Data search
Results for MligTC455_38733
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38733 | 112 | 2.34 | Mlig455_004261 | Neo: - Age: Down-Up-Down |
BCKDHB | Mlig455_004261 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=142.2]; Transketolase, C-terminal domain [PF02780.22, score=100.8]; Domain of unknown function DUF108 [PF01958.20, score=66.6]; Homoserine dehydrogenase, NAD binding domain [PF03447.18, score=50.6]} {Human: ENSG00000083123, BCKDHB, branched chain keto acid dehydrogenase E1 subunit beta, [Score=478, Expect=3e-165]} {Mouse: ENSMUSG00000032263, Bckdhb, branched chain ketoacid dehydrogenase E1, beta polypeptide, [Score=481, Expect=1e-166]} {Dmel: FBgn0039993, CG17691, [Score=419, Expect=1e-142]} {Celegans: WBGene00006518, bckd-1B, Branched Chain Keto acid Dehydrogenase e1 (E1) subunit, [Score=386, Expect=5e-130]} {Smed: dd_Smed_v6_2949_0_1, dd_Smed_v6_2949_0_1, [Score=410, Expect=3e-140]} {RNA1509_14939} {RNA1310_14019} {RNA815_14107} |
Cumulative graph for MligTC455_38733
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 3.738 | 2.17 | 0.08458 | 0.63278 | |
| RegionR2 | -1.909 | 2.17 | 0.99835 | 1.00000 | |
| RegionR3 | 1.001 | 2.17 | 0.18392 | 0.71703 | |
| RegionR4 | 2.347 | 2.17 | 0.01569 | 0.08530 | |
| RegionR5 | 0.352 | 2.17 | 0.58418 | 0.94252 | |
| RegionR6 | 0.878 | 2.17 | 0.27582 | 0.86580 | |
| RegionR7 | -0.443 | 2.17 | 0.93224 | 1.00000 | |
| RegionR8 | -5.965 | 2.17 | 0.02975 | 0.33636 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.003 | 2.17 | 0.14800 | 0.88929 | |
| RegenerationR2 | -0.153 | 2.17 | 0.84167 | 1.00000 | |
| RegenerationR3 | -1.591 | 2.17 | 0.01402 | 0.21721 | |
| RegenerationR4 | -1.378 | 2.17 | 0.06093 | 0.39549 | |
| RegenerationR5 | -0.337 | 2.17 | 0.56441 | 0.89368 | |
| RegenerationR6 | -0.344 | 2.17 | 0.57927 | 0.85728 | |
| RegenerationBL | -3.112 | 2.17 | 1.00000 | 1.00000 | |
| RegenerationTP | 1.065 | 2.17 | 0.60043 | 0.96119 |
Genes with expression patterns similar to MligTC455_38733
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38733 | 112 | 2.34 | Mlig455_004261 | Neo: - Age: Down-Up-Down |
BCKDHB | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004261 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=142.2]; Transketolase, C-terminal domain [PF02780.22, score=100.8]; Domain of unknown function DUF108 [PF01958.20, score=66.6]; Homoserine dehydrogenase, NAD binding domain [PF03447.18, score=50.6]} {Human: ENSG00000083123, BCKDHB, branched chain keto acid dehydrogenase E1 subunit beta, [Score=478, Expect=3e-165]} {Mouse: ENSMUSG00000032263, Bckdhb, branched chain ketoacid dehydrogenase E1, beta polypeptide, [Score=481, Expect=1e-166]} {Dmel: FBgn0039993, CG17691, [Score=419, Expect=1e-142]} {Celegans: WBGene00006518, bckd-1B, Branched Chain Keto acid Dehydrogenase e1 (E1) subunit, [Score=386, Expect=5e-130]} {Smed: dd_Smed_v6_2949_0_1, dd_Smed_v6_2949_0_1, [Score=410, Expect=3e-140]} {RNA1509_14939} {RNA1310_14019} {RNA815_14107} |
| 2. | MligTC455_32811 | 764 | 15.92 | Mlig455_026793, Mlig455_051806 | Neo: - Age: - |
RAB43 | 1.706 | - | - | - | - | 0.962 | 0.744 | Mlig455_026793 {REF} {Length: 2681} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.7]; ADP-ribosylation factor family [PF00025.23, score=49.5]; AAA domain [PF13401.8, score=19.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=18.8]; 50S ribosome-binding GTPase [PF01926.25, score=18.7]} {Human: ENSG00000172780, RAB43, RAB43, member RAS oncogene family, [RH, Score=248, Expect=1e-83]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [RH, Score=238, Expect=4e-80]} {Dmel: FBgn0015793, Rab19, [RH, Score=224, Expect=2e-74]} {Celegans: WBGene00004278, rab-19, RAB family, [RH, Score=231, Expect=1e-77]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [RH, Score=276, Expect=2e-95]} {RNA1509_22843} {RNA1310_16768, RNA1509_22843} {RNA1509_22843, RNA815_20284} Mlig455_051806 {REF} {Length: 2724} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.7]; ADP-ribosylation factor family [PF00025.23, score=49.5]; AAA domain [PF13401.8, score=19.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=18.8]; 50S ribosome-binding GTPase [PF01926.25, score=18.7]} {Human: ENSG00000172780, RAB43, RAB43, member RAS oncogene family, [RH, Score=247, Expect=3e-83]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [RH, Score=238, Expect=9e-80]} {Dmel: FBgn0015793, Rab19, [RH, Score=223, Expect=3e-74]} {Celegans: WBGene00004278, rab-19, RAB family, [RH, Score=229, Expect=7e-77]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [RH, Score=275, Expect=7e-95]} {RNA1509_22843, RNA1509_39313} {RNA1310_16768, RNA1509_39313} {RNA1509_39313, RNA815_20284} |
| 3. | MligTC455_21658 | 97 | 2.02 | Mlig455_048689, Mlig455_048720 | Neo: - Age: - |
LMO1 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_048689 {REF} {Length: 2106} {Pfam: LIM domain [PF00412.24, score=88.3]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=184, Expect=1e-59]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=181, Expect=2e-58]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=181, Expect=1e-58]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=180, Expect=2e-58]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=196, Expect=4e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=8e-18]} {Smed: dd_Smed_v6_6263_0_1, dd_Smed_v6_6263_0_1, [RH, Score=139, Expect=3e-42]} {RNA1509_12583} {RNA1310_56294} {RNA815_40845} Mlig455_048720 {REF} {Length: 2081} {Pfam: LIM domain [PF00412.24, score=90.0]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=186, Expect=1e-60]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=183, Expect=2e-59]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=183, Expect=1e-59]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=183, Expect=1e-59]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=198, Expect=1e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=7e-18]} {Smed: dd_Smed_v6_17422_0_1, dd_Smed_v6_17422_0_1, [RH, Score=140, Expect=6e-42]} {RNA1310_56294} {RNA815_40845} |
| 4. | MligTC455_40593 | 7 | 0.14 | Mlig455_069780 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | - | 0.953 | - | Mlig455_069780 {REF} {Length: 1128} {TRANSSPLICED} {RNA1509_10472} {RNA1310_55432} {RNA815_50993} | |
| 5. | MligTC455_35590 | 154 | 3.2 | Mlig455_048408 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.700/0.02240 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_048408 {REF} {Length: 4279} {TRANSSPLICED} {RNA1509_19998} {RNA1310_6168} {RNA815_25757} | |
| 6. | MligTC455_10705 | 24 | 0.5 | Mlig455_032848 | Neo: Int S/G2/M Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_032848 {REF} {Length: 4340} {Pfam: F5/8 type C domain [PF00754.27, score=25.3]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=50.4, Expect=5e-08]} {RNA1509_42928} {RNA1310_28879} {RNA815_25813.1} |