M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_07578

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07578 52 1.09 Mlig455_063097

Neo: -

Age: -

 Mlig455_063097 {REF} {Length: 685} {NoTransDecoderORF} {RNA1310_96762}

Cumulative graph for MligTC455_07578

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.449 1.317 0.99975 1.00000
RegionR2 3.997 1.317 0.99981 1.00000
RegionR3 1.541 1.317 0.99992 1.00000
RegionR4 -2.817 1.317 0.99974 1.00000
RegionR5 0.357 1.317 0.99996 1.00000
RegionR6 1.31 1.317 0.99994 1.00000
RegionR7 1.188 1.317 0.99992 1.00000
RegionR8 -0.126 1.317 0.99998 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.57 1.317 0.99993 1.00000
RegenerationR2 4.412 1.317 0.00136 0.05528
RegenerationR3 6.044 1.317 0.00140 0.06135
RegenerationR4 5.42 1.317 0.00171 0.05064
RegenerationR5 3.574 1.317 0.01940 0.24061
RegenerationR6 5.504 1.317 0.00224 0.05376
RegenerationBL 1.855 1.317 0.44229 0.80932
RegenerationTP 6.538 1.317 0.00565 0.12612


Genes with expression patterns similar to MligTC455_07578

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07578 52 1.09 Mlig455_063097

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_063097 {REF} {Length: 685} {NoTransDecoderORF} {RNA1310_96762}
2. MligTC455_17477 47 0.98 Mlig455_053346

Neo: -

Age: -

 1.882 - - - - 0.952 0.930 Mlig455_053346 {REF} {Length: 2041} {RNA1509_20382} {RNA1310_59327} {RNA815_58492}
3. MligTC455_38630 121 2.51 Mlig455_043227, Mlig455_045506, Mlig455_049669

Neo: -

Age: -

 1.873 - - - 0.914 0.959 -

Mlig455_043227 {REF} {Length: 228} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_24332} {RNA815_21848}

Mlig455_045506 {REF} {Length: 771} {RNA1509_40552} {RNA1310_97623} {RNA815_43995.1}

Mlig455_049669 {REF} {Length: 690} {RNA1509_57867} {RNA1310_1374.1} {RNA815_21848}
4. MligTC455_11790 15 0.31 Mlig455_015005

Neo: -

Age: -

 1.872 - - - 0.974 0.898 - Mlig455_015005 {REF} {Length: 1166} {NoTransDecoderORF} {RNA1310_139123}
5. MligTC455_49870 86 1.8 Mlig455_028362, Mlig455_067454, Mlig455_067455

Neo: -

Age: -

 CHRM1, CHRM4 1.765 - - - 0.805 0.960 -

Mlig455_028362 {REF} {Length: 3223} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=40.4]} {Human: ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=98.2, Expect=2e-21]; ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=94.7, Expect=3e-20]} {Mouse: ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=97.4, Expect=2e-21]; ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=94.7, Expect=2e-20]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=136, Expect=5e-34]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=128, Expect=4e-33]} {Smed: dd_Smed_v6_37337_0_1, dd_Smed_v6_37337_0_1, [RH, Score=149, Expect=1e-42]} {RNA1310_12338} {RNA815_37088}

Mlig455_067454 {REF} {Length: 1188} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=103.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=29.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=27.2]} {Human: ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=102, Expect=2e-23]; ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=97.1, Expect=1e-21]} {Mouse: ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=103, Expect=6e-24]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=189, Expect=1e-53]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [Score=133, Expect=3e-34]} {Smed: dd_Smed_v6_24759_0_1, dd_Smed_v6_24759_0_1, [Score=225, Expect=7e-69]} {RNA1310_12338} {RNA815_52171}

Mlig455_067455 {REF} {Length: 2697} {RNA1310_12338} {RNA815_37088}
6. MligTC455_43505 695 14.47 Mlig455_055275

