Data search
Results for MligTC455_10541
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10541 | 568 | 11.84 | Mlig455_046053 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.521/0.00803 |
RFFL | Mlig455_046053 {REF} {Length: 3172} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=41.8]} {Human: ENSG00000092871, RFFL, ring finger and FYVE like domain containing E3 ubiquitin protein ligase, [RH, Score=122, Expect=2e-32]; ENSG00000267618, RAD51L3-RFFL, RAD51L3-RFFL readthrough, [RH, Score=120, Expect=4e-32]; ENSG00000170633, RNF34, ring finger protein 34, [RH, Score=120, Expect=6e-31]} {Mouse: ENSMUSG00000029474, Rnf34, ring finger protein 34, [RH, Score=126, Expect=1e-33]; ENSMUSG00000020696, Rffl, ring finger and FYVE like domain containing protein, [RH, Score=123, Expect=1e-32]} {Dmel: FBgn0033783, CG17019, [RH, Score=123, Expect=2e-31]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=62.0, Expect=9e-11]} {Smed: dd_Smed_v6_6206_0_1, dd_Smed_v6_6206_0_1, [RH, Score=144, Expect=1e-40]} {RNA1509_15310, RNA1509_54859} {RNA1310_32374, RNA1509_15310, RNA1509_54859} {RNA1509_15310, RNA1509_54859, RNA815_14804} |
Cumulative graph for MligTC455_10541
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.376 | 3.982 | 0.21556 | 0.85610 | |
| RegionR2 | -0.326 | 3.982 | 0.54604 | 0.91259 | |
| RegionR3 | -0.371 | 3.982 | 0.41808 | 0.94257 | |
| RegionR4 | 1.521 | 3.982 | 0.00072 | 0.00803 | |
| RegionR5 | 1.35 | 3.982 | 0.00019 | 0.00281 | |
| RegionR6 | 0.204 | 3.982 | 0.63572 | 1.00000 | |
| RegionR7 | -0.587 | 3.982 | 0.30180 | 0.93660 | |
| RegionR8 | -0.415 | 3.982 | 0.52200 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.487 | 3.982 | 0.14785 | 0.88929 | |
| RegenerationR2 | 0.254 | 3.982 | 0.58133 | 0.90781 | |
| RegenerationR3 | 0.079 | 3.982 | 0.87925 | 1.00000 | |
| RegenerationR4 | -1.096 | 3.982 | 0.02367 | 0.24678 | |
| RegenerationR5 | -0.192 | 3.982 | 0.64657 | 0.93070 | |
| RegenerationR6 | -0.292 | 3.982 | 0.56925 | 0.85099 | |
| RegenerationBL | -1.713 | 3.982 | 0.02773 | 0.18443 | |
| RegenerationTP | 0.759 | 3.982 | 0.20514 | 0.64711 |
Genes with expression patterns similar to MligTC455_10541
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10541 | 568 | 11.84 | Mlig455_046053 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.521/0.00803 |
RFFL | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046053 {REF} {Length: 3172} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=41.8]} {Human: ENSG00000092871, RFFL, ring finger and FYVE like domain containing E3 ubiquitin protein ligase, [RH, Score=122, Expect=2e-32]; ENSG00000267618, RAD51L3-RFFL, RAD51L3-RFFL readthrough, [RH, Score=120, Expect=4e-32]; ENSG00000170633, RNF34, ring finger protein 34, [RH, Score=120, Expect=6e-31]} {Mouse: ENSMUSG00000029474, Rnf34, ring finger protein 34, [RH, Score=126, Expect=1e-33]; ENSMUSG00000020696, Rffl, ring finger and FYVE like domain containing protein, [RH, Score=123, Expect=1e-32]} {Dmel: FBgn0033783, CG17019, [RH, Score=123, Expect=2e-31]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=62.0, Expect=9e-11]} {Smed: dd_Smed_v6_6206_0_1, dd_Smed_v6_6206_0_1, [RH, Score=144, Expect=1e-40]} {RNA1509_15310, RNA1509_54859} {RNA1310_32374, RNA1509_15310, RNA1509_54859} {RNA1509_15310, RNA1509_54859, RNA815_14804} |
| 2. | MligTC455_17325 | 946 | 19.7 | Mlig455_020480 | Neo: - Age: Down-Up-Up Region-enriched R5: 2.284/0.00000 |
2.408 | - | - | 0.747 | 0.708 | - | 0.953 | Mlig455_020480 {REF} {Length: 922} {TRANSSPLICED} {RNA1509_31242} {RNA1310_36884, RNA1509_31242} {RNA1509_31242, RNA815_22323} | |
| 3. | MligTC455_42197 | 327 | 6.8 | Mlig455_049872 | Neo: Irradiation Age: - Region-enriched R5: 2.917/0.00005 |
1.799 | - | - | - | - | 0.845 | 0.954 | Mlig455_049872 {REF} {Length: 3454} {RNA1509_33212} {RNA1310_9077.1} {RNA815_11156} | |
| 4. | MligTC455_46280 | 4615 | 96.14 | Mlig455_070151 | Neo: - |
