M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_07092

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07092 12 0.24 Mlig455_050400

Neo: -

Age: Down-Up-Up

 Mlig455_050400 {REF} {Length: 1193} {TRANSSPLICED} {RNA1509_13268} {RNA1310_2251.1} {RNA815_8327}

Cumulative graph for MligTC455_07092

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.885 0.807 0.99970 1.00000
RegionR2 -1.05 0.807 0.99977 1.00000
RegionR3 2.401 0.807 0.06957 0.46609
RegionR4 2.652 0.807 0.05410 0.20329
RegionR5 0.231 0.807 0.50222 0.86542
RegionR6 -1.308 0.807 0.99979 1.00000
RegionR7 -1.066 0.807 0.99974 1.00000
RegionR8 -0.976 0.807 0.99974 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.012 0.807 0.99999 1.00000
RegenerationR2 2.862 0.807 0.04549 0.35253
RegenerationR3 0.058 0.807 0.98675 1.00000
RegenerationR4 -0.104 0.807 0.90849 1.00000
RegenerationR5 0.492 0.807 0.72291 0.96057
RegenerationR6 2.737 0.807 0.15619 0.48336
RegenerationBL 0.017 0.807 1.00000 1.00000
RegenerationTP -0.046 0.807 0.99996 1.00000


Genes with expression patterns similar to MligTC455_07092

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07092 12 0.24 Mlig455_050400

Neo: -

Age: Down-Up-Up

 4 1.000 1.000 - 1.000 1.000 - Mlig455_050400 {REF} {Length: 1193} {TRANSSPLICED} {RNA1509_13268} {RNA1310_2251.1} {RNA815_8327}
2. MligTC455_50842 33 0.68 Mlig455_046712

Neo: Germline

Age: logFC(26M/2M)=-0.808

 ARHGAP11A 2.464 0.775 0.715 - - 0.974 - Mlig455_046712 {REF} {Length: 2034} {Pfam: RhoGAP domain [PF00620.29, score=117.4]} {Human: ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [RH, Score=126, Expect=1e-30]; ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [RH, Score=126, Expect=1e-30]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [RH, Score=124, Expect=5e-31]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [RH, Score=115, Expect=6e-28]} {Dmel: FBgn0259216, RhoGAP102A, Rho GTPase activating protein at 102A, [RH, Score=75.9, Expect=2e-14]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=89.0, Expect=1e-18]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=93.2, Expect=2e-20]} {RNA1509_48726} {RNA1310_15193, RNA1509_48726} {RNA1509_48726, RNA815_14855}
3. MligTC455_50843 66 1.38 Mlig455_046856

Neo: Germline

Age: Down-Up-Down

 ARHGAP11A 2.445 0.763 0.701 - - 0.981 - Mlig455_046856 {REF} {Length: 1901} {Pfam: RhoGAP domain [PF00620.29, score=92.0]} {Human: ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=90.1, Expect=7e-19]; ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=90.1, Expect=7e-19]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=89.0, Expect=1e-18]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=81.3, Expect=2e-16]} {Dmel: FBgn0038747, RhoGAP92B, Rho GTPase activating protein at 92B, [Score=63.5, Expect=1e-10]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=84.3, Expect=2e-17]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=70.9, Expect=3e-13]} {RNA1509_48726} {RNA1310_15193} {RNA815_14855}
4. MligTC455_53084 31 0.64 Mlig455_032500

Neo: -

Age: -

 SLC22A6 1.786 - - - 0.801 0.985 - Mlig455_032500 {REF} {Length: 2144} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=119, Expect=8e-31]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=116, Expect=8e-30]; ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=114, Expect=5e-29]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=122, Expect=3e-32]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=120, Expect=2e-31]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=124, Expect=1e-32]} {Celegans: WBGene00022348, Y82E9BR.16, [Score=97.8, Expect=2e-23]} {Smed: dd_Smed_v6_10826_0_1, dd_Smed_v6_10826_0_1, [Score=95.9, Expect=1e-24]} {RNA1509_47524} {RNA1310_11382, RNA1509_47524} {RNA1509_47524, RNA815_3922}
5. MligTC455_15366 4 0.07 Mlig455_032670

Neo: -

Age: -

 0.997 - - - - 0.997 - Mlig455_032670 {REF} {Length: 1354} {Smed: dd_Smed_v6_1477_1_1, dd_Smed_v6_1477_1_1, [Score=45.1, Expect=5e-06]} {RNA1310_32867}
6. MligTC455_32260 4 0.08 Mlig455_036086

Neo: -

Age: Up-Down-Down

 0.992 - - - - 0.992 - Mlig455_036086 {REF} {Length: 3691} {TRANSSPLICED} {Pfam: Integrase core domain [PF00665.28, score=46.8]; Mab-21 protein [PF03281.16, score=37.1]; Ankyrin repeats (many copies) [PF13637.8, score=21.5]; Zinc knuckle [PF00098.25, score=19.9]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_11087} {RNA1310_25836.1} {RNA815_3666.1}
7. MligTC455_40313 5 0.11 Mlig455_005695

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=2.229

 CYP2J2 0.983 - - - - 0.983 - Mlig455_005695 {REF} {Length: 1376} {Pfam: Cytochrome P450 [PF00067.24, score=277.0]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=247, Expect=6e-76]} {Mouse: ENSMUSG00000042248, Cyp2c37, cytochrome P450, family 2. subfamily c, polypeptide 37, [Score=229, Expect=2e-69]; ENSMUSG00000067231, Cyp2c65, cytochrome P450, family 2, subfamily c, polypeptide 65, [Score=224, Expect=2e-67]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=223, Expect=6e-67]; ENSMUSG00000054827, Cyp2c50, cytochrome P450, family 2, subfamily c, polypeptide 50, [Score=223, Expect=3e-67]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=222, Expect=1e-66]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=221, Expect=4e-66]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=219, Expect=3e-65]; ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=219, Expect=1e-65]; ENSMUSG00000003053, Cyp2c29, cytochrome P450, family 2, subfamily c, polypeptide 29, [Score=219, Expect=1e-65]; ENSMUSG00000025003, Cyp2c39, cytochrome P450, family 2, subfamily c, polypeptide 39, [Score=218, Expect=4e-65]; ENSMUSG00000067229, Cyp2c66, cytochrome P450, family 2, subfamily c, polypeptide 66, [Score=218, Expect=3e-65]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=185, Expect=2e-52]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=206, Expect=7e-61]} {Smed: dd_Smed_v6_4449_0_1, dd_Smed_v6_4449_0_1, [Score=218, Expect=3e-65]} {RNA1509_32472} {RNA1310_10280} {RNA815_4805}
8. MligTC455_21949 42 0.88 Mlig455_011909

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.149

 0.981 - - - - 0.981 - Mlig455_011909 {REF} {Length: 2730} {RNA1509_59141} {RNA1310_57197} {RNA815_37903}
9. MligTC455_00508 5 0.11 Mlig455_052331

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_052331 {REF} {Length: 190} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_66135} {RNA815_38923}
10. MligTC455_53883 7 0.15 Mlig455_032567

Neo: -

Age: Up-Down-Up

 PRIMPOL 0.98 - - - - 0.980 - Mlig455_032567 {REF} {Length: 3117} {TRANSSPLICED} {Pfam: Herpesviridae UL52/UL70 DNA primase [PF03121.17, score=40.3]} {Human: ENSG00000164306, PRIMPOL, primase and DNA directed polymerase, [Score=105, Expect=9e-24]} {Mouse: ENSMUSG00000038225, Primpol, primase and polymerase (DNA-directed), [Score=120, Expect=3e-29]} {RNA1310_43496} {RNA815_46866}
11. MligTC455_54834 8 0.16 Mlig455_037179

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_037179 {REF} {Length: 202} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_66135} {RNA815_38923}
12. MligTC455_01939 5 0.11 Mlig455_014461

Neo: -

Age: Up-Down-Down

 0.979 - - - - 0.979 - Mlig455_014461 {REF} {Length: 3042} {RNA1310_63926} {RNA815_36221}
13. MligTC455_09488 2 0.03 Mlig455_010893

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_010893 {REF} {Length: 632} {NoTransDecoderORF} {RNA1310_115414} {RNA815_63829}
14. MligTC455_09818 17 0.35 Mlig455_044853

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.929

 OSR2 0.979 - - - - 0.979 - Mlig455_044853 {REF} {Length: 2319} {Pfam: Zinc-finger double domain [PF13465.8, score=48.4]; Zinc finger, C2H2 type [PF00096.28, score=43.3]; C2H2-type zinc finger [PF13894.8, score=31.9]; C2H2-type zinc finger [PF13912.8, score=19.6]} {Human: ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [Score=141, Expect=1e-40]; ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [Score=140, Expect=2e-40]} {Mouse: ENSMUSG00000022330, Osr2, odd-skipped related 2, [Score=141, Expect=1e-40]; ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [Score=140, Expect=1e-40]} {Dmel: FBgn0004892, sob, sister of odd and bowl, [Score=142, Expect=3e-39]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [Score=150, Expect=8e-45]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [Score=151, Expect=7e-45]} {RNA1509_28642} {RNA1310_40286} {RNA815_48894}
15. MligTC455_26391 2 0.05 Mlig455_042080

Neo: Irradiation

Age: -

 CSDE1 0.979 - - - - 0.979 - Mlig455_042080 {REF} {Length: 2190} {TRANSSPLICED} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=69.0]; S1-like [PF14444.8, score=20.7]} {Human: ENSG00000009307, CSDE1, cold shock domain containing E1, [RH, Score=166, Expect=4e-43]} {Mouse: ENSMUSG00000068823, Csde1, cold shock domain containing E1, RNA binding, [RH, Score=163, Expect=2e-42]} {Dmel: FBgn0263352, Unr, Upstream of N-ras, [RH, Score=167, Expect=2e-43]} {Smed: dd_Smed_v6_598_0_1, dd_Smed_v6_598_0_1, [RH, Score=174, Expect=2e-46]} {RNA1509_29791} {RNA1310_5877} {RNA815_2002}
16. MligTC455_32634 3 0.06 Mlig455_006255

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_006255 {REF} {Length: 401} {RNA1509_41966} {RNA1310_20375} {RNA815_18013.1}
17. MligTC455_53881 39 0.81 Mlig455_032561

Neo: -

Age: -

 PRIMPOL 0.978 - - - - 0.978 - Mlig455_032561 {REF} {Length: 2904} {TRANSSPLICED} {Pfam: Herpesviridae UL52/UL70 DNA primase [PF03121.17, score=39.0]} {Human: ENSG00000164306, PRIMPOL, primase and DNA directed polymerase, [RH, Score=144, Expect=5e-37]} {Mouse: ENSMUSG00000038225, Primpol, primase and polymerase (DNA-directed), [RH, Score=144, Expect=3e-37]} {RNA1310_43496} {RNA815_46866}
18. MligTC455_18941 24 0.5 Mlig455_001833, Mlig455_062225

Neo: -

Age: -

 0.977 - - - - 0.977 -

Mlig455_001833 {REF} {Length: 226} {NoTransDecoderORF} {RNA1509_59635} {RNA1310_47855} {RNA815_26284}

Mlig455_062225 {REF} {Length: 283} {NoTransDecoderORF} {RNA1509_34461} {RNA1310_47855} {RNA815_26284}
19. MligTC455_31471 4 0.09 Mlig455_011520

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_011520 {REF} {Length: 568} {RNA1310_43113} {RNA815_26397}
20. MligTC455_56574 3 0.07 Mlig455_038692

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_038692 {REF} {Length: 654} {Pfam: Peptidase M15 [PF08291.13, score=23.9]; DEK C terminal domain [PF08766.13, score=22.9]}
21. MligTC455_11166 137 2.85 Mlig455_001472

Neo: -

Age: Up-Up-Down

 0.974 - - - - 0.974 - Mlig455_001472 {REF} {Length: 3543} {Pfam: Beta-lactamase [PF00144.26, score=76.3]} {RNA1509_17855} {RNA1310_14062, RNA1509_17855} {RNA1509_17855, RNA815_7859}
22. MligTC455_15138 5 0.1 Mlig455_067271

Neo: -

Age: -

 CNGA3 0.974 - - - - 0.974 - Mlig455_067271 {REF} {Length: 2167} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=62.8]; Ion transport protein [PF00520.33, score=39.2]} {Human: ENSG00000144191, CNGA3, cyclic nucleotide gated channel alpha 3, [Score=354, Expect=2e-114]; ENSG00000198515, CNGA1, cyclic nucleotide gated channel alpha 1, [Score=345, Expect=4e-111]; ENSG00000183862, CNGA2, cyclic nucleotide gated channel alpha 2, [Score=343, Expect=9e-111]} {Mouse: ENSMUSG00000026114, Cnga3, cyclic nucleotide gated channel alpha 3, [Score=354, Expect=2e-115]; ENSMUSG00000067220, Cnga1, cyclic nucleotide gated channel alpha 1, [Score=344, Expect=9e-111]; ENSMUSG00000005864, Cnga2, cyclic nucleotide gated channel alpha 2, [Score=342, Expect=2e-110]} {Dmel: FBgn0259145, CG42260, [Score=468, Expect=1e-155]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=288, Expect=5e-89]} {Smed: dd_Smed_v6_22398_0_1, dd_Smed_v6_22398_0_1, [Score=350, Expect=6e-114]} {RNA1310_120793} {RNA815_25814}
23. MligTC455_28433 44 0.92 Mlig455_039556, Mlig455_051361

Neo: -

Age: -

 0.97 - - - - 0.970 -

Mlig455_039556 {REF} {Length: 3654} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=33.4]} {RNA1509_33160} {RNA1310_6176.1} {RNA815_7664}

Mlig455_051361 {REF} {Length: 2240} {Smed: dd_Smed_v6_17002_0_4, dd_Smed_v6_17002_0_4, [Score=60.8, Expect=1e-09]} {RNA1509_33160} {RNA1310_6176.1} {RNA815_7664}
24. MligTC455_06417 12 0.25 Mlig455_007485

Neo: Germline

Age: -

Region-enriched R4: 6.157/0.01177

 0.969 - - - - 0.969 - Mlig455_007485 {REF} {Length: 3055} {Pfam: KH domain [PF00013.31, score=20.5]} {RNA1509_34412, RNA1509_58238} {RNA1310_8069, RNA1509_58238} {RNA1509_58238, RNA815_3579}
25. MligTC455_07573 4 0.09 Mlig455_040246, Mlig455_054706

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.444

 0.969 - - - - 0.969 -

Mlig455_040246 {REF} {Length: 1717} {RNA1509_56062} {RNA1310_32916.1} {RNA815_40881}

Mlig455_054706 {REF} {Length: 3750} {RNA1310_32916.1} {RNA815_40664}
26. MligTC455_35980 2 0.05 Mlig455_045682

Neo: -

Age: Up-Down-Up

 0.969 - - - - 0.969 - Mlig455_045682 {REF} {Length: 2311} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=62.4]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=30.0]; PHD-finger [PF00628.31, score=21.0]} {RNA1509_14534} {RNA1310_6404, RNA1509_14534} {RNA1509_14534, RNA815_43535}
27. MligTC455_25925 19 0.39 Mlig455_010198

Neo: -

Age: -

 RP2 0.968 - - - - 0.968 - Mlig455_010198 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=63.4]; Tubulin binding cofactor C [PF07986.14, score=21.9]} {Human: ENSG00000102218, RP2, RP2, ARL3 GTPase activating protein, [Score=66.6, Expect=3e-12]} {Mouse: ENSMUSG00000060090, Rp2, retinitis pigmentosa 2 homolog, [Score=67.0, Expect=2e-12]} {Smed: dd_Smed_v6_16959_0_1, dd_Smed_v6_16959_0_1, [Score=70.9, Expect=7e-14]} {RNA1509_23957} {RNA1310_8686} {RNA815_54300}
28. MligTC455_13820 10 0.21 Mlig455_030340

Neo: -

Age: logFC(26M/2M)=-0.872

 0.967 - - - - 0.967 - Mlig455_030340 {REF} {Length: 486} {NoTransDecoderORF} {RNA1310_26756} {RNA815_28619}
29. MligTC455_23822 11 0.24 Mlig455_067694

Neo: -

Age: logFC(26M/2M)=2.969

 FOXF1 0.967 - - - - 0.967 - Mlig455_067694 {REF} {Length: 2951} {Pfam: Forkhead domain [PF00250.20, score=122.0]} {Human: ENSG00000103241, FOXF1, forkhead box F1, [Score=175, Expect=8e-51]; ENSG00000137273, FOXF2, forkhead box F2, [Score=173, Expect=1e-49]} {Mouse: ENSMUSG00000038402, Foxf2, forkhead box F2, [Score=174, Expect=6e-50]; ENSMUSG00000042812, Foxf1, forkhead box F1, [Score=173, Expect=2e-50]} {Dmel: FBgn0045759, bin, biniou, [RH, Score=157, Expect=1e-42]} {Celegans: WBGene00002601, let-381, [RH, Score=170, Expect=2e-49]} {Smed: dd_Smed_v6_15035_0_1, dd_Smed_v6_15035_0_1, [RH, Score=169, Expect=5e-51]} {RNA1509_14169} {RNA1310_28087} {RNA815_25988}
30. MligTC455_00803 21 0.43 Mlig455_065036

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_065036 {REF} {Length: 595} {NoTransDecoderORF} {RNA1310_113177.1}
31. MligTC455_03349 160 3.34 Mlig455_059510

Neo: -

Age: -

 PPCS 0.964 - - - - 0.964 - Mlig455_059510 {REF} {Length: 3149} {TRANSSPLICED} {Pfam: DNA / pantothenate metabolism flavoprotein [PF04127.17, score=56.3]} {Human: ENSG00000127125, PPCS, phosphopantothenoylcysteine synthetase, [RH, Score=217, Expect=1e-68]} {Mouse: ENSMUSG00000028636, Ppcs, phosphopantothenoylcysteine synthetase, [RH, Score=191, Expect=1e-58]} {Dmel: FBgn0261285, Ppcs, Phosphopantothenoylcysteine synthetase, [RH, Score=199, Expect=5e-62]} {Celegans: WBGene00022171, Y71H2AM.6, [RH, Score=182, Expect=5e-56]} {Smed: dd_Smed_v6_9697_0_1, dd_Smed_v6_9697_0_1, [RH, Score=220, Expect=3e-70]} {RNA1509_27184} {RNA1310_20396, RNA1509_27184} {RNA1509_27184, RNA815_15075}
32. MligTC455_05686 18 0.38 Mlig455_040578, Mlig455_040661

Neo: -

Age: -

 FCN2 0.963 - - - - 0.963 -

Mlig455_040578 {REF} {Length: 1086} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=151.0]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=136, Expect=6e-38]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=129, Expect=1e-33]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=127, Expect=2e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=125, Expect=2e-32]; ENSMUSG00000026938, Fcna, ficolin A, [Score=124, Expect=6e-33]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=123, Expect=9e-32]} {Dmel: FBgn0034160, CG5550, [Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=54.7, Expect=1e-09]} {RNA1509_26827} {RNA1310_33619.1} {RNA815_17173.3}

Mlig455_040661 {REF} {Length: 1086} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=151.0]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=136, Expect=6e-38]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=129, Expect=1e-33]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=127, Expect=2e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=125, Expect=2e-32]; ENSMUSG00000026938, Fcna, ficolin A, [Score=124, Expect=6e-33]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=123, Expect=9e-32]} {Dmel: FBgn0034160, CG5550, [Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=54.7, Expect=1e-09]} {RNA1509_26827} {RNA1310_33619.1} {RNA815_17173.3}
33. MligTC455_10333 9 0.19 Mlig455_039999

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_039999 {REF} {Length: 405} {TRANSSPLICED} {NoTransDecoderORF}
34. MligTC455_17271 2 0.04 Mlig455_025737, Mlig455_064425

Neo: -

Age: Up-Down-Up

 MAP3K3 0.963 - - - - 0.963 -

Mlig455_025737 {REF} {Length: 2348} {Pfam: Protein kinase domain [PF00069.27, score=233.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=151.9]; Fungal protein kinase [PF17667.3, score=25.1]; Kinase-like [PF14531.8, score=23.9]; ABC1 atypical kinase-like domain [PF03109.18, score=20.2]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [Score=310, Expect=9e-99]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [Score=295, Expect=5e-93]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [Score=306, Expect=1e-97]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [Score=292, Expect=3e-92]} {Dmel: FBgn0024329, Mekk1, [Score=166, Expect=6e-44]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=168, Expect=9e-46]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [Score=261, Expect=8e-81]} {RNA1509_34435} {RNA1310_8418.1} {RNA815_5510}

Mlig455_064425 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.4]; PB1 domain [PF00564.26, score=24.9]; Fungal protein kinase [PF17667.3, score=22.9]; Kinase-like [PF14531.8, score=20.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=6e-105]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=341, Expect=1e-103]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=338, Expect=6e-103]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=336, Expect=5e-102]} {Dmel: FBgn0024329, Mekk1, [Score=163, Expect=3e-40]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=166, Expect=3e-41]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=281, Expect=1e-82]} {RNA1509_34435} {RNA1310_8418.1} {RNA815_5510}
35. MligTC455_42043 105 2.19 Mlig455_001159

Neo: -

Age: Down-Up-Down

Regeneration-downregulated R5: -5.440

Regeneration-depleted R5: -5.440

 0.963 - - - - 0.963 - Mlig455_001159 {REF} {Length: 641} {NoTransDecoderORF} {RNA1509_40090} {RNA1310_51492, RNA1509_40090} {RNA1509_40090, RNA815_59648}
36. MligTC455_51311 17 0.36 Mlig455_003546

Neo: -

Age: Up-Down-Down

 TRPC4 0.963 - - - - 0.963 - Mlig455_003546 {REF} {Length: 3667} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=175, Expect=1e-48]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=173, Expect=3e-48]; ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=166, Expect=7e-46]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=210, Expect=2e-61]} {Celegans: WBGene00006615, trp-2, TRP (Transient receptor potential) channel family; TRP homlogous cation channel protein, [Score=131, Expect=5e-34]} {Smed: dd_Smed_v6_15627_0_2, dd_Smed_v6_15627_0_2, [Score=251, Expect=1e-79]} {RNA1509_39535} {RNA1310_51104} {RNA815_28901}
37. MligTC455_14404 6 0.13 Mlig455_019335, Mlig455_019449

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_019335 {REF} {Length: 817} {NoTransDecoderORF} {RNA1509_12552} {RNA1310_11146.1} {RNA815_9855}

Mlig455_019449 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_12552} {RNA1310_11146.1} {RNA815_9855}
38. MligTC455_09261 26 0.54 Mlig455_009012, Mlig455_016551, Mlig455_016607

Neo: -

Age: Up-Down-Down

 TXNDC16 0.961 - - - - 0.961 -

Mlig455_009012 {REF} {Length: 3149} {Pfam: Thioredoxin [PF00085.22, score=49.1]} {Human: ENSG00000087301, TXNDC16, thioredoxin domain containing 16, [RH, Score=57.0, Expect=1e-07]} {Dmel: FBgn0036579, CG5027, [Score=50.4, Expect=5e-06]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=50.1, Expect=6e-06]} {RNA1509_55756} {RNA1310_28093, RNA1509_55756} {RNA1509_55756, RNA815_21123}

Mlig455_016551 {REF} {Length: 1631} {Pfam: Thioredoxin [PF00085.22, score=50.4]} {Human: ENSG00000087301, TXNDC16, thioredoxin domain containing 16, [RH, Score=56.6, Expect=9e-08]} {Dmel: FBgn0036579, CG5027, [Score=50.1, Expect=4e-06]} {Celegans: WBGene00022836, ZK973.11, [Score=48.5, Expect=8e-06]} {RNA1509_55756} {RNA1310_28093} {RNA815_31908}

Mlig455_016607 {REF} {Length: 2795} {Pfam: Thioredoxin [PF00085.22, score=49.6]} {Human: ENSG00000087301, TXNDC16, thioredoxin domain containing 16, [Score=57.0, Expect=1e-07]} {Dmel: FBgn0036579, CG5027, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00022836, ZK973.11, [Score=49.7, Expect=5e-06]} {RNA1509_55756} {RNA1310_40280} {RNA815_21123}
39. MligTC455_19699 114 2.37 Mlig455_012898

Neo: -

Age: -

 GHDC 0.961 - - - - 0.961 - Mlig455_012898 {REF} {Length: 2514} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=338.2]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [RH, Score=81.6, Expect=1e-15]} {RNA1509_16783, RNA1509_23182} {RNA1310_1835.1, RNA1509_16783, RNA1509_23182} {RNA1509_16783, RNA1509_23182, RNA815_4021}
40. MligTC455_12200 402 8.38 Mlig455_056707, Mlig455_060314

Neo: -

Age: Down-Up-Up

Region-enriched R3: 6.181/0.00003
Region-enriched R4: 4.726/0.01199

 0.959 - - - - 0.959 -

Mlig455_056707 {REF} {Length: 1565} {RNA1509_33681} {RNA1310_21613} {RNA815_8987.1}

Mlig455_060314 {REF} {Length: 1642} {RNA1509_33681} {RNA1310_21613, RNA1509_33681} {RNA1509_33681, RNA815_8987.1}
41. MligTC455_22766 6 0.12 Mlig455_026106

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_026106 {REF} {Length: 1621} {RNA1509_5216} {RNA1310_70201} {RNA815_7910}
42. MligTC455_20280 19 0.4 Mlig455_038333

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_038333 {REF} {Length: 4634} {RNA1509_41110} {RNA1310_4694.1} {RNA815_28840}
43. MligTC455_25939 5 0.11 Mlig455_034890

Neo: -

Age: -

 PIF1 0.957 - - - - 0.957 - Mlig455_034890 {REF} {Length: 3059} {Pfam: PIF1-like helicase [PF05970.16, score=327.0]; AAA domain [PF13604.8, score=49.1]; Helicase [PF02689.16, score=23.9]; UvrD-like helicase C-terminal domain [PF13538.8, score=21.4]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=97.8, Expect=1e-20]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=92.8, Expect=3e-19]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=91.3, Expect=7e-19]} {Celegans: WBGene00018020, F33H12.6, [Score=320, Expect=1e-95]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=2e-23]} {RNA1509_48797} {RNA1310_18036.1} {RNA815_358.1}
44. MligTC455_03307 7 0.15 Mlig455_046350

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_046350 {REF} {Length: 438} {NoTransDecoderORF} {RNA1310_66730}
45. MligTC455_22169 8 0.17 Mlig455_056662

Neo: -

Age: -

 OSGEP 0.956 - - - - 0.956 - Mlig455_056662 {REF} {Length: 1733} {TRANSSPLICED} {Pfam: tRNA N6-adenosine threonylcarbamoyltransferase [PF00814.27, score=284.0]; mRNA cleavage and polyadenylation factor CLP1 P-loop [PF16575.7, score=64.6]; AAA ATPase domain [PF13191.8, score=19.2]} {Human: ENSG00000092094, OSGEP, O-sialoglycoprotein endopeptidase, [Score=485, Expect=1e-170]} {Mouse: ENSMUSG00000006289, Osgep, O-sialoglycoprotein endopeptidase, [Score=486, Expect=4e-171]} {Dmel: FBgn0283681, Tcs3, [Score=457, Expect=5e-160]} {Celegans: WBGene00022166, Y71H2AM.1, Probable tRNA N6-adenosine threonylcarbamoyltransferase, [Score=436, Expect=6e-152]} {Smed: dd_Smed_v6_3150_0_1, dd_Smed_v6_3150_0_1, [RH, Score=474, Expect=1e-166]} {RNA1509_6538} {RNA1310_17345.2} {RNA815_14057}
46. MligTC455_49535 895 18.65 Mlig455_024625

Neo: -

Age: logFC(26M/2M)=-1.609

 0.953 - - - - 0.953 - Mlig455_024625 {REF} {Length: 1535} {RNA1509_49451} {RNA1310_38040, RNA1509_49451} {RNA1509_49451, RNA815_20332}
47. MligTC455_07212 41 0.85 Mlig455_020125

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_020125 {REF} {Length: 949} {TRANSSPLICED} {RNA1509_32443, RNA1509_51241} {RNA1310_24373, RNA1509_32443, RNA1509_51241} {RNA1509_32443, RNA1509_51241, RNA815_57461}
48. MligTC455_12756 117 2.44 Mlig455_036000

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_036000 {REF} {Length: 1329} {RNA1509_5640} {RNA1310_31330} {RNA815_4830.1}
49. MligTC455_46729 214 4.45 Mlig455_024617

Neo: Int S/G2/M

Age: -

 0.951 - - - - 0.951 - Mlig455_024617 {REF} {Length: 2532} {TRANSSPLICED} {RNA1509_48335} {RNA1310_40748, RNA1509_48335} {RNA1509_48335, RNA815_27560}
50. MligTC455_49537 384 7.99 Mlig455_024639

Neo: -

Age: Down-Down-Up

 0.951 - - - - 0.951 - Mlig455_024639 {REF} {Length: 1495} {RNA1509_49451} {RNA1310_38040} {RNA815_20332}
51. MligTC455_18678 344 7.16 Mlig455_004124, Mlig455_060449, Mlig455_060490

Neo: -

Age: -

Region-enriched R3: 5.638/0.00745

 0.95 - - - - 0.950 -

Mlig455_004124 {REF} {Length: 1389} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=27.1]} {RNA1310_26957} {RNA815_11864}

Mlig455_060449 {REF} {Length: 1378} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=27.1]} {RNA1310_26957} {RNA815_11864}

Mlig455_060490 {REF} {Length: 1226} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=27.1]} {RNA1310_26957} {RNA815_11864}
52. MligTC455_23635 11 0.22 Mlig455_067931

Neo: Germline

Age: -

 0.95 - - - - 0.950 - Mlig455_067931 {REF} {Length: 2254} {RNA1509_46642} {RNA1310_7864} {RNA815_30316}
53. MligTC455_33894 19 0.39 Mlig455_019045

Neo: Int S/G2/M

Age: Up-Up-Down

 TEX14 0.95 - - - - 0.950 - Mlig455_019045 {REF} {Length: 6217} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=70.7]; Protein kinase domain [PF00069.27, score=63.3]; Ankyrin repeats (many copies) [PF13637.8, score=53.9]; Ankyrin repeat [PF00023.32, score=51.5]; Ankyrin repeats (3 copies) [PF12796.9, score=50.0]; Ankyrin repeats (many copies) [PF13857.8, score=32.3]; Ankyrin repeat [PF13606.8, score=32.1]} {Human: ENSG00000121101, TEX14, testis expressed 14, intercellular bridge forming factor, [RH, Score=171, Expect=4e-42]} {Mouse: ENSMUSG00000010342, Tex14, testis expressed gene 14, [RH, Score=169, Expect=2e-41]} {Dmel: FBgn0036801, MYPT-75D, [Score=68.2, Expect=5e-11]} {Celegans: WBGene00000565, cnt-1, Arf-GAP with ANK repeat and PH domain-containing protein cnt-1 Truncated ctn-1, [RH, Score=69.3, Expect=5e-12]} {Smed: dd_Smed_v6_2782_0_1, dd_Smed_v6_2782_0_1, [Score=63.9, Expect=1e-10]} {RNA1509_12042} {RNA1310_1137.2} {RNA815_6538}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA