TomoSeq data search

Data search

Results for MligTC455_25840

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25840	20	0.42	Mlig455_064699	Neo: - Age: -		Mlig455_064699 {REF} {Length: 912} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=25.9]} {RNA1509_20661} {RNA1310_17207} {RNA815_60369}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_25840

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.595	0.61	1.00000	1.00000
RegionR2	2.058	0.61	0.99995	1.00000
RegionR3	0.176	0.61	0.99994	1.00000
RegionR4	-2.38	0.61	0.99982	1.00000
RegionR5	-0.882	0.61	0.99996	1.00000
RegionR6	-0.345	0.61	1.00000	1.00000
RegionR7	1.032	0.61	0.99998	1.00000
RegionR8	1.934	0.61	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.428	0.61	1.00000	1.00000
RegenerationR2	1.142	0.61	0.99986	1.00000
RegenerationR3	-0.255	0.61	1.00000	1.00000
RegenerationR4	1.935	0.61	0.99958	1.00000
RegenerationR5	1.765	0.61	0.99963	1.00000
RegenerationR6	-0.677	0.61	0.99995	1.00000
RegenerationBL	2.7	0.61	0.99958	1.00000
RegenerationTP	-1.393	0.61	0.99994	1.00000

Genes with expression patterns similar to MligTC455_25840

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25840	20	0.42	Mlig455_064699	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_064699 {REF} {Length: 912} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=25.9]} {RNA1509_20661} {RNA1310_17207} {RNA815_60369}
2.	MligTC455_10568	17	0.35	Mlig455_013740	Neo: - Age: Down-Up-Up		0.951	-	-	-	-	0.951	-	Mlig455_013740 {REF} {Length: 2931} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=30.8]} {RNA1509_52100} {RNA1310_9595} {RNA815_2737.1}
3.	MligTC455_45860	592	12.33	Mlig455_068725	Neo: - Age: - Region-enriched R5: 1.333/0.00360 Regeneration-upregulated BL: 2.131 Regeneration-enriched BL: 2.131	FARSB	0.951	-	-	-	-	0.951	-	Mlig455_068725 {REF} {Length: 2890} {TRANSSPLICED} {Pfam: Phenylalanyl tRNA synthetase beta chain CLM domain [PF17759.3, score=166.1]; Phe-tRNA synthetase beta subunit B1 domain [PF18262.3, score=103.5]; B3/4 domain [PF03483.19, score=78.5]; tRNA synthetase B5 domain [PF03484.17, score=60.9]} {Human: ENSG00000116120, FARSB, phenylalanyl-tRNA synthetase subunit beta, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000026245, Farsb, phenylalanyl-tRNA synthetase, beta subunit, [RH, Score=679, Expect=0.0]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [RH, Score=672, Expect=0.0]} {Celegans: WBGene00001498, fars-3, Phenylalanine--tRNA ligase beta subunit, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_2020_0_1, dd_Smed_v6_2020_0_1, [RH, Score=505, Expect=1e-173]} {RNA1509_10740, RNA1509_18703} {RNA1310_12802, RNA1509_10740, RNA1509_18703} {RNA1509_10740, RNA1509_18703, RNA815_4058}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_25840

0.42

Mlig455_064699

Neo: -

Age: -

1.000

Mlig455_064699 {REF} {Length: 912} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=25.9]} {RNA1509_20661} {RNA1310_17207} {RNA815_60369}

MligTC455_10568

0.35

Mlig455_013740

Neo: -

Age: Down-Up-Up

0.951

Mlig455_013740 {REF} {Length: 2931} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=30.8]} {RNA1509_52100} {RNA1310_9595} {RNA815_2737.1}

MligTC455_45860

592

12.33

Mlig455_068725

Neo: -

Age: -

Region-enriched R5: 1.333/0.00360

Regeneration-upregulated BL: 2.131

Regeneration-enriched BL: 2.131

FARSB

0.951

Mlig455_068725 {REF} {Length: 2890} {TRANSSPLICED} {Pfam: Phenylalanyl tRNA synthetase beta chain CLM domain [PF17759.3, score=166.1]; Phe-tRNA synthetase beta subunit B1 domain [PF18262.3, score=103.5]; B3/4 domain [PF03483.19, score=78.5]; tRNA synthetase B5 domain [PF03484.17, score=60.9]} {Human: ENSG00000116120, FARSB, phenylalanyl-tRNA synthetase subunit beta, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000026245, Farsb, phenylalanyl-tRNA synthetase, beta subunit, [RH, Score=679, Expect=0.0]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [RH, Score=672, Expect=0.0]} {Celegans: WBGene00001498, fars-3, Phenylalanine--tRNA ligase beta subunit, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_2020_0_1, dd_Smed_v6_2020_0_1, [RH, Score=505, Expect=1e-173]} {RNA1509_10740, RNA1509_18703} {RNA1310_12802, RNA1509_10740, RNA1509_18703} {RNA1509_10740, RNA1509_18703, RNA815_4058}