Data search
Results for MligTC455_09750
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_09750 | 514 | 10.71 | Mlig455_031136 | Neo: - Age: Up-Down-Down |
HUWE1 | Mlig455_031136 {REF} {Length: 9814} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=303.1]; Ubiquitin binding region [PF14377.8, score=50.5]; UBA/TS-N domain [PF00627.33, score=29.5]} {Human: ENSG00000086758, HUWE1, HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000025261, Huwe1, HECT, UBA and WWE domain containing 1, [RH, Score=680, Expect=0.0]} {Dmel: FBgn0030674, CG8184, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00022069, eel-1, Enhancer of EfL-1 mutant phenotype, [RH, Score=598, Expect=5e-172]} {Smed: dd_Smed_v6_3378_0_1, dd_Smed_v6_3378_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_5302} {RNA1310_235.1} {RNA815_1135} |
Cumulative graph for MligTC455_09750
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.677 | 3.713 | 0.51844 | 1.00000 | |
| RegionR2 | 1.02 | 3.713 | 0.07594 | 0.33703 | |
| RegionR3 | 0.1 | 3.713 | 0.82752 | 1.00000 | |
| RegionR4 | -0.04 | 3.713 | 0.93108 | 1.00000 | |
| RegionR5 | -0.171 | 3.713 | 0.67770 | 1.00000 | |
| RegionR6 | -0.217 | 3.713 | 0.65209 | 1.00000 | |
| RegionR7 | -0.393 | 3.713 | 0.53344 | 1.00000 | |
| RegionR8 | 0.378 | 3.713 | 0.58182 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.356 | 3.713 | 0.31677 | 1.00000 | |
| RegenerationR2 | 0.381 | 3.713 | 0.42687 | 0.83205 | |
| RegenerationR3 | 0.525 | 3.713 | 0.34277 | 0.76688 | |
| RegenerationR4 | -0.204 | 3.713 | 0.72142 | 0.96211 | |
| RegenerationR5 | 0.342 | 3.713 | 0.49612 | 0.85656 | |
| RegenerationR6 | 1.215 | 3.713 | 0.02810 | 0.20934 | |
| RegenerationBL | -1.398 | 3.713 | 0.11005 | 0.39155 | |
| RegenerationTP | -0.925 | 3.713 | 0.25596 | 0.70305 |
Genes with expression patterns similar to MligTC455_09750
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_09750 | 514 | 10.71 | Mlig455_031136 | Neo: - Age: Up-Down-Down |
HUWE1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031136 {REF} {Length: 9814} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=303.1]; Ubiquitin binding region [PF14377.8, score=50.5]; UBA/TS-N domain [PF00627.33, score=29.5]} {Human: ENSG00000086758, HUWE1, HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000025261, Huwe1, HECT, UBA and WWE domain containing 1, [RH, Score=680, Expect=0.0]} {Dmel: FBgn0030674, CG8184, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00022069, eel-1, Enhancer of EfL-1 mutant phenotype, [RH, Score=598, Expect=5e-172]} {Smed: dd_Smed_v6_3378_0_1, dd_Smed_v6_3378_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_5302} {RNA1310_235.1} {RNA815_1135} |
| 2. | MligTC455_23720 | 791 | 16.48 | Mlig455_003566, Mlig455_015492 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.199 |
SF3A1 | 2.472 | - | - | - | 0.770 | 0.751 | 0.951 | Mlig455_003566 {REF} {Length: 4010} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=146.7]; Pre-mRNA splicing factor PRP21 like protein [PF12230.10, score=112.6]; Ubiquitin family [PF00240.25, score=35.3]} {Human: ENSG00000099995, SF3A1, splicing factor 3a subunit 1, [RH, Score=460, Expect=5e-150]} {Mouse: ENSMUSG00000002129, Sf3a1, splicing factor 3a, subunit 1, [RH, Score=461, Expect=1e-150]} {Dmel: FBgn0266917, Sf3a1, Splicing factor 3a subunit 1, [RH, Score=457, Expect=3e-149]} {Celegans: WBGene00004188, prp-21, Pre-RNA processing 21; Yeast PRP (Splicing factor) related, [RH, Score=381, Expect=1e-121]} {Smed: dd_Smed_v6_1001_0_1, dd_Smed_v6_1001_0_1, [RH, Score=426, Expect=9e-140]} {RNA1509_22180} {RNA1310_7991} {RNA815_785} Mlig455_015492 {REF} {Length: 3386} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=146.7]; Pre-mRNA splicing factor PRP21 like protein [PF12230.10, score=111.7]; Ubiquitin family [PF00240.25, score=35.3]} {Human: ENSG00000099995, SF3A1, splicing factor 3a subunit 1, [RH, Score=459, Expect=1e-149]} {Mouse: ENSMUSG00000002129, Sf3a1, splicing factor 3a, subunit 1, [RH, Score=461, Expect=3e-150]} {Dmel: FBgn0266917, Sf3a1, Splicing factor 3a subunit 1, [RH, Score=455, Expect=3e-148]} {Celegans: WBGene00004188, prp-21, Pre-RNA processing 21; Yeast PRP (Splicing factor) related, [RH, Score=380, Expect=4e-121]} {Smed: dd_Smed_v6_1001_0_1, dd_Smed_v6_1001_0_1, [RH, Score=422, Expect=1e-138]} {RNA1509_16361, RNA1509_22180} {RNA1310_7991, RNA1509_16361, RNA1509_22180} {RNA1509_16361, RNA1509_22180, RNA815_785} |
| 3. | MligTC455_22889 | 401 | 8.35 | Mlig455_049943 | Neo: - Age: - Region-enriched R8: 2.350/0.00423 |
0.965 | - | - | 0.965 | - | - | - | Mlig455_049943 {REF} {Length: 4673} {RNA1509_32044} {RNA1310_13599.2, RNA1509_32044} {RNA1509_32044, RNA815_5368.1} | |
| 4. | MligTC455_33041 | 415 | 8.65 | Mlig455_032967 | Neo: - Age: Up-Up-Down |
RAB3C | 0.965 | - | - | - | - | - | 0.965 | Mlig455_032967 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=8e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=3e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=333, Expect=2e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=326, Expect=1e-114]} {Dmel: FBgn0005586, Rab3, [RH, Score=345, Expect=2e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=343, Expect=7e-122]} {RNA1509_20846, RNA1509_33673} {RNA1310_14402, RNA1509_20846, RNA1509_33673} {RNA1509_20846, RNA1509_33673, RNA815_5665.1} |
| 5. | MligTC455_47794 | 767 | 15.99 | Mlig455_061481 | Neo: - Age: - |
COPS8 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_061481 {REF} {Length: 1276} {TRANSSPLICED} {Pfam: CSN8/PSMD8/EIF3K family [PF10075.11, score=46.0]} {Human: ENSG00000198612, COPS8, COP9 signalosome subunit 8, [Score=67.4, Expect=2e-13]} {Mouse: ENSMUSG00000034432, Cops8, COP9 signalosome subunit 8, [Score=65.9, Expect=4e-13]} {RNA1509_27754, RNA1509_54334} {RNA1310_39752, RNA1509_27754} {RNA1509_27754, RNA815_30337} |
| 6. | MligTC455_51800 | 518 | 10.79 | Mlig455_041708 | Neo: - Age: Up-Down-Down |
YME1L1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_041708 {REF} {Length: 5534} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=176.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=143.1]; AAA+ lid domain [PF17862.3, score=25.9]; AAA ATPase domain [PF13191.8, score=24.7]; AAA domain [PF13401.8, score=22.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=21.7]; TIP49 P-loop domain [PF06068.15, score=17.9]} {Human: ENSG00000136758, YME1L1, YME1 like 1 ATPase, [RH, Score=462, Expect=2e-152]} {Mouse: ENSMUSG00000026775, Yme1l1, YME1-like 1 (S. cerevisiae), [RH, Score=460, Expect=2e-151]} {Dmel: FBgn0034792, YME1L, YME1 like ATPase, [RH, Score=484, Expect=2e-160]} {Celegans: WBGene00010842, ymel-1, ATP-dependent zinc metalloprotease YME1 homolog, [RH, Score=471, Expect=9e-156]} {Smed: dd_Smed_v6_962_0_1, dd_Smed_v6_962_0_1, [RH, Score=446, Expect=9e-147]} {RNA1509_45054, RNA1509_7847} {RNA1310_2453.1, RNA1509_45054, RNA1509_7847} {RNA1509_45054, RNA1509_7847, RNA815_3285} |
| 7. | MligTC455_43348 | 323 | 6.73 | Mlig455_017642, Mlig455_037289, Mlig455_037326 | Neo: Int S/G2/M Age: Down-Up-Down |
0.962 | - | - | 0.962 | - | - | - | Mlig455_017642 {REF} {Length: 688} {RNA1509_36083, RNA1509_47371} {RNA1310_70069.2, RNA1509_36083, RNA1509_47371} {RNA1509_36083, RNA1509_47371, RNA815_50181} Mlig455_037289 {REF} {Length: 1590} {RNA1509_47371} {RNA1310_70069.2} {RNA815_39015} Mlig455_037326 {REF} {Length: 1097} {RNA1509_47371} {RNA1310_70069.2} {RNA815_50181} |
|
| 8. | MligTC455_30671 | 1425 | 29.69 | Mlig455_039597 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_039597 {REF} {Length: 689} {NoTransDecoderORF} {RNA1509_15005} {RNA1310_6745.1} {RNA815_19937.1} |
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