TomoSeq data search

Data search

Results for MligTC455_47794

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47794

767

15.99

Mlig455_061481

Neo: -

Age: -

COPS8

Mlig455_061481 {REF} {Length: 1276} {TRANSSPLICED} {Pfam: CSN8/PSMD8/EIF3K family [PF10075.11, score=46.0]} {Human: ENSG00000198612, COPS8, COP9 signalosome subunit 8, [Score=67.4, Expect=2e-13]} {Mouse: ENSMUSG00000034432, Cops8, COP9 signalosome subunit 8, [Score=65.9, Expect=4e-13]} {RNA1509_27754, RNA1509_54334} {RNA1310_39752, RNA1509_27754} {RNA1509_27754, RNA815_30337}

Cumulative graph for MligTC455_47794

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.469	4.343	0.56197	1.00000
RegionR2	0.192	4.343	0.64474	0.98168
RegionR3	-0.307	4.343	0.36226	0.89789
RegionR4	-0.18	4.343	0.63217	0.94048
RegionR5	0.614	4.343	0.02460	0.11243
RegionR6	-0.034	4.343	0.91948	1.00000
RegionR7	-0.462	4.343	0.34025	0.97662
RegionR8	-0.293	4.343	0.62022	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.77	4.343	0.53722	1.00000
RegenerationR2	-0.104	4.343	0.77019	0.98049
RegenerationR3	0.241	4.343	0.53991	0.87750
RegenerationR4	0.279	4.343	0.46104	0.84791
RegenerationR5	-0.25	4.343	0.45560	0.83361
RegenerationR6	0.591	4.343	0.11610	0.41941
RegenerationBL	0.187	4.343	0.71599	1.00000
RegenerationTP	-0.24	4.343	0.68413	1.00000

