Data search
Results for MligTC455_10372
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10372 | 4993 | 104.02 | Mlig455_028602 | Neo: Int S/G2/M |
COPE | Mlig455_028602 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Coatomer epsilon subunit [PF04733.16, score=347.5]; Tetratricopeptide repeat [PF14559.8, score=26.0]; Tetratricopeptide repeat [PF13428.8, score=25.1]; Tetratricopeptide repeat [PF13424.8, score=24.5]; Tetratricopeptide repeat [PF07719.19, score=23.8]; Tetratricopeptide repeat [PF13432.8, score=22.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=20.3]; Tetratricopeptide repeat [PF13176.8, score=19.2]; Tetratricopeptide repeat [PF00515.30, score=18.3]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [RH, Score=335, Expect=6e-115]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [RH, Score=332, Expect=7e-114]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [RH, Score=168, Expect=4e-50]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [RH, Score=178, Expect=4e-54]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [RH, Score=269, Expect=1e-89]} {RNA1509_3221} {RNA1310_24235.1} {RNA815_10191.1} |
Cumulative graph for MligTC455_10372
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.904 | 6.791 | 0.08332 | 0.62966 | |
| RegionR2 | -0.576 | 6.791 | 0.06255 | 0.30176 | |
| RegionR3 | -0.314 | 6.791 | 0.23431 | 0.77601 | |
| RegionR4 | 0.717 | 6.791 | 0.01885 | 0.09773 | |
| RegionR5 | 0.825 | 6.791 | 0.00063 | 0.00704 | |
| RegionR6 | 0.221 | 6.791 | 0.39069 | 0.96486 | |
| RegionR7 | 0.365 | 6.791 | 0.18167 | 0.78017 | |
| RegionR8 | -0.335 | 6.791 | 0.33162 | 0.96547 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.244 | 6.791 | 0.72560 | 1.00000 | |
| RegenerationR2 | -0.208 | 6.791 | 0.51587 | 0.87821 | |
| RegenerationR3 | -0.157 | 6.791 | 0.63655 | 0.92351 | |
| RegenerationR4 | -0.4 | 6.791 | 0.23194 | 0.68040 | |
| RegenerationR5 | -0.628 | 6.791 | 0.04585 | 0.34933 | |
| RegenerationR6 | -0.472 | 6.791 | 0.14714 | 0.46989 | |
| RegenerationBL | 0.035 | 6.791 | 0.90678 | 1.00000 | |
| RegenerationTP | -0.407 | 6.791 | 0.22503 | 0.66963 |
Genes with expression patterns similar to MligTC455_10372
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10372 | 4993 | 104.02 | Mlig455_028602 | Neo: Int S/G2/M |
COPE | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028602 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Coatomer epsilon subunit [PF04733.16, score=347.5]; Tetratricopeptide repeat [PF14559.8, score=26.0]; Tetratricopeptide repeat [PF13428.8, score=25.1]; Tetratricopeptide repeat [PF13424.8, score=24.5]; Tetratricopeptide repeat [PF07719.19, score=23.8]; Tetratricopeptide repeat [PF13432.8, score=22.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=20.3]; Tetratricopeptide repeat [PF13176.8, score=19.2]; Tetratricopeptide repeat [PF00515.30, score=18.3]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [RH, Score=335, Expect=6e-115]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [RH, Score=332, Expect=7e-114]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [RH, Score=168, Expect=4e-50]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [RH, Score=178, Expect=4e-54]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [RH, Score=269, Expect=1e-89]} {RNA1509_3221} {RNA1310_24235.1} {RNA815_10191.1} |
| 2. | MligTC455_10373 | 10137 | 211.18 | Mlig455_028584, Mlig455_056914 | Neo: - |
