Data search
Results for MligTC455_10568
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10568 | 17 | 0.35 | Mlig455_013740 | Neo: - Age: Down-Up-Up |
Mlig455_013740 {REF} {Length: 2931} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=30.8]} {RNA1509_52100} {RNA1310_9595} {RNA815_2737.1} |
Cumulative graph for MligTC455_10568
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.491 | 0.681 | 0.99995 | 1.00000 | |
| RegionR2 | 2.841 | 0.681 | 0.99992 | 1.00000 | |
| RegionR3 | 0.437 | 0.681 | 0.99993 | 1.00000 | |
| RegionR4 | -2.994 | 0.681 | 0.99981 | 1.00000 | |
| RegionR5 | -0.86 | 0.681 | 0.99996 | 1.00000 | |
| RegionR6 | -0.156 | 0.681 | 1.00000 | 1.00000 | |
| RegionR7 | 1.241 | 0.681 | 0.99997 | 1.00000 | |
| RegionR8 | 1.983 | 0.681 | 0.99996 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.166 | 0.681 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.233 | 0.681 | 0.99982 | 1.00000 | |
| RegenerationR3 | 0.771 | 0.681 | 0.99993 | 1.00000 | |
| RegenerationR4 | 2.754 | 0.681 | 0.99988 | 1.00000 | |
| RegenerationR5 | 1.569 | 0.681 | 0.99957 | 1.00000 | |
| RegenerationR6 | -0.701 | 0.681 | 0.99995 | 1.00000 | |
| RegenerationBL | 2.806 | 0.681 | 0.99994 | 1.00000 | |
| RegenerationTP | -1.609 | 0.681 | 0.99994 | 1.00000 |
Genes with expression patterns similar to MligTC455_10568
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10568 | 17 | 0.35 | Mlig455_013740 | Neo: - Age: Down-Up-Up |
1 | - | - | - | - | 1.000 | - | Mlig455_013740 {REF} {Length: 2931} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=30.8]} {RNA1509_52100} {RNA1310_9595} {RNA815_2737.1} | |
| 2. | MligTC455_15540 | 90 | 1.87 | Mlig455_004018 | Neo: - |
SYT7 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_004018 {REF} {Length: 2288} {Pfam: C2 domain [PF00168.32, score=65.8]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=109, Expect=3e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=107, Expect=2e-25]; ENSG00000067715, SYT1, synaptotagmin 1, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=107, Expect=1e-25]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=1e-24]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=110, Expect=1e-26]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=1e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=104, Expect=4e-25]} {RNA1509_38256} {RNA1310_13836} {RNA815_4752.1} |
| 3. | MligTC455_09842 | 13 | 0.26 | Mlig455_024365 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_024365 {REF} {Length: 1100} {NoTransDecoderORF} {RNA1509_26203} {RNA1310_61622} {RNA815_33312} | |
| 4. | MligTC455_07583 | 10 | 0.2 | Mlig455_012410 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_012410 {REF} {Length: 1743} {Pfam: Glycine rich protein [PF12810.9, score=21.4]} | |
| 5. | MligTC455_45860 | 592 | 12.33 | Mlig455_068725 | Neo: - Age: - Region-enriched R5: 1.333/0.00360 Regeneration-upregulated BL: 2.131 Regeneration-enriched BL: 2.131 |
FARSB | 0.952 | - | - | - | - | 0.952 | - | Mlig455_068725 {REF} {Length: 2890} {TRANSSPLICED} {Pfam: Phenylalanyl tRNA synthetase beta chain CLM domain [PF17759.3, score=166.1]; Phe-tRNA synthetase beta subunit B1 domain [PF18262.3, score=103.5]; B3/4 domain [PF03483.19, score=78.5]; tRNA synthetase B5 domain [PF03484.17, score=60.9]} {Human: ENSG00000116120, FARSB, phenylalanyl-tRNA synthetase subunit beta, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000026245, Farsb, phenylalanyl-tRNA synthetase, beta subunit, [RH, Score=679, Expect=0.0]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [RH, Score=672, Expect=0.0]} {Celegans: WBGene00001498, fars-3, Phenylalanine--tRNA ligase beta subunit, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_2020_0_1, dd_Smed_v6_2020_0_1, [RH, Score=505, Expect=1e-173]} {RNA1509_10740, RNA1509_18703} {RNA1310_12802, RNA1509_10740, RNA1509_18703} {RNA1509_10740, RNA1509_18703, RNA815_4058} |
| 6. | MligTC455_25840 | 20 | 0.42 | Mlig455_064699 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_064699 {REF} {Length: 912} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=25.9]} {RNA1509_20661} {RNA1310_17207} {RNA815_60369} |
Berezikov Lab - 2020-2021 © ERIBA