CDIP1 | 1.707 | - | - | - | - | 0.755 | 0.952 | Mlig455_070151 {REF} {Length: 1177} {TRANSSPLICED} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=78.1]} {Human: ENSG00000274336, CDIP1, cell death inducing p53 target 1, [RH, Score=85.5, Expect=6e-21]; ENSG00000089486, CDIP1, cell death inducing p53 target 1, [RH, Score=85.5, Expect=6e-21]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=85.1, Expect=5e-21]} {Dmel: FBgn0052280, CG32280, [RH, Score=73.9, Expect=3e-17]} {Celegans: WBGene00009484, F36G3.3, [Score=67.8, Expect=8e-15]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [RH, Score=92.4, Expect=1e-24]} {RNA1509_2186} {RNA1310_32688, RNA1509_2186} {RNA1509_2186, RNA815_14393.2} |
| 5. | MligTC455_40244 | 175 | 3.65 | Mlig455_038594 | Neo: - Age: Down-Up-Up |
UBLCP1 | 1.67 | - | - | - | - | 0.711 | 0.959 | Mlig455_038594 {REF} {Length: 2444} {TRANSSPLICED} {Pfam: Sir2 family [PF02146.19, score=82.3]; NLI interacting factor-like phosphatase [PF03031.20, score=74.1]; Ubiquitin family [PF00240.25, score=25.6]} {Human: ENSG00000164332, UBLCP1, ubiquitin like domain containing CTD phosphatase 1, [RH, Score=248, Expect=4e-76]} {Mouse: ENSMUSG00000041231, Ublcp1, ubiquitin-like domain containing CTD phosphatase 1, [RH, Score=254, Expect=1e-78]} {Dmel: FBgn0027526, Ublcp1, Ubiquitin-like domain-containing C-terminal domain phosphatase 1, [RH, Score=267, Expect=2e-83]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=112, Expect=2e-27]} {Smed: dd_Smed_v6_4904_0_1, dd_Smed_v6_4904_0_1, [RH, Score=266, Expect=8e-83]} {RNA1509_41577} {RNA1310_21793.1} {RNA815_10040} |
| 6. | MligTC455_51120 | 460 | 9.57 | Mlig455_039194 | Neo: - Age: - Region-enriched R5: 1.820/0.02997 |
COG4 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_039194 {REF} {Length: 2849} {TRANSSPLICED} {Pfam: COG4 transport protein [PF08318.14, score=245.0]} {Human: ENSG00000103051, COG4, component of oligomeric golgi complex 4, [RH, Score=505, Expect=5e-168]} {Mouse: ENSMUSG00000031753, Cog4, component of oligomeric golgi complex 4, [RH, Score=509, Expect=1e-169]} {Dmel: FBgn0032258, CG7456, [RH, Score=394, Expect=1e-125]} {Celegans: WBGene00021784, cogc-4, Conserved oligomeric Golgi complex subunit 4, [RH, Score=310, Expect=8e-94]} {Smed: dd_Smed_v6_4093_0_1, dd_Smed_v6_4093_0_1, [RH, Score=414, Expect=8e-134]} {RNA1509_12364} {RNA1310_5961.1, RNA1509_12364} {RNA1509_12364, RNA815_9869} |
| 7. | MligTC455_40243 | 220 | 4.59 | Mlig455_038452 | Neo: - Age: - |
UBLCP1 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_038452 {REF} {Length: 2439} {TRANSSPLICED} {Pfam: Sir2 family [PF02146.19, score=83.1]; NLI interacting factor-like phosphatase [PF03031.20, score=74.8]; Ubiquitin family [PF00240.25, score=25.4]} {Human: ENSG00000164332, UBLCP1, ubiquitin like domain containing CTD phosphatase 1, [RH, Score=250, Expect=1e-76]} {Mouse: ENSMUSG00000041231, Ublcp1, ubiquitin-like domain containing CTD phosphatase 1, [RH, Score=257, Expect=2e-79]} {Dmel: FBgn0027526, Ublcp1, Ubiquitin-like domain-containing C-terminal domain phosphatase 1, [RH, Score=269, Expect=3e-84]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=111, Expect=8e-27]} {Smed: dd_Smed_v6_4904_0_1, dd_Smed_v6_4904_0_1, [RH, Score=268, Expect=1e-83]} {RNA1509_12265} {RNA1310_21793.1} {RNA815_10040} |
| 8. | MligTC455_33078 | 532 | 11.07 | Mlig455_034086 | Neo: Int S/G2/M Age: - |
UBE2K | 0.963 | - | - | - | - | - | 0.963 | Mlig455_034086 {REF} {Length: 1152} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=134.8]; UBA/TS-N domain [PF00627.33, score=28.3]; RWD domain [PF05773.24, score=19.7]} {Human: ENSG00000078140, UBE2K, ubiquitin conjugating enzyme E2 K, [RH, Score=248, Expect=5e-84]} {Mouse: ENSMUSG00000029203, Ube2k, ubiquitin-conjugating enzyme E2K, [RH, Score=248, Expect=4e-84]} {Dmel: FBgn0015321, Ubc4, Ubiquitin conjugating enzyme 4, [RH, Score=248, Expect=3e-84]} {Celegans: WBGene00006715, ubc-20, UBiquitin Conjugating enzyme, [RH, Score=216, Expect=2e-71]} {Smed: dd_Smed_v6_2631_0_1, dd_Smed_v6_2631_0_1, [RH, Score=256, Expect=1e-87]} {RNA1509_19861} {RNA1310_30343, RNA1509_19861} {RNA1509_19861, RNA815_23409.1} |