COPE | 5.9 | 0.998 | 0.911 | 0.996 | 0.999 | 0.998 | 0.998 | Mlig455_028584 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Coatomer epsilon subunit [PF04733.16, score=356.1]; Tetratricopeptide repeat [PF14559.8, score=28.6]; Tetratricopeptide repeat [PF13428.8, score=26.6]; Tetratricopeptide repeat [PF13424.8, score=24.7]; Tetratricopeptide repeat [PF07719.19, score=23.8]; Tetratricopeptide repeat [PF13432.8, score=21.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=20.6]; Tetratricopeptide repeat [PF13176.8, score=19.2]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [RH, Score=340, Expect=4e-117]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [RH, Score=337, Expect=5e-116]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [RH, Score=173, Expect=5e-52]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [RH, Score=184, Expect=2e-56]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [RH, Score=275, Expect=6e-92]} {RNA1509_3221} {RNA1310_24235.1} {RNA815_10191.1} Mlig455_056914 {REF} {Length: 6395} {Pfam: Coatomer epsilon subunit [PF04733.16, score=232.6]; Tetratricopeptide repeat [PF13424.8, score=26.5]; Tetratricopeptide repeat [PF13432.8, score=21.5]; Tetratricopeptide repeat [PF14559.8, score=20.8]; Tetratricopeptide repeat [PF13428.8, score=20.7]; Tetratricopeptide repeat [PF07719.19, score=19.9]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [Score=225, Expect=6e-72]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [Score=215, Expect=1e-68]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [Score=111, Expect=1e-28]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [Score=100, Expect=9e-25]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [Score=180, Expect=2e-55]} {RNA1509_37310} {RNA1310_5066} {RNA815_10191.1} |
| 3. | MligTC455_24797 | 1059 | 22.07 | Mlig455_005846 | Neo: Neoblast, stringent Age: - |
NAA40 | 1.717 | - | - | 0.748 | - | - | 0.969 | Mlig455_005846 {REF} {Length: 2251} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=31.8]; Acetyltransferase (GNAT) domain [PF13673.9, score=25.7]; Acetyltransferase (GNAT) domain [PF13508.9, score=20.5]} {Human: ENSG00000110583, NAA40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [RH, Score=125, Expect=5e-35]} {Mouse: ENSMUSG00000024764, Naa40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0039687, Naa40, N(alpha)-acetyltransferase 40, [RH, Score=84.0, Expect=9e-20]} {Celegans: WBGene00021392, Y38A10A.7, [RH, Score=100, Expect=7e-26]} {Smed: dd_Smed_v6_5816_0_1, dd_Smed_v6_5816_0_1, [RH, Score=137, Expect=2e-40]} {RNA1509_10929, RNA1509_12392, RNA1509_16087, RNA1509_22613, RNA1509_41142, RNA1509_7467, RNA1509_9523} {RNA1310_32415.1, RNA1509_10929, RNA1509_12392, RNA1509_16087, RNA1509_22613, RNA1509_41142, RNA1509_7467, RNA1509_9523} {RNA1509_10929, RNA1509_12392, RNA1509_16087, RNA1509_22613, RNA1509_41142, RNA1509_7467, RNA1509_9523, RNA815_15758} |
| 4. | MligTC455_42697 | 1444 | 30.09 | Mlig455_005879, Mlig455_028659, Mlig455_028669 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.353/0.02300 |
UTP23 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_005879 {REF} {Length: 1005} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=43.4]} {Human: ENSG00000147679, UTP23, UTP23, small subunit processome component, [RH, Score=71.6, Expect=4e-14]} {Mouse: ENSMUSG00000022313, Utp23, UTP23 small subunit processome component, [RH, Score=65.5, Expect=4e-12]} {Smed: dd_Smed_v6_10604_0_1, dd_Smed_v6_10604_0_1, [RH, Score=55.8, Expect=6e-09]} {RNA1509_22060} {RNA1310_28697} {RNA815_16477} Mlig455_028659 {REF} {Length: 1009} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=42.1]} {Human: ENSG00000147679, UTP23, UTP23, small subunit processome component, [RH, Score=75.1, Expect=3e-15]} {Mouse: ENSMUSG00000022313, Utp23, UTP23 small subunit processome component, [RH, Score=62.4, Expect=5e-11]} {Smed: dd_Smed_v6_10604_0_1, dd_Smed_v6_10604_0_1, [RH, Score=57.4, Expect=2e-09]} {RNA1509_22060} {RNA1310_28697} {RNA815_16477} Mlig455_028669 {REF} {Length: 1009} {TRANSSPLICED} {Pfam: Fcf1 [PF04900.14, score=42.1]} {Human: ENSG00000147679, UTP23, UTP23, small subunit processome component, [RH, Score=75.1, Expect=3e-15]} {Mouse: ENSMUSG00000022313, Utp23, UTP23 small subunit processome component, [RH, Score=62.4, Expect=5e-11]} {Smed: dd_Smed_v6_10604_0_1, dd_Smed_v6_10604_0_1, [RH, Score=57.4, Expect=2e-09]} {RNA1509_22060, RNA1509_41424} {RNA1310_28697, RNA1509_22060, RNA1509_41424} {RNA1509_22060, RNA1509_41424, RNA815_16477} |
| 5. | MligTC455_52060 | 860 | 17.92 | Mlig455_020170 | Neo: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_020170 {REF} {Length: 1703} {TRANSSPLICED} {Pfam: Mid-1-related chloride channel (MCLC) [PF05934.13, score=24.2]} {RNA1509_45538} {RNA1310_18152, RNA1509_45538} {RNA1509_45538, RNA815_7271} | |
| 6. | MligTC455_16140 | 1639 | 34.14 | Mlig455_019088 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.807 Region-enriched R5: 1.616/0.00000 |
HPDL | 0.96 | - | - | - | - | - | 0.960 | Mlig455_019088 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=26.6]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=23.9]} {Human: ENSG00000186603, HPDL, 4-hydroxyphenylpyruvate dioxygenase like, [RH, Score=117, Expect=6e-29]} {Mouse: ENSMUSG00000043155, Hpdl, 4-hydroxyphenylpyruvate dioxygenase-like, [RH, Score=124, Expect=6e-32]} {Dmel: FBgn0036992, CG11796, [Score=102, Expect=2e-24]} {Celegans: WBGene00016294, C31H2.4, Putative protein C31H2.4, [Score=104, Expect=6e-25]} {Smed: dd_Smed_v6_13579_0_1, dd_Smed_v6_13579_0_1, [RH, Score=167, Expect=6e-48]} {RNA1509_3068} {RNA1310_18738, RNA1509_3068} {RNA1509_3068, RNA815_12614} |
| 7. | MligTC455_38924 | 425 | 8.86 | Mlig455_023099 | Neo: - Age: - Region-enriched R5: 1.465/0.01471 |
IPPK | 0.957 | - | - | - | - | - | 0.957 | Mlig455_023099 {REF} {Length: 3339} {TRANSSPLICED} {Pfam: Inositol-pentakisphosphate 2-kinase [PF06090.14, score=228.8]} {Human: ENSG00000127080, IPPK, inositol-pentakisphosphate 2-kinase, [RH, Score=145, Expect=6e-37]} {Mouse: ENSMUSG00000021385, Ippk, inositol 1,3,4,5,6-pentakisphosphate 2-kinase, [RH, Score=147, Expect=6e-38]} {Dmel: FBgn0050295, Ipk1, [RH, Score=70.1, Expect=3e-12]} {Celegans: WBGene00012466, ippk-1, Inositol 1,3,4,5,6-PentakisPhosphate 2-Kinase homolog, [RH, Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_7143_0_2, dd_Smed_v6_7143_0_2, [RH, Score=114, Expect=5e-27]} {RNA1509_11545} {RNA1310_13930, RNA1509_11545} {RNA1509_11545, RNA815_4764.1} |
| 8. | MligTC455_25981 | 970 | 20.21 | Mlig455_020309 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.666 Region-enriched R5: 2.043/0.00000 |
FIGNL1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_020309 {REF} {Length: 2500} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=125.9]; AAA+ lid domain [PF17862.3, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=24.7]; Vps4 C terminal oligomerisation domain [PF09336.12, score=21.0]} {Human: ENSG00000132436, FIGNL1, fidgetin like 1, [RH, Score=439, Expect=3e-146]} {Mouse: ENSMUSG00000035455, Fignl1, fidgetin-like 1, [RH, Score=436, Expect=4e-145]} {Dmel: FBgn0031519, Fign, Fidgetin, [RH, Score=320, Expect=4e-102]} {Celegans: WBGene00017981, figl-1, Fidgetin-like protein 1, [RH, Score=338, Expect=2e-108]} {Smed: dd_Smed_v6_14599_0_2, dd_Smed_v6_14599_0_2, [RH, Score=394, Expect=2e-130]} {RNA1509_15082, RNA1509_24009} {RNA1310_15510, RNA1509_15082, RNA1509_24009} {RNA1509_15082, RNA1509_24009, RNA815_18261} |
| 9. | MligTC455_16141 | 1644 | 34.25 | Mlig455_064276 | Neo: Irradiation Age: Down-Down-Up Region-enriched R5: 1.589/0.00000 |
HPDL | 0.954 | - | - | - | - | - | 0.954 | Mlig455_064276 {REF} {Length: 1629} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=26.5]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=23.0]} {Human: ENSG00000186603, HPDL, 4-hydroxyphenylpyruvate dioxygenase like, [RH, Score=120, Expect=5e-30]} {Mouse: ENSMUSG00000043155, Hpdl, 4-hydroxyphenylpyruvate dioxygenase-like, [RH, Score=127, Expect=1e-32]} {Dmel: FBgn0036992, CG11796, [Score=103, Expect=7e-25]} {Celegans: WBGene00016294, C31H2.4, Putative protein C31H2.4, [Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_13579_0_1, dd_Smed_v6_13579_0_1, [RH, Score=166, Expect=1e-47]} {RNA1509_3068} {RNA1310_18738} {RNA815_12614} |
| 10. | MligTC455_43563 | 1015 | 21.15 | Mlig455_009843 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.329 Region-specific R5: 2.152 Region-enriched R5: 2.058/0.00000 |
PLD6 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_009843 {REF} {Length: 936} {TRANSSPLICED} {Pfam: PLD-like domain [PF13091.8, score=97.1]} {Human: ENSG00000179598, PLD6, phospholipase D family member 6, [RH, Score=112, Expect=1e-29]} {Mouse: ENSMUSG00000043648, Pld6, phospholipase D family, member 6, [RH, Score=115, Expect=3e-31]} {Dmel: FBgn0261266, zuc, zucchini, [RH, Score=111, Expect=2e-29]} {Smed: dd_Smed_v6_11719_0_2, dd_Smed_v6_11719_0_2, [RH, Score=98.2, Expect=9e-25]} {RNA1509_19315, RNA1509_26144} {RNA1310_37212, RNA1509_19315, RNA1509_26144} {RNA1509_19315, RNA1509_26144, RNA815_17664} |
| 11. | MligTC455_43564 | 852 | 17.76 | Mlig455_010345 | Neo: - Age: logFC(26M/2M)=0.757 Region-specific R5: 2.049 Region-enriched R5: 1.969/0.00000 |
PLD6 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_010345 {REF} {Length: 936} {TRANSSPLICED} {Pfam: PLD-like domain [PF13091.8, score=97.6]} {Human: ENSG00000179598, PLD6, phospholipase D family member 6, [RH, Score=112, Expect=1e-29]} {Mouse: ENSMUSG00000043648, Pld6, phospholipase D family, member 6, [RH, Score=115, Expect=3e-31]} {Dmel: FBgn0261266, zuc, zucchini, [RH, Score=110, Expect=2e-29]} {Smed: dd_Smed_v6_11719_0_2, dd_Smed_v6_11719_0_2, [RH, Score=99.0, Expect=5e-25]} {RNA1509_26144} {RNA1310_37212} {RNA815_17664} |
| 12. | MligTC455_52576 | 9086 | 189.28 | Mlig455_033217 | Neo: - Age: Down-Down-Up |
RPL6 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_033217 {REF} {Length: 1506} {Pfam: Ribosomal protein L6e [PF01159.21, score=115.5]; EF hand [PF00036.34, score=44.6]; EF-hand domain pair [PF13499.8, score=43.7]; EF hand [PF13202.8, score=38.9]; EF-hand domain [PF13405.8, score=34.9]; EF-hand domain pair [PF13833.8, score=22.9]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=19.7]} {Human: ENSG00000089009, RPL6, ribosomal protein L6, [RH, Score=209, Expect=5e-65]} {Mouse: ENSMUSG00000029614, Rpl6, ribosomal protein L6, [RH, Score=207, Expect=2e-64]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=208, Expect=2e-65]} {Celegans: WBGene00004417, rpl-6, 60S ribosomal protein L6, [RH, Score=162, Expect=4e-48]} {Smed: dd_Smed_v6_205_0_1, dd_Smed_v6_205_0_1, [RH, Score=201, Expect=1e-63]} {RNA1509_16099, RNA1509_3130} {RNA1310_25136.1, RNA1509_16099, RNA1509_3130} {RNA1509_16099, RNA1509_3130, RNA815_9531} |
| 13. | MligTC455_47581 | 612 | 12.74 | Mlig455_050168 | Neo: - Age: - Region-specific R5: 3.044 Region-enriched R5: 2.304/0.00003 |
C19orf12 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_050168 {REF} {Length: 762} {TRANSSPLICED} {Human: ENSG00000131943, C19orf12, chromosome 19 open reading frame 12, [RH, Score=71.6, Expect=3e-16]} {Mouse: ENSMUSG00000054676, 1600014C10Rik, RIKEN cDNA 1600014C10 gene, [RH, Score=82.4, Expect=1e-20]} {Dmel: FBgn0023530, CG3740, [RH, Score=69.3, Expect=1e-15]} {RNA1509_14124, RNA1509_19078, RNA1509_40112, RNA1509_54973} {RNA1310_48313.1, RNA1509_14124, RNA1509_19078, RNA1509_40112, RNA1509_54973} {RNA1509_14124, RNA1509_19078, RNA1509_40112, RNA1509_54973, RNA815_24031} |
Berezikov Lab - 2020-2021 © ERIBA