TomoSeq data search

Data search

Results for MligTC455_12759

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12759

19

0.39

Mlig455_029819

Neo: -

Age: -

Mlig455_029819 {REF} {Length: 285} {NoTransDecoderORF}

Cumulative graph for MligTC455_12759

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.689	0.729	0.99990	1.00000
RegionR2	-0.141	0.729	0.99990	1.00000
RegionR3	-0.241	0.729	0.99985	1.00000
RegionR4	-0.216	0.729	0.99992	1.00000
RegionR5	-0.376	0.729	0.99990	1.00000
RegionR6	-0.386	0.729	0.99989	1.00000
RegionR7	0.134	0.729	0.99989	1.00000
RegionR8	0.537	0.729	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.83	0.729	0.99991	1.00000
RegenerationR2	3.449	0.729	0.31230	0.75207
RegenerationR3	1.907	0.729	0.71403	0.95305
RegenerationR4	0.785	0.729	0.75752	0.97201
RegenerationR5	2.584	0.729	0.46697	0.84054
RegenerationR6	2.689	0.729	0.53762	0.83159
RegenerationBL	-0.464	0.729	0.99993	1.00000
RegenerationTP	4.018	0.729	0.49169	0.89638

Genes with expression patterns similar to MligTC455_12759

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12759	19	0.39	Mlig455_029819	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_029819 {REF} {Length: 285} {NoTransDecoderORF}
2.	MligTC455_09752	15	0.3	Mlig455_006516	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_006516 {REF} {Length: 635} {NoTransDecoderORF}
3.	MligTC455_22923	53	1.1	Mlig455_068434	Neo: - Age: Down-Up-Down	MYLK3	0.977	-	-	-	-	0.977	-	Mlig455_068434 {REF} {Length: 2249} {Pfam: Protein kinase domain [PF00069.27, score=28.7]} {Human: ENSG00000140795, MYLK3, myosin light chain kinase 3, [Score=49.7, Expect=1e-07]} {Mouse: ENSMUSG00000031698, Mylk3, myosin light chain kinase 3, [Score=49.7, Expect=9e-08]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [Score=48.5, Expect=1e-07]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=49.3, Expect=4e-08]} {RNA1509_36787} {RNA1310_62109} {RNA815_9443}
4.	MligTC455_49338	92	1.92	Mlig455_019714	Neo: - Age: - Region-enriched R2: 3.827/0.02214 Region-enriched R7: 3.806/0.00162 Region-enriched R6: 3.186/0.02925	CA7	0.968	-	-	-	-	0.968	-	Mlig455_019714 {REF} {Length: 2496} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=207.6]} {Human: ENSG00000168748, CA7, carbonic anhydrase 7, [Score=157, Expect=2e-45]} {Mouse: ENSMUSG00000031883, Car7, carbonic anhydrase 7, [Score=156, Expect=3e-45]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=129, Expect=8e-35]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=89.0, Expect=6e-20]} {Smed: dd_Smed_v6_11683_0_1, dd_Smed_v6_11683_0_1, [Score=159, Expect=4e-46]} {RNA1509_43765} {RNA1310_22186, RNA1509_43765} {RNA1509_43765, RNA815_18428}
5.	MligTC455_14625	12	0.24	Mlig455_045049	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_045049 {REF} {Length: 1923}
6.	MligTC455_09966	13	0.27	Mlig455_037956	Neo: - Age: -	COL4A1	0.954	-	-	-	-	0.954	-	Mlig455_037956 {REF} {Length: 1183} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=52.1]} {Human: ENSG00000187498, COL4A1, collagen type IV alpha 1 chain, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=62.4, Expect=5e-11]; ENSMUSG00000026390, Marco, macrophage receptor with collagenous structure, [Score=61.6, Expect=8e-11]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=61.2, Expect=1e-10]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=67.0, Expect=8e-13]} {Smed: dd_Smed_v6_2197_0_1, dd_Smed_v6_2197_0_1, [Score=67.0, Expect=6e-13]} {RNA1310_35905} {RNA815_18113}
7.	MligTC455_20717	964	20.08	Mlig455_010303, Mlig455_010334	Neo: - Age: - Region-enriched R6: 8.114/0.00000 Regeneration-upregulated TP: 8.019 Regeneration-enriched TP: 8.019		0.954	-	-	-	-	0.954	-	Mlig455_010303 {REF} {Length: 1139} {TRANSSPLICED} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_30258} {RNA1310_41086.1} {RNA815_30011} Mlig455_010334 {REF} {Length: 2409} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_54865} {RNA1310_41086.1} {RNA815_30011}
8.	MligTC455_25728	126	2.62	Mlig455_033609, Mlig455_050117	Neo: - Age: logFC(26M/2M)=1.218		0.954	-	-	-	-	0.954	-	Mlig455_033609 {REF} {Length: 1672} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=84.6]; HSP20-like domain found in ArsA [PF17886.3, score=27.8]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=110, Expect=9e-29]} {RNA1509_26837} {RNA1310_32639} {RNA815_36629} Mlig455_050117 {REF} {Length: 1185} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=84.6]; HSP20-like domain found in ArsA [PF17886.3, score=27.8]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=110, Expect=9e-29]} {RNA1509_26837} {RNA1310_32639, RNA1509_26837} {RNA1509_26837, RNA815_36629}
9.	MligTC455_35552	32	0.67	Mlig455_035296	Neo: - Age: -	SCNN1B	0.951	-	-	-	-	0.951	-	Mlig455_035296 {REF} {Length: 3475} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=357, Expect=9e-114]} {RNA1509_53211} {RNA1310_6642.3, RNA1509_53211} {RNA1509_53211, RNA815_12322}

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