Data search
Results for MligTC455_27190
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27190 | 686 | 14.30 | Mlig455_069689 | Neo: - Age: - Region-enriched R5: 2.147/0.01781 Regeneration-upregulated BL: 2.726 Regeneration-enriched BL: 2.726 |
RIOX1 | Mlig455_069689 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: Cupin superfamily protein [PF08007.14, score=211.7]; Cupin-like domain [PF13621.8, score=27.0]} {Human: ENSG00000170468, RIOX1, ribosomal oxygenase 1, [RH, Score=397, Expect=2e-130]} {Mouse: ENSMUSG00000046791, Riox1, ribosomal oxygenase 1, [RH, Score=395, Expect=6e-130]} {Dmel: FBgn0266570, CG2982, [RH, Score=329, Expect=3e-104]} {Celegans: WBGene00020902, jmjc-1, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, [RH, Score=273, Expect=4e-82]} {RNA1509_19703} {RNA1310_13539, RNA1509_19703} {RNA1509_19703, RNA815_7796} |
Cumulative graph for MligTC455_27190
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.716 | 4.194 | 0.02743 | 0.43338 | |
| RegionR2 | 2.294 | 4.194 | 0.01411 | 0.12464 | |
| RegionR3 | 1.251 | 4.194 | 0.16056 | 0.67830 | |
| RegionR4 | 0.582 | 4.194 | 0.55670 | 0.87656 | |
| RegionR5 | 2.147 | 4.194 | 0.00205 | 0.01781 | |
| RegionR6 | 1.8 | 4.194 | 0.02376 | 0.28032 | |
| RegionR7 | 0.81 | 4.194 | 0.45466 | 1.00000 | |
| RegionR8 | -1.168 | 4.194 | 0.99172 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.743 | 4.194 | 0.08244 | 0.78111 | |
| RegenerationR2 | 1.02 | 4.194 | 0.10859 | 0.51611 | |
| RegenerationR3 | 2.257 | 4.194 | 0.00140 | 0.06135 | |
| RegenerationR4 | 2.241 | 4.194 | 0.00183 | 0.05321 | |
| RegenerationR5 | 0.748 | 4.194 | 0.22391 | 0.65823 | |
| RegenerationR6 | 1.544 | 4.194 | 0.02003 | 0.17485 | |
| RegenerationBL | 2.726 | 4.194 | 0.00014 | 0.00566 | Specific for BL: 2.726 |
| RegenerationTP | 2.035 | 4.194 | 0.03261 | 0.30235 |
Genes with expression patterns similar to MligTC455_27190
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27190 | 686 | 14.3 | Mlig455_069689 | Neo: - Age: - Region-enriched R5: 2.147/0.01781 Regeneration-upregulated BL: 2.726 Regeneration-enriched BL: 2.726 |
RIOX1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069689 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: Cupin superfamily protein [PF08007.14, score=211.7]; Cupin-like domain [PF13621.8, score=27.0]} {Human: ENSG00000170468, RIOX1, ribosomal oxygenase 1, [RH, Score=397, Expect=2e-130]} {Mouse: ENSMUSG00000046791, Riox1, ribosomal oxygenase 1, [RH, Score=395, Expect=6e-130]} {Dmel: FBgn0266570, CG2982, [RH, Score=329, Expect=3e-104]} {Celegans: WBGene00020902, jmjc-1, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, [RH, Score=273, Expect=4e-82]} {RNA1509_19703} {RNA1310_13539, RNA1509_19703} {RNA1509_19703, RNA815_7796} |
| 2. | MligTC455_42795 | 694 | 14.47 | Mlig455_007126 | Neo: Irradiation Age: - Region-enriched R5: 1.805/0.00044 |
POLR3C | 3.226 | 0.731 | 0.732 | - | 0.957 | 0.806 | - | Mlig455_007126 {REF} {Length: 2156} {Pfam: RNA polymerase III subunit RPC82 [PF05645.15, score=24.7]; TFIIE alpha subunit [PF02002.19, score=19.0]} {Human: ENSG00000186141, POLR3C, RNA polymerase III subunit C, [RH, Score=180, Expect=8e-49]} {Mouse: ENSMUSG00000028099, Polr3c, polymerase (RNA) III (DNA directed) polypeptide C, [RH, Score=183, Expect=4e-50]} {Dmel: FBgn0038057, CG12267, [RH, Score=105, Expect=9e-24]} {RNA1509_8125} {RNA1310_9635.1, RNA1509_8125} {RNA1509_8125, RNA815_3590.1} |
| 3. | MligTC455_08466 | 882 | 18.38 | Mlig455_050890 | Neo: - Age: - |
XYLB | 2.656 | - | - | - | 0.872 | 0.951 | 0.833 | Mlig455_050890 {REF} {Length: 843} {Pfam: FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=59.4]} {Human: ENSG00000093217, XYLB, xylulokinase, [Score=105, Expect=6e-26]} {Mouse: ENSMUSG00000035769, Xylb, xylulokinase homolog (H. influenzae), [Score=106, Expect=3e-26]} {Dmel: FBgn0038463, CG3534, [Score=100, Expect=3e-24]} {Celegans: WBGene00011147, R08D7.7, Uncharacterized sugar kinase R08D7.7, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_11103_1_8, dd_Smed_v6_11103_1_8, [Score=89.0, Expect=5e-21]} {RNA1509_27855} {RNA1310_8740} {RNA815_3649.1} |
| 4. | MligTC455_44916 | 688 | 14.33 | Mlig455_025259 | Neo: - |
GMPPA | 2.584 | - | 0.750 | 0.873 | - | 0.961 | - | Mlig455_025259 {REF} {Length: 1859} {TRANSSPLICED} {Pfam: Nucleotidyl transferase [PF00483.25, score=97.0]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=29.6]; MobA-like NTP transferase domain [PF12804.9, score=21.3]} {Human: ENSG00000144591, GMPPA, GDP-mannose pyrophosphorylase A, [RH, Score=458, Expect=1e-159]} {Mouse: ENSMUSG00000033021, Gmppa, GDP-mannose pyrophosphorylase A, [RH, Score=461, Expect=4e-161]} {Dmel: FBgn0034035, CG8207, [RH, Score=450, Expect=1e-156]} {Celegans: WBGene00021628, Y47D9A.1, [RH, Score=398, Expect=9e-137]} {Smed: dd_Smed_v6_4150_0_1, dd_Smed_v6_4150_0_1, [RH, Score=496, Expect=6e-175]} {RNA1509_37379} {RNA1310_15544, RNA1509_37379} {RNA1509_37379, RNA815_10312.2} |
| 5. | MligTC455_47207 | 1909 | 39.76 | Mlig455_066877 | Neo: - Age: - Region-enriched R5: 1.278/0.00010 |
2.458 | 0.781 | - | 0.715 | 0.962 | - | - | Mlig455_066877 {REF} {Length: 1225} {TRANSSPLICED} {RNA1509_24249, RNA1509_38093, RNA1509_56750} {RNA1310_21666.1, RNA1509_24249, RNA1509_38093} {RNA1509_24249, RNA1509_38093, RNA815_9948.1} | |
| 6. | MligTC455_47206 | 3906 | 81.38 | Mlig455_019459, Mlig455_060520 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.266 Region-enriched R5: 1.184/0.00021 |
UTP3 | 2.438 | 0.768 | - | 0.705 | 0.965 | - | - | Mlig455_019459 {REF} {Length: 1414} {TRANSSPLICED} {Pfam: Sas10 C-terminal domain [PF09368.12, score=62.7]} {Human: ENSG00000132467, UTP3, UTP3, small subunit processome component, [RH, Score=69.7, Expect=3e-12]} {Mouse: ENSMUSG00000070697, Utp3, UTP3 small subunit processome component, [RH, Score=68.9, Expect=3e-12]} {Dmel: FBgn0029755, Sas10, Something about silencing 10, [RH, Score=64.7, Expect=4e-11]} {Smed: dd_Smed_v6_9806_0_1, dd_Smed_v6_9806_0_1, [RH, Score=66.2, Expect=7e-12]} {RNA1509_43452, RNA1509_5115, RNA1509_56750} {RNA1310_21666.1, RNA1509_43452, RNA1509_5115, RNA1509_56750} {RNA1509_43452, RNA1509_5115, RNA1509_56750, RNA815_9948.1} Mlig455_060520 {REF} {Length: 1428} {TRANSSPLICED} {Pfam: Sas10 C-terminal domain [PF09368.12, score=61.7]} {Human: ENSG00000132467, UTP3, UTP3, small subunit processome component, [RH, Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000070697, Utp3, UTP3 small subunit processome component, [RH, Score=70.9, Expect=5e-13]} {Dmel: FBgn0029755, Sas10, Something about silencing 10, [RH, Score=63.9, Expect=6e-11]} {Smed: dd_Smed_v6_9806_0_1, dd_Smed_v6_9806_0_1, [RH, Score=66.2, Expect=6e-12]} {RNA1509_42522, RNA1509_56750} {RNA1310_21666.1, RNA1509_42522} {RNA1509_42522, RNA815_9948.1} |
