Data search
Results for MligTC455_09966
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_09966 | 13 | 0.27 | Mlig455_037956 | Neo: - Age: - |
COL4A1 | Mlig455_037956 {REF} {Length: 1183} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=52.1]} {Human: ENSG00000187498, COL4A1, collagen type IV alpha 1 chain, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=62.4, Expect=5e-11]; ENSMUSG00000026390, Marco, macrophage receptor with collagenous structure, [Score=61.6, Expect=8e-11]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=61.2, Expect=1e-10]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=67.0, Expect=8e-13]} {Smed: dd_Smed_v6_2197_0_1, dd_Smed_v6_2197_0_1, [Score=67.0, Expect=6e-13]} {RNA1310_35905} {RNA815_18113} |
Cumulative graph for MligTC455_09966
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_09966
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_09966 | 13 | 0.27 | Mlig455_037956 | Neo: - Age: - |
COL4A1 | 1 | - | - | - | - | 1.000 | - | Mlig455_037956 {REF} {Length: 1183} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=52.1]} {Human: ENSG00000187498, COL4A1, collagen type IV alpha 1 chain, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=62.4, Expect=5e-11]; ENSMUSG00000026390, Marco, macrophage receptor with collagenous structure, [Score=61.6, Expect=8e-11]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=61.2, Expect=1e-10]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=67.0, Expect=8e-13]} {Smed: dd_Smed_v6_2197_0_1, dd_Smed_v6_2197_0_1, [Score=67.0, Expect=6e-13]} {RNA1310_35905} {RNA815_18113} |
| 2. | MligTC455_13041 | 15 | 0.3 | Mlig455_041814 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_041814 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_42220} {RNA815_52710} | |
| 3. | MligTC455_14625 | 12 | 0.24 | Mlig455_045049 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_045049 {REF} {Length: 1923} | |
| 4. | MligTC455_22923 | 53 | 1.1 | Mlig455_068434 | Neo: - Age: Down-Up-Down |
MYLK3 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_068434 {REF} {Length: 2249} {Pfam: Protein kinase domain [PF00069.27, score=28.7]} {Human: ENSG00000140795, MYLK3, myosin light chain kinase 3, [Score=49.7, Expect=1e-07]} {Mouse: ENSMUSG00000031698, Mylk3, myosin light chain kinase 3, [Score=49.7, Expect=9e-08]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [Score=48.5, Expect=1e-07]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=49.3, Expect=4e-08]} {RNA1509_36787} {RNA1310_62109} {RNA815_9443} |
| 5. | MligTC455_25052 | 180 | 3.74 | Mlig455_029793 | Neo: - Age: Up-Down-Down |
HERC2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_029793 {REF} {Length: 16855} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=518.2]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=184.0]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=180.6]; Mib_herc2 [PF06701.15, score=64.9]; Mouse development and cellular proliferation protein Cullin-7 [PF11515.10, score=63.4]; Zinc finger, ZZ type [PF00569.19, score=26.4]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=23.5]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2195, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2200, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1271, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=3e-26]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1098, Expect=0.0]} {RNA1509_2217, RNA1509_26920} {RNA1310_95.1, RNA1509_2217, RNA1509_26920} {RNA1509_2217, RNA1509_26920, RNA815_620} |
| 6. | MligTC455_12759 | 19 | 0.39 | Mlig455_029819 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_029819 {REF} {Length: 285} {NoTransDecoderORF} |
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