; EF hand [PF13202.8, score=36.7]; PPP5 TPR repeat region [PF08321.14, score=36.6]; EF-hand domain [PF14658.8, score=26.5]; IQ calmodulin-binding motif [PF00612.29, score=21.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [RH, Score=546, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=520, Expect=3e-177]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=529, Expect=2e-180]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=598, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=671, Expect=0.0]} {RNA1509_3508} {RNA1310_10928.2} {RNA815_11707}
10. MligTC455_48722 236 4.92 Mlig455_015890

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_015890 {REF} {Length: 678} {NoTransDecoderORF} {RNA1509_59088} {RNA1310_113893}
11. MligTC455_16214 198 4.13 Mlig455_031891

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.762

AXIN2 0.961 - - - - 0.961 - Mlig455_031891 {REF} {Length: 5190} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=84.0]; Regulator of G protein signaling domain [PF00615.21, score=35.6]} {Human: ENSG00000168646, AXIN2, axin 2, [Score=132, Expect=3e-31]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [Score=111, Expect=5e-25]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=69.3, Expect=7e-12]} {Smed: dd_Smed_v6_4900_0_1, dd_Smed_v6_4900_0_1, [RH, Score=115, Expect=1e-26]} {RNA1509_26666} {RNA1310_18759} {RNA815_19659}
12. MligTC455_26134 100 2.08 Mlig455_037023

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_037023 {REF} {Length: 2841} {RNA1509_41127} {RNA1310_13927} {RNA815_18472}
13. MligTC455_28936 652 13.59 Mlig455_048785

Neo: Int S/G2/M

Age: -

0.956 - - - - - 0.956 Mlig455_048785 {REF} {Length: 5422} {Pfam: Universal stress protein family [PF00582.28, score=77.4]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=109, Expect=3e-31]} {RNA1509_23239, RNA1509_24069, RNA1509_2764, RNA1509_59134} {RNA1310_13748, RNA1509_23239, RNA1509_2764, RNA1509_59134} {RNA1509_23239, RNA1509_2764, RNA1509_59134, RNA815_15064}
14. MligTC455_46844 1466 30.54 Mlig455_033495, Mlig455_069242

Neo: -

Age: -

Region-enriched R2: 3.929/0.00054

0.951 - - - 0.951 - -

Mlig455_033495 {REF} {Length: 510} {RNA1509_52173} {RNA1310_82836} {RNA815_43043}

Mlig455_069242 {REF} {Length: 707} {RNA1509_33548, RNA1509_52173} {RNA1310_82836, RNA1509_33548, RNA1509_52173} {RNA1509_33548, RNA1509_52173, RNA815_43043}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA