TomoSeq data search

Data search

Results for MligTC455_07411

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_07411

19

0.39

Mlig455_024512

Neo: -

Age: -

Mlig455_024512 {REF} {Length: 1125} {NoTransDecoderORF} {RNA1310_46833}

Cumulative graph for MligTC455_07411

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.024	0.572	0.99992	1.00000
RegionR2	1.021	0.572	0.99991	1.00000
RegionR3	-0.411	0.572	0.99992	1.00000
RegionR4	-1.377	0.572	0.99985	1.00000
RegionR5	-1.117	0.572	0.99997	1.00000
RegionR6	-0.686	0.572	0.99996	1.00000
RegionR7	0.945	0.572	0.99996	1.00000
RegionR8	1.648	0.572	0.99994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.6	0.572	0.99994	1.00000
RegenerationR2	1.848	0.572	0.99985	1.00000
RegenerationR3	0.507	0.572	0.99996	1.00000
RegenerationR4	-0.38	0.572	0.99991	1.00000
RegenerationR5	0.656	0.572	0.99966	1.00000
RegenerationR6	2.014	0.572	0.99952	1.00000
RegenerationBL	2.846	0.572	0.99955	1.00000
RegenerationTP	-0.994	0.572	0.99996	1.00000

Genes with expression patterns similar to MligTC455_07411

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_07411	19	0.39	Mlig455_024512	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_024512 {REF} {Length: 1125} {NoTransDecoderORF} {RNA1310_46833}
2.	MligTC455_49768	145	3.02	Mlig455_004270	Neo: - Age: Up-Down-Down	ANOS1	0.981	-	-	-	-	0.981	-	Mlig455_004270 {REF} {Length: 4160} {Pfam: Fibronectin type III domain [PF00041.23, score=82.4]} {Human: ENSG00000011201, ANOS1, anosmin 1, [Score=108, Expect=2e-23]} {Dmel: FBgn0039155, Kal1, Kallmann syndrome 1, [Score=79.3, Expect=8e-15]} {Celegans: WBGene00002181, kal-1, KALlmann syndrome homolog, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_10075_0_1, dd_Smed_v6_10075_0_1, [Score=176, Expect=3e-45]} {RNA1509_44032} {RNA1310_20852} {RNA815_15013}
3.	MligTC455_33441	27	0.55	Mlig455_068537	Neo: - Age: Down-Up-Down	GRID1	0.979	-	-	-	-	0.979	-	Mlig455_068537 {REF} {Length: 3049} {Pfam: Ligand-gated ion channel [PF00060.28, score=77.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=46.3]; Receptor family ligand binding region [PF01094.30, score=43.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=156, Expect=6e-39]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=153, Expect=1e-37]} {Dmel: FBgn0038837, CG3822, [Score=125, Expect=4e-29]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=117, Expect=8e-27]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=259, Expect=3e-78]} {RNA1310_13880.2} {RNA815_12458}
4.	MligTC455_43789	48	0.99	Mlig455_029925	Neo: - Age: -	FARP1	0.979	-	-	-	-	0.979	-	Mlig455_029925 {REF} {Length: 2354} {Pfam: PH domain [PF00169.31, score=54.9]; RhoGEF domain [PF00621.22, score=25.8]} {Human: ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [Score=151, Expect=7e-38]; ENSMUSG00000025555, Farp1, FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived), [Score=149, Expect=3e-37]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=118, Expect=2e-27]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=91.7, Expect=3e-19]} {Smed: dd_Smed_v6_14700_0_1, dd_Smed_v6_14700_0_1, [Score=154, Expect=2e-39]} {RNA1509_30091} {RNA1310_43814.1} {RNA815_20350}
5.	MligTC455_33725	46	0.96	Mlig455_059862	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
6.	MligTC455_51473	175	3.64	Mlig455_033087	Neo: - Age: Up-Down-Up	LITAF	0.977	-	-	-	-	0.977	-	Mlig455_033087 {REF} {Length: 2038} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=90.8]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [Score=75.5, Expect=6e-17]; ENSG00000274336, CDIP1, cell death inducing p53 target 1, [Score=73.9, Expect=3e-16]; ENSG00000089486, CDIP1, cell death inducing p53 target 1, [Score=73.9, Expect=3e-16]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=79.3, Expect=1e-18]} {Dmel: FBgn0052280, CG32280, [Score=72.0, Expect=3e-16]} {Celegans: WBGene00009484, F36G3.3, [Score=65.5, Expect=9e-14]} {Smed: dd_Smed_v6_26606_0_1, dd_Smed_v6_26606_0_1, [RH, Score=84.0, Expect=2e-21]} {RNA1310_45914} {RNA815_12450}
7.	MligTC455_20956	77	1.6	Mlig455_008761	Neo: - Age: Up-Down-Down Region-enriched R8: 3.712/0.03504	GLRA3	0.976	-	-	-	-	0.976	-	Mlig455_008761 {REF} {Length: 3739} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=146.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=124.8]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=344, Expect=7e-114]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=338, Expect=2e-111]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=342, Expect=5e-113]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=336, Expect=7e-111]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=291, Expect=2e-93]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=256, Expect=7e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=253, Expect=1e-78]} {RNA1310_38552.1} {RNA815_6481}
8.	MligTC455_15460	271	5.65	Mlig455_001644, Mlig455_001708	Neo: - Age: - Region-enriched R8: 3.592/0.03504 Region-enriched R7: 3.324/0.02643		0.975	-	-	-	-	0.975	-	Mlig455_001644 {REF} {Length: 1595} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=28.7]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [Score=137, Expect=2e-36]} {RNA1509_56048} {RNA1310_10124} {RNA815_17803} Mlig455_001708 {REF} {Length: 2658} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=151.7]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_28097_0_1, dd_Smed_v6_28097_0_1, [Score=332, Expect=4e-107]} {RNA1509_56048} {RNA1310_10124, RNA1509_56048} {RNA1509_56048, RNA815_17803}
9.	MligTC455_13795	10	0.22	Mlig455_049344	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_049344 {REF} {Length: 485} {NoTransDecoderORF} {RNA1310_71916}
10.	MligTC455_16815	51	1.07	Mlig455_038730	Neo: - Age: -	KCNC1	0.97	-	-	-	-	0.970	-	Mlig455_038730 {REF} {Length: 3802} {Pfam: Ion transport protein [PF00520.33, score=148.9]; BTB/POZ domain [PF02214.24, score=99.7]; Ion channel [PF07885.18, score=45.1]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=425, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=425, Expect=2e-141]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=404, Expect=7e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=425, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=2e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=697, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=594, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=686, Expect=0.0]} {RNA1310_23163} {RNA815_9933.1}
11.	MligTC455_17809	89	1.85	Mlig455_066801, Mlig455_066865	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_066801 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.4]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.2, Expect=3e-06]} {RNA1310_22785} {RNA815_13697} Mlig455_066865 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.2]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.6, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}
12.	MligTC455_08352	14	0.29	Mlig455_017214	Neo: Irradiation Age: Down-Down-Up	APEX1	0.965	-	-	-	-	0.965	-	Mlig455_017214 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.4]; Endonuclease-reverse transcriptase [PF14529.8, score=24.9]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=310, Expect=1e-102]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=302, Expect=3e-95]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=238, Expect=3e-75]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=338, Expect=8e-114]} {RNA1509_16413} {RNA1310_25554} {RNA815_11218.1}
13.	MligTC455_10297	15	0.32	Mlig455_015788	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_015788 {REF} {Length: 484} {NoTransDecoderORF} {RNA1509_25850} {RNA1310_7880} {RNA815_2645}
14.	MligTC455_36762	10	0.21	Mlig455_057461	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_057461 {REF} {Length: 1806} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=24.8]} {Smed: dd_Smed_v6_38501_0_1, dd_Smed_v6_38501_0_1, [Score=155, Expect=6e-43]}
15.	MligTC455_43611	93	1.94	Mlig455_047359, Mlig455_047360	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_047359 {REF} {Length: 707} {NoTransDecoderORF} {RNA1310_133647} Mlig455_047360 {REF} {Length: 911} {NoTransDecoderORF} {RNA1310_133647}
16.	MligTC455_19759	18	0.39	Mlig455_002694, Mlig455_002710	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458} Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}
17.	MligTC455_44612	24	0.49	Mlig455_006206, Mlig455_059294	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_006206 {REF} {Length: 506} {NoTransDecoderORF} {RNA1509_43593} {RNA1310_56719} {RNA815_29718} Mlig455_059294 {REF} {Length: 1181} {Pfam: PAN domain [PF00024.28, score=19.3]} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=66.2, Expect=3e-13]} {RNA1509_35604} {RNA1310_34182} {RNA815_29718}
18.	MligTC455_29808	204	4.26	Mlig455_056288	Neo: Int S/G2/M Age: - Region-enriched R4: 3.556/0.04090	MCM3AP	0.953	-	-	-	-	0.953	-	Mlig455_056288 {REF} {Length: 6365} {Pfam: SAC3/GANP family [PF03399.18, score=315.0]} {Human: ENSG00000160294, MCM3AP, minichromosome maintenance complex component 3 associated protein, [RH, Score=330, Expect=2e-91]} {Mouse: ENSMUSG00000001150, Mcm3ap, minichromosome maintenance complex component 3 associated protein, [RH, Score=328, Expect=7e-91]} {Dmel: FBgn0028974, xmas-2, [RH, Score=289, Expect=3e-79]} {Celegans: WBGene00017642, F20D12.2, [RH, Score=210, Expect=7e-55]} {Smed: dd_Smed_v6_10065_0_1, dd_Smed_v6_10065_0_1, [RH, Score=273, Expect=3e-75]} {RNA1509_12513} {RNA1310_1606} {RNA815_453.1}

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