TomoSeq data search

Data search

Results for MligTC455_45860

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45860	592	12.33	Mlig455_068725	Neo: - Age: - Region-enriched R5: 1.333/0.00360 Regeneration-upregulated BL: 2.131 Regeneration-enriched BL: 2.131	FARSB	Mlig455_068725 {REF} {Length: 2890} {TRANSSPLICED} {Pfam: Phenylalanyl tRNA synthetase beta chain CLM domain [PF17759.3, score=166.1]; Phe-tRNA synthetase beta subunit B1 domain [PF18262.3, score=103.5]; B3/4 domain [PF03483.19, score=78.5]; tRNA synthetase B5 domain [PF03484.17, score=60.9]} {Human: ENSG00000116120, FARSB, phenylalanyl-tRNA synthetase subunit beta, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000026245, Farsb, phenylalanyl-tRNA synthetase, beta subunit, [RH, Score=679, Expect=0.0]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [RH, Score=672, Expect=0.0]} {Celegans: WBGene00001498, fars-3, Phenylalanine--tRNA ligase beta subunit, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_2020_0_1, dd_Smed_v6_2020_0_1, [RH, Score=505, Expect=1e-173]} {RNA1509_10740, RNA1509_18703} {RNA1310_12802, RNA1509_10740, RNA1509_18703} {RNA1509_10740, RNA1509_18703, RNA815_4058}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45860

592

12.33

Mlig455_068725

Neo: -

Age: -

Region-enriched R5: 1.333/0.00360

Regeneration-upregulated BL: 2.131

Regeneration-enriched BL: 2.131

FARSB

Mlig455_068725 {REF} {Length: 2890} {TRANSSPLICED} {Pfam: Phenylalanyl tRNA synthetase beta chain CLM domain [PF17759.3, score=166.1]; Phe-tRNA synthetase beta subunit B1 domain [PF18262.3, score=103.5]; B3/4 domain [PF03483.19, score=78.5]; tRNA synthetase B5 domain [PF03484.17, score=60.9]} {Human: ENSG00000116120, FARSB, phenylalanyl-tRNA synthetase subunit beta, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000026245, Farsb, phenylalanyl-tRNA synthetase, beta subunit, [RH, Score=679, Expect=0.0]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [RH, Score=672, Expect=0.0]} {Celegans: WBGene00001498, fars-3, Phenylalanine--tRNA ligase beta subunit, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_2020_0_1, dd_Smed_v6_2020_0_1, [RH, Score=505, Expect=1e-173]} {RNA1509_10740, RNA1509_18703} {RNA1310_12802, RNA1509_10740, RNA1509_18703} {RNA1509_10740, RNA1509_18703, RNA815_4058}

Cumulative graph for MligTC455_45860

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.964	3.978	0.51451	1.00000
RegionR2	0.61	3.978	0.26085	0.64192
RegionR3	0.17	3.978	0.69583	1.00000
RegionR4	0.514	3.978	0.31771	0.63399
RegionR5	1.333	3.978	0.00027	0.00360
RegionR6	0.395	3.978	0.38369	0.96201
RegionR7	-0.125	3.978	0.83512	1.00000
RegionR8	-1.932	3.978	0.03574	0.37098

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.16	3.978	0.34863	1.00000
RegenerationR2	0.412	3.978	0.31857	0.75678
RegenerationR3	0.132	3.978	0.78695	0.97767
RegenerationR4	0.52	3.978	0.27878	0.72392
RegenerationR5	-0.298	3.978	0.48076	0.84686
RegenerationR6	0.495	3.978	0.29632	0.64678
RegenerationBL	2.131	3.978	0.00007	0.00353	Specific for BL: 2.131
RegenerationTP	1.181	3.978	0.10290	0.49767

Genes with expression patterns similar to MligTC455_45860

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45860	592	12.33	Mlig455_068725	Neo: - Age: - Region-enriched R5: 1.333/0.00360 Regeneration-upregulated BL: 2.131 Regeneration-enriched BL: 2.131	FARSB	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068725 {REF} {Length: 2890} {TRANSSPLICED} {Pfam: Phenylalanyl tRNA synthetase beta chain CLM domain [PF17759.3, score=166.1]; Phe-tRNA synthetase beta subunit B1 domain [PF18262.3, score=103.5]; B3/4 domain [PF03483.19, score=78.5]; tRNA synthetase B5 domain [PF03484.17, score=60.9]} {Human: ENSG00000116120, FARSB, phenylalanyl-tRNA synthetase subunit beta, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000026245, Farsb, phenylalanyl-tRNA synthetase, beta subunit, [RH, Score=679, Expect=0.0]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [RH, Score=672, Expect=0.0]} {Celegans: WBGene00001498, fars-3, Phenylalanine--tRNA ligase beta subunit, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_2020_0_1, dd_Smed_v6_2020_0_1, [RH, Score=505, Expect=1e-173]} {RNA1509_10740, RNA1509_18703} {RNA1310_12802, RNA1509_10740, RNA1509_18703} {RNA1509_10740, RNA1509_18703, RNA815_4058}
2.	MligTC455_36527	56	1.16	Mlig455_017613	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_017613 {REF} {Length: 1129} {NoTransDecoderORF} {RNA1509_40709} {RNA1310_18972} {RNA815_34163}
3.	MligTC455_31454	356	7.43	Mlig455_029490, Mlig455_051217, Mlig455_067551	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_029490 {REF} {Length: 1086} {TRANSSPLICED} {Pfam: Cytoplasmic repetitive antigen (CRA) like repeat [PF07046.13, score=27.5]; Essential protein Yae1, N terminal [PF09811.11, score=21.7]} {RNA1509_41792} {RNA1310_59954.1} {RNA815_37033} Mlig455_051217 {REF} {Length: 1036} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41792} {RNA1310_59954.1} {RNA815_36681.1} Mlig455_067551 {REF} {Length: 2356} {RNA1509_41792} {RNA1310_45184.1, RNA1509_41792} {RNA1509_41792, RNA815_37033}
4.	MligTC455_10568	17	0.35	Mlig455_013740	Neo: - Age: Down-Up-Up		0.952	-	-	-	-	0.952	-	Mlig455_013740 {REF} {Length: 2931} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=30.8]} {RNA1509_52100} {RNA1310_9595} {RNA815_2737.1}
5.	MligTC455_25840	20	0.42	Mlig455_064699	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_064699 {REF} {Length: 912} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=25.9]} {RNA1509_20661} {RNA1310_17207} {RNA815_60369}