| 9. | MligTC455_22171 | 1082 | 22.54 | Mlig455_029400 | Neo: Int S/G2/M Age: Down-Down-Up |
CPSF2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_029400 {REF} {Length: 2518} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=196.3]; Beta-Casp domain [PF10996.10, score=67.7]; Cleavage and polyadenylation factor 2 C-terminal [PF13299.8, score=58.1]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=38.0]; Beta-lactamase superfamily domain [PF12706.9, score=22.2]; Metallo-beta-lactamase superfamily [PF00753.29, score=21.1]} {Human: ENSG00000165934, CPSF2, cleavage and polyadenylation specific factor 2, [RH, Score=485, Expect=1e-160]} {Mouse: ENSMUSG00000041781, Cpsf2, cleavage and polyadenylation specific factor 2, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0027873, Cpsf100, Cleavage and polyadenylation specificity factor 100, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00017313, cpsf-2, Probable cleavage and polyadenylation specificity factor subunit 2, [RH, Score=400, Expect=1e-127]} {Smed: dd_Smed_v6_5812_0_1, dd_Smed_v6_5812_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_6127} {RNA1310_6453} {RNA815_10477} |
| 10. | MligTC455_22324 | 507 | 10.57 | Mlig455_007036 | Neo: - Age: - Region-enriched R5: 2.145/0.00033 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_007036 {REF} {Length: 1833} {TRANSSPLICED} {RNA1509_22840, RNA1509_40911} {RNA1310_17288, RNA1509_22840, RNA1509_40911} {RNA1509_22840, RNA1509_40911, RNA815_6634} | |
| 11. | MligTC455_48167 | 1275 | 26.56 | Mlig455_044657 | Neo: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_044657 {REF} {Length: 826} {TRANSSPLICED} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1310_35474, RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520, RNA815_20690.1} | |
| 12. | MligTC455_16536 | 423 | 8.82 | Mlig455_013585 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.104/0.02354 |
QTRT1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_013585 {REF} {Length: 1956} {TRANSSPLICED} {Pfam: Queuine tRNA-ribosyltransferase [PF01702.20, score=344.2]} {Human: ENSG00000213339, QTRT1, queuine tRNA-ribosyltransferase catalytic subunit 1, [Score=366, Expect=1e-125]} {Mouse: ENSMUSG00000002825, Qtrt1, queuine tRNA-ribosyltransferase catalytic subunit 1, [Score=348, Expect=6e-119]} {Dmel: FBgn0031321, Tgt, tRNA-guanine transglycosylase, [Score=335, Expect=1e-113]} {Celegans: WBGene00006566, tgt-1, Queuine tRNA-ribosyltransferase catalytic subunit, [Score=297, Expect=4e-99]} {Smed: dd_Smed_v6_11928_0_1, dd_Smed_v6_11928_0_1, [Score=344, Expect=4e-117]} {RNA1509_24881, RNA1509_53487} {RNA1310_13217, RNA1509_53487} {RNA1509_53487, RNA815_4983} |
| 13. | MligTC455_16659 | 262 | 5.45 | Mlig455_056303 | Neo: - Age: - |
CENPA | 0.953 | - | - | - | - | - | 0.953 | Mlig455_056303 {REF} {Length: 2267} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.0]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=76.3, Expect=4e-16]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469} {RNA815_14172} |
| 14. | MligTC455_40748 | 290 | 6.04 | Mlig455_033303 | Neo: Int S/G2/M Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_033303 {REF} {Length: 1959} {RNA1509_9055} {RNA1310_20842, RNA1509_9055} {RNA1509_9055, RNA815_9420} | |
| 15. | MligTC455_19419 | 546 | 11.37 | Mlig455_007981 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 2.360/0.00027 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_007981 {REF} {Length: 2650} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=38.6]} {RNA1509_28433, RNA1509_33646} {RNA1310_17456.1, RNA1509_28433, RNA1509_33646} {RNA1509_28433, RNA1509_33646, RNA815_21443} | |
| 16. | MligTC455_49104 | 341 | 7.1 | Mlig455_001510 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_001510 {REF} {Length: 1131} {TRANSSPLICED} {Pfam: M-phase phosphoprotein 6 [PF10175.11, score=49.4]} {Mouse: ENSMUSG00000031843, Mphosph6, M phase phosphoprotein 6, [RH, Score=58.5, Expect=3e-10]} {RNA1509_9931} {RNA1310_29022} {RNA815_25246} |
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