Neo: -

Age: logFC(26M/2M)=0.254

 0.988 - - - 0.988 - - Mlig455_055275 {REF} {Length: 1014} {Pfam: Winged helix-turn-helix [PF14947.8, score=19.3]} {RNA1509_17222} {RNA1310_44913.2} {RNA815_37256}
7. MligTC455_52549 150 3.12 Mlig455_002138, Mlig455_002284

Neo: -

Age: -

Regeneration-depleted BL: -6.786
Regeneration-depleted TP: -4.939

 0.987 - - - 0.987 - -

Mlig455_002138 {REF} {Length: 4372} {Pfam: Innexin [PF00876.20, score=62.4]} {Smed: dd_Smed_v6_9861_0_1, dd_Smed_v6_9861_0_1, [Score=60.1, Expect=9e-10]} {RNA1509_36214} {RNA1310_17023} {RNA815_33132}

Mlig455_002284 {REF} {Length: 2783} {Pfam: Innexin [PF00876.20, score=63.0]} {Smed: dd_Smed_v6_9861_0_1, dd_Smed_v6_9861_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_36214} {RNA1310_17023} {RNA815_33132}
8. MligTC455_35560 12 0.26 Mlig455_018545

Neo: -

Age: -

 0.979 - - - 0.979 - - Mlig455_018545 {REF} {Length: 1249} {NoTransDecoderORF} {RNA1509_11593} {RNA1310_56432} {RNA815_29988}
9. MligTC455_15003 144 3.01 Mlig455_007447

Neo: -

Age: -

 HSPA5 0.972 - - - - 0.972 - Mlig455_007447 {REF} {Length: 2902} {Pfam: Hsp70 protein [PF00012.22, score=871.1]; MreB/Mbl protein [PF06723.15, score=62.8]} {Human: ENSG00000044574, HSPA5, heat shock protein family A (Hsp70) member 5, [RH, Score=1022, Expect=0.0]} {Mouse: ENSMUSG00000026864, Hspa5, heat shock protein 5, [RH, Score=1023, Expect=0.0]} {Dmel: FBgn0001218, Hsc70-3, Heat shock 70-kDa protein cognate 3, [RH, Score=972, Expect=0.0]} {Celegans: WBGene00002007, hsp-3, Heat shock 70 kDa protein C, [RH, Score=991, Expect=0.0]} {Smed: dd_Smed_v6_2648_0_1, dd_Smed_v6_2648_0_1, [Score=877, Expect=0.0]} {RNA1509_45546} {RNA1310_10095} {RNA815_1200.1}
10. MligTC455_36416 57 1.19 Mlig455_064826

Neo: -

Age: -

 0.972 - - - 0.972 - - Mlig455_064826 {REF} {Length: 1774} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1310_14662} {RNA815_33830}
11. MligTC455_43506 73 1.53 Mlig455_006107

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.595

 0.966 - - - 0.966 - - Mlig455_006107 {REF} {Length: 703} {RNA1509_17222} {RNA1310_44913.1} {RNA815_37256}
12. MligTC455_43507 1112 23.16 Mlig455_055318

Neo: -

Age: logFC(26M/2M)=0.860

Region-enriched R3: 2.019/0.02166

 0.965 - - - 0.965 - - Mlig455_055318 {REF} {Length: 948} {RNA1509_17222} {RNA1310_44913.2} {RNA815_37256}
13. MligTC455_49251 62 1.29 Mlig455_049389

Neo: -

Age: -

 FOLR2 0.964 - - - - 0.964 - Mlig455_049389 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.4]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=123, Expect=2e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=121, Expect=9e-33]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=158, Expect=2e-47]} {RNA1509_23353} {RNA1310_17821, RNA1509_23353} {RNA1509_23353, RNA815_16281}
14. MligTC455_29474 48 1 Mlig455_037282

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_037282 {REF} {Length: 586} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_26620} {RNA815_37878}
15. MligTC455_30826 98 2.04 Mlig455_047664

Neo: -

Age: -

 0.963 - - - 0.963 - - Mlig455_047664 {REF} {Length: 879} {NoTransDecoderORF} {RNA1310_39208} {RNA815_16462}
16. MligTC455_46684 156 3.24 Mlig455_022903