| 7. | MligTC455_35845 | 530 | 11.05 | Mlig455_063785 | Neo: - Age: - Region-enriched R5: 1.375/0.00006 |
2.427 | - | - | 0.702 | 0.769 | 0.956 | - | Mlig455_063785 {REF} {Length: 4759} {TRANSSPLICED} {RNA1509_4401, RNA1509_46808, RNA1509_51880} {RNA1310_6922, RNA1509_46808, RNA1509_51880} {RNA1509_46808, RNA1509_51880, RNA815_12752} | |
| 8. | MligTC455_51506 | 1346 | 28.05 | Mlig455_020731, Mlig455_020802 | Neo: Int S/G2/M Age: - |
1.816 | - | - | - | 0.859 | 0.957 | - | Mlig455_020731 {REF} {Length: 2629} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.3]; WD domain, G-beta repeat [PF00400.34, score=23.5]} {Smed: dd_Smed_v6_12553_0_1, dd_Smed_v6_12553_0_1, [RH, Score=127, Expect=1e-32]} {RNA1509_15677, RNA1509_53184} {RNA1310_14716, RNA1509_15677, RNA1509_53184} {RNA1509_15677, RNA1509_53184, RNA815_16160} Mlig455_020802 {REF} {Length: 1759} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.6]; WD domain, G-beta repeat [PF00400.34, score=23.4]} {Smed: dd_Smed_v6_12553_0_1, dd_Smed_v6_12553_0_1, [RH, Score=129, Expect=1e-33]} {RNA1509_15677} {RNA1310_14716} {RNA815_16160} |
|
| 9. | MligTC455_42859 | 2083 | 43.39 | Mlig455_008722 | Neo: Int S/G2/M Age: Down-Up-Up |
MRPL4 | 1.762 | - | - | - | 0.950 | 0.812 | - | Mlig455_008722 {REF} {Length: 1235} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=113.5]} {Human: ENSG00000105364, MRPL4, mitochondrial ribosomal protein L4, [RH, Score=176, Expect=2e-52]} {Mouse: ENSMUSG00000003299, Mrpl4, mitochondrial ribosomal protein L4, [RH, Score=178, Expect=2e-53]} {Dmel: FBgn0001995, mRpL4, mitochondrial ribosomal protein L4, [RH, Score=207, Expect=7e-65]} {Celegans: WBGene00020717, mrpl-4, Mitochondrial Ribosomal Protein, Large, [RH, Score=177, Expect=4e-53]} {Smed: dd_Smed_v6_4353_0_1, dd_Smed_v6_4353_0_1, [RH, Score=243, Expect=9e-79]} {RNA1509_15601} {RNA1310_28032, RNA1509_15601} {RNA1509_15601, RNA815_15145} |
| 10. | MligTC455_21851 | 665 | 13.85 | Mlig455_031575 | Neo: - Age: Down-Down-Up |
ALAD | 1.691 | - | - | - | 0.960 | 0.731 | - | Mlig455_031575 {REF} {Length: 1226} {TRANSSPLICED} {Pfam: Delta-aminolevulinic acid dehydratase [PF00490.23, score=389.9]} {Human: ENSG00000148218, ALAD, aminolevulinate dehydratase, [RH, Score=377, Expect=7e-131]} {Mouse: ENSMUSG00000028393, Alad, aminolevulinate, delta-, dehydratase, [RH, Score=369, Expect=7e-128]} {Dmel: FBgn0036271, Pbgs, Porphobilinogen synthase, [RH, Score=330, Expect=1e-112]} {Smed: dd_Smed_v6_6364_0_1, dd_Smed_v6_6364_0_1, [RH, Score=365, Expect=1e-126]} {RNA1509_20362} {RNA1310_26908} {RNA815_12467} |
| 11. | MligTC455_04366 | 654 | 13.63 | Mlig455_052829 | Neo: - Age: - |
UPF2 | 1.677 | - | - | - | 0.727 | 0.950 | - | Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1} |
| 12. | MligTC455_44121 | 492 | 10.25 | Mlig455_070864 | Neo: - Age: - |
RSF1 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_070864 {REF} {Length: 6357} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=9e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=7e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=179, Expect=2e-45]} {RNA1509_8090} {RNA1310_1065.1} {RNA815_778.1} |
| 13. | MligTC455_24458 | 2287 | 47.64 | Mlig455_013839, Mlig455_059935 | Neo: - Age: logFC(26M/2M)=0.235 |
BUD13 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_013839 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor of RES complex [PF09736.11, score=103.4]} {Human: ENSG00000137656, BUD13, BUD13 homolog, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000032077, Bud13, BUD13 homolog, [RH, Score=114, Expect=4e-26]} {Dmel: FBgn0039210, CG13625, [RH, Score=182, Expect=3e-49]} {Celegans: WBGene00011142, R08D7.1, BUD13 homolog, [Score=134, Expect=1e-33]} {Smed: dd_Smed_v6_9510_0_1, dd_Smed_v6_9510_0_1, [RH, Score=98.6, Expect=3e-23]} {RNA1509_15472} {RNA1310_12442, RNA1509_15472} {RNA1509_15472, RNA815_8851.2} Mlig455_059935 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor of RES complex [PF09736.11, score=103.4]} {Human: ENSG00000137656, BUD13, BUD13 homolog, [RH, Score=121, Expect=1e-28]} {Mouse: ENSMUSG00000032077, Bud13, BUD13 homolog, [RH, Score=114, Expect=3e-26]} {Dmel: FBgn0039210, CG13625, [RH, Score=181, Expect=6e-49]} {Celegans: WBGene00011142, R08D7.1, BUD13 homolog, [RH, Score=132, Expect=4e-33]} {Smed: dd_Smed_v6_9510_0_1, dd_Smed_v6_9510_0_1, [RH, Score=98.2, Expect=3e-23]} {RNA1509_15472} {RNA1310_12442} {RNA815_8851.2} |
| 14. | MligTC455_42122 | 1719 | 35.81 | Mlig455_055741 | Neo: Irradiation Age: - |
PSME4 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_055741 {REF} {Length: 6602} {TRANSSPLICED} {Pfam: Proteasome-substrate-size regulator, mid region [PF16507.7, score=219.2]; Domain of unknown function (DUF3437) [PF11919.10, score=112.1]; HEAT repeat [PF02985.24, score=21.0]} {Human: ENSG00000068878, PSME4, proteasome activator subunit 4, [RH, Score=467, Expect=2e-134]} {Mouse: ENSMUSG00000040850, Psme4, proteasome (prosome, macropain) activator subunit 4, [RH, Score=451, Expect=2e-129]} {Celegans: WBGene00007588, C14C10.5, [RH, Score=321, Expect=3e-88]} {Smed: dd_Smed_v6_4721_0_1, dd_Smed_v6_4721_0_1, [RH, Score=247, Expect=2e-65]} {RNA1509_1964, RNA1509_44855} {RNA1310_316.1, RNA1509_1964, RNA1509_44855} {RNA1509_1964, RNA1509_44855, RNA815_167} |
| 15. | MligTC455_54190 | 623 | 12.97 | Mlig455_052767 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.540/0.00327 |
KMT5A | 0.957 | - | - | - | - | - | 0.957 | Mlig455_052767 {REF} {Length: 2990} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=60.5]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [RH, Score=165, Expect=7e-48]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [RH, Score=165, Expect=2e-48]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [RH, Score=167, Expect=2e-46]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [RH, Score=149, Expect=4e-43]} {Smed: dd_Smed_v6_5677_0_2, dd_Smed_v6_5677_0_2, [RH, Score=183, Expect=4e-56]} {RNA1509_38432} {RNA1310_27674.1, RNA1509_38432} {RNA1509_38432, RNA815_13723} |
| 16. | MligTC455_42549 | 825 | 17.18 | Mlig455_057020 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.473 Region-specific R5: 2.261 Region-enriched R5: 1.949/0.00000 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_057020 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Urb2/Npa2 family [PF10441.11, score=24.2]} {RNA1509_13931} {RNA1310_18688.1, RNA1509_13931} {RNA1509_13931, RNA815_25561} |
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