Genes with expression patterns similar to MligTC455_47794

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47794	767	15.99	Mlig455_061481	Neo: - Age: -	COPS8	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061481 {REF} {Length: 1276} {TRANSSPLICED} {Pfam: CSN8/PSMD8/EIF3K family [PF10075.11, score=46.0]} {Human: ENSG00000198612, COPS8, COP9 signalosome subunit 8, [Score=67.4, Expect=2e-13]} {Mouse: ENSMUSG00000034432, Cops8, COP9 signalosome subunit 8, [Score=65.9, Expect=4e-13]} {RNA1509_27754, RNA1509_54334} {RNA1310_39752, RNA1509_27754} {RNA1509_27754, RNA815_30337}
2.	MligTC455_42380	920	19.17	Mlig455_003776	Neo: Irradiation Age: -		2.587	-	-	-	0.751	0.879	0.957	Mlig455_003776 {REF} {Length: 1193} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4743) [PF15916.7, score=74.0]; NUDIX domain [PF00293.30, score=43.7]} {Dmel: FBgn0039958, CG12567, [RH, Score=177, Expect=8e-53]} {Smed: dd_Smed_v6_11761_0_1, dd_Smed_v6_11761_0_1, [RH, Score=233, Expect=2e-75]} {RNA1509_22954} {RNA1310_24085} {RNA815_9482}
3.	MligTC455_11085	273	5.68	Mlig455_020464	Neo: - Age: -	SUPT3H	1.752	0.789	-	-	0.963	-	-	Mlig455_020464 {REF} {Length: 3547} {Pfam: Transcription initiation factor IID, 18kD subunit [PF02269.18, score=25.0]; NHR1 homology to TAF [PF07531.16, score=20.5]} {Human: ENSG00000196284, SUPT3H, SPT3 homolog, SAGA and STAGA complex component, [Score=55.5, Expect=2e-07]} {Mouse: ENSMUSG00000038954, Supt3, suppressor of Ty 3, [RH, Score=68.2, Expect=2e-11]} {RNA1509_32661} {RNA1310_23242.2} {RNA815_37972}
4.	MligTC455_13200	367	7.65	Mlig455_010092	Neo: - Age: Up-Down-Up		1.722	-	0.770	-	-	-	0.952	Mlig455_010092 {REF} {Length: 2206} {TRANSSPLICED} {Dmel: FBgn0032170, CG4658, [RH, Score=60.5, Expect=2e-09]} {Celegans: WBGene00021442, Y39A3CL.4, [RH, Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_7080_0_1, dd_Smed_v6_7080_0_1, [RH, Score=102, Expect=2e-23]} {RNA1509_32591, RNA1509_39521, RNA1509_59196} {RNA1310_19032, RNA1509_32591, RNA1509_39521, RNA1509_59196} {RNA1509_32591, RNA1509_39521, RNA1509_59196, RNA815_22127}
5.	MligTC455_43951	218	4.55	Mlig455_007315	Neo: - Age: -	NEMP2	0.979	-	-	-	-	-	0.979	Mlig455_007315 {REF} {Length: 2661} {TRANSSPLICED} {Pfam: NEMP family [PF10225.11, score=163.5]} {Human: ENSG00000189362, NEMP2, nuclear envelope integral membrane protein 2, [RH, Score=103, Expect=2e-23]; ENSG00000166881, NEMP1, nuclear envelope integral membrane protein 1, [RH, Score=102, Expect=9e-23]} {Mouse: ENSMUSG00000043015, Nemp2, nuclear envelope integral membrane protein 2, [RH, Score=77.0, Expect=1e-14]} {RNA1509_26871, RNA1509_42654} {RNA1310_10680, RNA1509_26871, RNA1509_42654} {RNA1509_26871, RNA1509_42654, RNA815_39512}
6.	MligTC455_09750	514	10.71	Mlig455_031136	Neo: - Age: Up-Down-Down	HUWE1	0.965	-	-	-	-	-	0.965	Mlig455_031136 {REF} {Length: 9814} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=303.1]; Ubiquitin binding region [PF14377.8, score=50.5]; UBA/TS-N domain [PF00627.33, score=29.5]} {Human: ENSG00000086758, HUWE1, HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000025261, Huwe1, HECT, UBA and WWE domain containing 1, [RH, Score=680, Expect=0.0]} {Dmel: FBgn0030674, CG8184, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00022069, eel-1, Enhancer of EfL-1 mutant phenotype, [RH, Score=598, Expect=5e-172]} {Smed: dd_Smed_v6_3378_0_1, dd_Smed_v6_3378_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_5302} {RNA1310_235.1} {RNA815_1135}
7.	MligTC455_33041	415	8.65	Mlig455_032967	Neo: - Age: Up-Up-Down	RAB3C	0.959	-	-	-	-	-	0.959	Mlig455_032967 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=8e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=3e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=333, Expect=2e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=326, Expect=1e-114]} {Dmel: FBgn0005586, Rab3, [RH, Score=345, Expect=2e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=343, Expect=7e-122]} {RNA1509_20846, RNA1509_33673} {RNA1310_14402, RNA1509_20846, RNA1509_33673} {RNA1509_20846, RNA1509_33673, RNA815_5665.1}
8.	MligTC455_17059	675	14.05	Mlig455_024231	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.444 Region-enriched R5: 2.503/0.00000		0.958	-	-	-	-	-	0.958	Mlig455_024231 {REF} {Length: 934} {TRANSSPLICED} {Smed: dd_Smed_v6_5763_0_1, dd_Smed_v6_5763_0_1, [RH, Score=47.4, Expect=2e-08]} {RNA1509_37376, RNA1509_58298} {RNA1310_38000, RNA1509_37376, RNA1509_58298} {RNA1509_37376, RNA1509_58298, RNA815_17733}
9.	MligTC455_44791	570	11.87	Mlig455_040025	Neo: - Age: - Region-enriched R5: 2.098/0.00188		0.956	-	-	-	-	-	0.956	Mlig455_040025 {REF} {Length: 1132} {TRANSSPLICED} {RNA1509_59812} {RNA1310_53092.2, RNA1509_59812} {RNA1509_59812, RNA815_55470}
10.	MligTC455_15257	414	8.62	Mlig455_029934	Neo: - Age: - Region-enriched R5: 1.807/0.01619	HSCB	0.955	-	-	-	-	-	0.955	Mlig455_029934 {REF} {Length: 1897} {TRANSSPLICED} {Pfam: HSCB C-terminal oligomerisation domain [PF07743.15, score=59.0]; DnaJ domain [PF00226.33, score=21.0]} {Human: ENSG00000100209, HSCB, HscB mitochondrial iron-sulfur cluster cochaperone, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000043510, Hscb, HscB iron-sulfur cluster co-chaperone, [RH, Score=120, Expect=2e-32]} {Dmel: FBgn0263606, Hsc20, Heat shock protein cognate 20, [RH, Score=97.4, Expect=5e-24]} {Celegans: WBGene00001033, dnj-15, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=95.1, Expect=2e-23]} {Smed: dd_Smed_v6_10268_0_1, dd_Smed_v6_10268_0_1, [RH, Score=100, Expect=2e-25]} {RNA1509_26929, RNA1509_28969} {RNA1310_15086, RNA1509_26929, RNA1509_28969} {RNA1509_26929, RNA1509_28969, RNA815_5984.1}
11.	MligTC455_54284	664	13.83	Mlig455_066973	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.273	HIKESHI	0.953	-	-	-	-	-	0.953	Mlig455_066973 {REF} {Length: 1266} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF775) [PF05603.14, score=175.7]} {Human: ENSG00000149196, HIKESHI, Hikeshi, heat shock protein nuclear import factor, [RH, Score=150, Expect=9e-46]} {Mouse: ENSMUSG00000062797, Hikeshi, heat shock protein nuclear import factor, [RH, Score=150, Expect=8e-46]} {Dmel: FBgn0035243, CG13926, [RH, Score=164, Expect=3e-51]} {Celegans: WBGene00018328, F42A6.6, [RH, Score=134, Expect=9e-40]} {Smed: dd_Smed_v6_5997_0_1, dd_Smed_v6_5997_0_1, [RH, Score=142, Expect=7e-43]} {RNA1509_22230, RNA1509_33605} {RNA1310_45824, RNA1509_22230, RNA1509_33605} {RNA1509_22230, RNA1509_33605, RNA815_12184}
12.	MligTC455_52741	574	11.96	Mlig455_018861	Neo: - Age: Down-Up-Up Region-enriched R5: 1.470/0.00013	SLC25A32	0.95	-	-	-	-	-	0.950	Mlig455_018861 {REF} {Length: 1784} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=208.0]} {Human: ENSG00000164933, SLC25A32, solute carrier family 25 member 32, [RH, Score=319, Expect=3e-108]} {Mouse: ENSMUSG00000022299, Slc25a32, solute carrier family 25, member 32, [RH, Score=309, Expect=1e-104]; ENSMUSG00000107007, Slc25a32, solute carrier family 25, member 32, [RH, Score=309, Expect=1e-104]} {Dmel: FBgn0033391, CG8026, [RH, Score=321, Expect=2e-109]} {Celegans: WBGene00010459, slc-25A32, SLC (SoLute Carrier) homolog, [RH, Score=200, Expect=3e-62]} {Smed: dd_Smed_v6_4728_0_1, dd_Smed_v6_4728_0_1, [RH, Score=308, Expect=2e-104]} {RNA1509_17302, RNA1509_25677} {RNA1310_32072, RNA1509_17302} {RNA1509_17302, RNA815_17036}

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