Neo: -

Age: -

 FEM1B 0.962 - - - - 0.962 - Mlig455_022903 {REF} {Length: 4345} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.6]; Ankyrin repeat [PF13606.8, score=85.1]; Ankyrin repeats (many copies) [PF13637.8, score=83.6]; Ankyrin repeat [PF00023.32, score=73.0]; Ankyrin repeats (many copies) [PF13857.8, score=58.0]} {Human: ENSG00000169018, FEM1B, fem-1 homolog B, [RH, Score=459, Expect=2e-152]} {Mouse: ENSMUSG00000032244, Fem1b, feminization 1 homolog b (C. elegans), [RH, Score=458, Expect=2e-152]} {Dmel: FBgn0034542, Fem-1, [RH, Score=316, Expect=6e-97]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=218, Expect=2e-61]} {Smed: dd_Smed_v6_4909_0_1, dd_Smed_v6_4909_0_1, [Score=179, Expect=2e-47]} {RNA1509_12339} {RNA1310_9722.2} {RNA815_2857}
17. MligTC455_19014 49 1.02 Mlig455_049428

Neo: -

Age: -

Region-enriched R2: 5.618/0.02988

 0.961 - - - - 0.961 - Mlig455_049428 {REF} {Length: 2110} {RNA1310_86761} {RNA815_50337}
18. MligTC455_21361 11 0.22 Mlig455_055171

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_055171 {REF} {Length: 2189} {RNA1509_24654} {RNA1310_37556} {RNA815_23057}
19. MligTC455_43504 2388 49.76 Mlig455_055223

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_055223 {REF} {Length: 911} {RNA1509_17222} {RNA1310_44913.1} {RNA815_37256}
20. MligTC455_11410 24 0.5 Mlig455_070874

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_070874 {REF} {Length: 2487} {RNA1310_71185}
21. MligTC455_22920 196 4.08 Mlig455_039387

Neo: -

Age: -

 TRPC4 0.96 - - - 0.960 - - Mlig455_039387 {REF} {Length: 2289} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=63.5, Expect=6e-11]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=98.6, Expect=6e-23]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [Score=155, Expect=1e-42]} {RNA1509_26602} {RNA1310_3579} {RNA815_924}
22. MligTC455_01696 27 0.56 Mlig455_015093

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_015093 {REF} {Length: 629} {RNA1509_45595} {RNA1310_13430.1} {RNA815_343.1}
23. MligTC455_09372 2 0.05 Mlig455_036007

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_036007 {REF} {Length: 1412} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28683} {RNA1310_86428} {RNA815_3064.1}
24. MligTC455_39751 106 2.22 Mlig455_068358

Neo: -

Age: -

Region-enriched R5: 2.881/0.02724

 0.957 - - - - 0.957 - Mlig455_068358 {REF} {Length: 3597} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
25. MligTC455_33198 253 5.26 Mlig455_062515

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.392

 CAMKK2 0.956 - - - 0.956 - - Mlig455_062515 {REF} {Length: 3912} {Pfam: Protein kinase domain [PF00069.27, score=207.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.0]; Kinase-like [PF14531.8, score=29.6]} {Human: ENSG00000110931, CAMKK2, calcium/calmodulin dependent protein kinase kinase 2, [RH, Score=418, Expect=3e-134]; ENSG00000004660, CAMKK1, calcium/calmodulin dependent protein kinase kinase 1, [RH, Score=399, Expect=3e-127]} {Mouse: ENSMUSG00000029471, Camkk2, calcium/calmodulin-dependent protein kinase kinase 2, beta, [RH, Score=409, Expect=9e-131]; ENSMUSG00000020785, Camkk1, calcium/calmodulin-dependent protein kinase kinase 1, alpha, [RH, Score=395, Expect=5e-126]} {Dmel: FBgn0040056, CG17698, [RH, Score=404, Expect=1e-127]} {Celegans: WBGene00000518, ckk-1, Calcium/calmodulin-dependent protein kinase kinase, [RH, Score=415, Expect=1e-133]} {Smed: dd_Smed_v6_18437_0_1, dd_Smed_v6_18437_0_1, [RH, Score=367, Expect=1e-114]} {RNA1509_51718} {RNA1310_7593.1} {RNA815_7566}
26. MligTC455_47848 147 3.06 Mlig455_003585, Mlig455_015411, Mlig455_015464

Neo: -

Age: Down-Down-Up

 PRR9 0.956 - - - 0.956 - -

Mlig455_003585 {REF} {Length: 2572} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=6e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=84.0, Expect=1e-16]} {RNA1509_53616} {RNA1310_45929} {RNA815_26684}

Mlig455_015411 {REF} {Length: 955} {RNA1509_53616} {RNA1310_45929, RNA1509_53616} {RNA1509_53616, RNA815_26684}

Mlig455_015464 {REF} {Length: 890} {RNA1509_53616} {RNA1310_45929} {RNA815_26684}
27. MligTC455_27304 420 8.75 Mlig455_027275

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.861/0.02823

 0.955 - - - 0.955 - - Mlig455_027275 {REF} {Length: 2821} {Pfam: Cupin-like domain [PF13621.8, score=94.1]; Cupin superfamily protein [PF08007.14, score=22.4]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=59.7, Expect=3e-09]} {Dmel: FBgn0035166, CG13902, [Score=59.7, Expect=2e-09]} {Celegans: WBGene00007387, jmjd-5, JuMonJi (Transcription factor) Domain protein, [Score=55.5, Expect=5e-08]} {Smed: dd_Smed_v6_14490_0_1, dd_Smed_v6_14490_0_1, [RH, Score=349, Expect=5e-117]} {RNA1509_20375} {RNA1310_22474} {RNA815_8659}
28. MligTC455_48929 136 2.84 Mlig455_020273

Neo: -

Age: -

Region-enriched R2: 2.882/0.03873

 KCNA1 0.955 - - - 0.955 - - Mlig455_020273 {REF} {Length: 2395} {Pfam: Ion transport protein [PF00520.33, score=139.5]; BTB/POZ domain [PF02214.24, score=85.4]; Ion channel [PF07885.18, score=50.0]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=405, Expect=1e-136]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=399, Expect=2e-134]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [Score=385, Expect=6e-127]} {Mouse: ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=403, Expect=4e-136]; ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=399, Expect=1e-134]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [Score=385, Expect=4e-127]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=385, Expect=8e-129]} {Dmel: FBgn0003380, Sh, Shaker, [Score=403, Expect=3e-134]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=295, Expect=7e-95]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_46497} {RNA1310_11183, RNA1509_46497} {RNA1509_46497, RNA815_34861}
29. MligTC455_00462 37 0.77 Mlig455_000458

Neo: -

Age: -

Regeneration-enriched TP: 8.699
Regeneration-enriched BL: 7.460
Regeneration-enriched R3: 7.157
Regeneration-enriched R4: 6.829
Regeneration-enriched R6: 6.381
Regeneration-enriched R5: 6.068

 0.954 - - - - 0.954 - Mlig455_000458 {REF} {Length: 572} {NoTransDecoderORF}
30. MligTC455_06458 109 2.27 Mlig455_058915

Neo: -

Age: -

 TMEM184B 0.954 - - - 0.954 - - Mlig455_058915 {REF} {Length: 2946} {Pfam: Organic solute transporter Ostalpha [PF03619.18, score=289.5]} {Human: ENSG00000198792, TMEM184B, transmembrane protein 184B, [RH, Score=437, Expect=5e-152]} {Mouse: ENSMUSG00000009035, Tmem184b, transmembrane protein 184b, [RH, Score=432, Expect=5e-150]} {Dmel: FBgn0035236, CG12004, [RH, Score=446, Expect=2e-154]} {Celegans: WBGene00009574, F40E10.6, [RH, Score=473, Expect=2e-166]} {Smed: dd_Smed_v6_3881_1_1, dd_Smed_v6_3881_1_1, [RH, Score=461, Expect=2e-162]} {RNA1310_13503.1} {RNA815_394.1}
31. MligTC455_19425 48 1 Mlig455_036286

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_036286 {REF} {Length: 2321} {NoTransDecoderORF} {RNA1509_60145} {RNA1310_87383} {RNA815_53511}
32. MligTC455_15714 3080 64.18 Mlig455_048537, Mlig455_053319

Neo: -

Age: logFC(26M/2M)=-0.309

 0.951 - - - 0.951 - -

Mlig455_048537 {REF} {Length: 1066} {RNA1509_11930, RNA1509_23713} {RNA1310_39241, RNA1509_11930, RNA1509_23713} {RNA1509_11930, RNA1509_23713, RNA815_17853}

Mlig455_053319 {REF} {Length: 1056} {RNA1509_11930} {RNA1310_39241} {RNA815_17853}
33. MligTC455_22389 83 1.72 Mlig455_026979

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_026979 {REF} {Length: 1624} {Pfam: PT repeat [PF04886.14, score=28.2]}
34. MligTC455_25135 288 6 Mlig455_001749, Mlig455_001771

Neo: -

Age: -

Region-enriched R2: 2.329/0.04280

 P2RX4 0.951 - - - 0.951 - -

Mlig455_001749 {REF} {Length: 2951} {Pfam: ATP P2X receptor [PF00864.21, score=341.3]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=247, Expect=3e-75]; ENSG00000187848, P2RX2, purinergic receptor P2X 2, [Score=235, Expect=5e-70]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=248, Expect=1e-75]; ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=236, Expect=3e-70]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=316, Expect=7e-101]} {RNA1509_56054} {RNA1310_19416, RNA1509_56054} {RNA1509_56054, RNA815_42167}

Mlig455_001771 {REF} {Length: 2484} {Pfam: ATP P2X receptor [PF00864.21, score=341.3]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=247, Expect=3e-75]; ENSG00000187848, P2RX2, purinergic receptor P2X 2, [Score=235, Expect=5e-70]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=248, Expect=1e-75]; ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=236, Expect=3e-70]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=316, Expect=7e-101]} {RNA1509_56054} {RNA1310_19416} {RNA815_42167}
35. MligTC455_57011 12 0.25 Mlig455_027347

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_027347 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_20376} {RNA1310_41666} {RNA815_41194.1}
36. MligTC455_36826 28 0.58 Mlig455_013198

Neo: -

Age: -

Region-enriched R2: 5.359/0.01396

 HSPB6 0.95 - - - 0.950 - - Mlig455_013198 {REF} {Length: 2372} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=56.3]} {Human: ENSG00000004776, HSPB6, heat shock protein family B (small) member 6, [RH, Score=55.5, Expect=8e-09]} {Mouse: ENSMUSG00000036854, Hspb6, heat shock protein, alpha-crystallin-related, B6, [RH, Score=58.5, Expect=7e-10]} {Dmel: FBgn0011296, l(2)efl, lethal (2) essential for life, [Score=57.8, Expect=1e-09]} {Smed: dd_Smed_v6_15128_0_1, dd_Smed_v6_15128_0_1, [RH, Score=81.3, Expect=3e-17]} {RNA1310_41920} {RNA815_42079}
37. MligTC455_40104 165 3.45 Mlig455_008744, Mlig455_008758, Mlig455_035898

Neo: -

Age: -

 KCNMA1 0.95 - - - 0.950 - -

Mlig455_008744 {REF} {Length: 4230} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.0]; Ion transport protein [PF00520.33, score=57.1]; Ion channel [PF07885.18, score=55.9]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205, RNA1509_45041} {RNA1509_45041, RNA815_19099}

Mlig455_008758 {REF} {Length: 4229} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=103.9]; Ion transport protein [PF00520.33, score=56.3]; Ion channel [PF07885.18, score=55.6]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}

Mlig455_035898 {REF} {Length: 4325} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=574, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=595, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=583, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=621, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}
38. MligTC455_40308 21 0.44 Mlig455_047748

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_047748 {REF} {Length: 474} {NoTransDecoderORF}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA