TomoSeq data search

Data search

Results for MligTC455_10949

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10949

2342

48.79

Mlig455_034538

Neo: -

Age: -

Region-enriched R4: 1.038/0.01693

ARPC5

Mlig455_034538 {REF} {Length: 1904} {TRANSSPLICED} {Pfam: ARP2/3 complex 16 kDa subunit (p16-Arc) [PF04699.16, score=141.1]; Dip2/Utp12 Family [PF04003.14, score=24.4]} {Human: ENSG00000162704, ARPC5, actin related protein 2/3 complex subunit 5, [RH, Score=138, Expect=4e-42]} {Mouse: ENSMUSG00000008475, Arpc5, actin related protein 2/3 complex, subunit 5, [RH, Score=138, Expect=4e-42]} {Dmel: FBgn0031437, Arpc5, Actin-related protein 2/3 complex, subunit 5, [RH, Score=124, Expect=9e-37]} {Celegans: WBGene00000205, arx-7, Actin-related protein 2/3 complex subunit 5, [RH, Score=88.6, Expect=6e-23]} {Smed: dd_Smed_v6_781_0_1, dd_Smed_v6_781_0_1, [RH, Score=103, Expect=6e-29]} {RNA1509_3008, RNA1509_4650} {RNA1310_34556, RNA1509_3008} {RNA1509_3008, RNA815_15796.1}

Cumulative graph for MligTC455_10949

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.087	5.713	0.00689	0.25587
RegionR2	-0.248	5.713	0.47783	0.86246
RegionR3	0.403	5.713	0.15529	0.66641
RegionR4	1.038	5.713	0.00186	0.01693
RegionR5	0.507	5.713	0.06601	0.22854
RegionR6	0.496	5.713	0.08480	0.53664
RegionR7	0.237	5.713	0.46381	1.00000
RegionR8	-0.347	5.713	0.38468	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.034	5.713	0.97769	1.00000
RegenerationR2	0.228	5.713	0.47538	0.86070
RegenerationR3	-0.14	5.713	0.67615	0.93920
RegenerationR4	-0.342	5.713	0.32391	0.76163
RegenerationR5	-0.005	5.713	0.98682	1.00000
RegenerationR6	-0.429	5.713	0.20752	0.55042
RegenerationBL	-0.406	5.713	0.25334	0.61012
RegenerationTP	0.613	5.713	0.08859	0.46916

Genes with expression patterns similar to MligTC455_10949

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10949	2342	48.79	Mlig455_034538	Neo: - Age: - Region-enriched R4: 1.038/0.01693	ARPC5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034538 {REF} {Length: 1904} {TRANSSPLICED} {Pfam: ARP2/3 complex 16 kDa subunit (p16-Arc) [PF04699.16, score=141.1]; Dip2/Utp12 Family [PF04003.14, score=24.4]} {Human: ENSG00000162704, ARPC5, actin related protein 2/3 complex subunit 5, [RH, Score=138, Expect=4e-42]} {Mouse: ENSMUSG00000008475, Arpc5, actin related protein 2/3 complex, subunit 5, [RH, Score=138, Expect=4e-42]} {Dmel: FBgn0031437, Arpc5, Actin-related protein 2/3 complex, subunit 5, [RH, Score=124, Expect=9e-37]} {Celegans: WBGene00000205, arx-7, Actin-related protein 2/3 complex subunit 5, [RH, Score=88.6, Expect=6e-23]} {Smed: dd_Smed_v6_781_0_1, dd_Smed_v6_781_0_1, [RH, Score=103, Expect=6e-29]} {RNA1509_3008, RNA1509_4650} {RNA1310_34556, RNA1509_3008} {RNA1509_3008, RNA815_15796.1}
2.	MligTC455_34724	4929	102.68	Mlig455_029265	Neo: Int S/G2/M Age: logFC(26M/2M)=0.253	IGF2BP1	0.966	-	-	-	-	0.966	-	Mlig455_029265 {REF} {Length: 1871} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=103.7]; KH domain [PF07650.19, score=36.6]; KH domain [PF13083.8, score=33.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.1]} {Human: ENSG00000159217, IGF2BP1, insulin like growth factor 2 mRNA binding protein 1, [RH, Score=125, Expect=5e-31]; ENSG00000073792, IGF2BP2, insulin like growth factor 2 mRNA binding protein 2, [RH, Score=123, Expect=2e-30]} {Mouse: ENSMUSG00000013415, Igf2bp1, insulin-like growth factor 2 mRNA binding protein 1, [RH, Score=129, Expect=1e-32]; ENSMUSG00000033581, Igf2bp2, insulin-like growth factor 2 mRNA binding protein 2, [RH, Score=125, Expect=1e-31]} {Dmel: FBgn0285926, Imp, IGF-II mRNA-binding protein, [Score=143, Expect=1e-37]} {Celegans: WBGene00010908, zbp-1, Zipcode Binding Protein homolog, [RH, Score=87.0, Expect=2e-18]} {Smed: dd_Smed_v6_3047_0_1, dd_Smed_v6_3047_0_1, [Score=154, Expect=2e-41]} {RNA1509_15136, RNA1509_15998, RNA1509_21756, RNA1509_3179} {RNA1310_15501.1, RNA1509_15136, RNA1509_15998, RNA1509_21756, RNA1509_3179} {RNA1509_15136, RNA1509_15998, RNA1509_21756, RNA1509_3179, RNA815_7080.1}
3.	MligTC455_49210	1095	22.81	Mlig455_028977	Neo: - Age: logFC(26M/2M)=-0.312		0.961	-	-	-	-	0.961	-	Mlig455_028977 {REF} {Length: 2435} {Pfam: Tudor domain [PF00567.26, score=103.7]} {RNA1509_39286, RNA1509_6444} {RNA1310_4547.1, RNA1509_39286} {RNA1509_39286, RNA815_4209}
4.	MligTC455_24806	13314	277.38	Mlig455_070013	Neo: - Age: - Region-enriched R7: 1.265/0.00023 Regeneration-downregulated BL: -1.782 Regeneration-depleted BL: -1.782		0.954	-	-	-	0.954	-	-	Mlig455_070013 {REF} {Length: 1645} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1310_57754.2, RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1509_1534, RNA1509_43581, RNA1509_841, RNA815_27242}
5.	MligTC455_48107	736	15.33	Mlig455_034751	Neo: - Age: - Region-enriched R2: 1.355/0.02257	STXBP1	0.951	-	-	-	-	0.951	-	Mlig455_034751 {REF} {Length: 3899} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=402.2]} {Human: ENSG00000136854, STXBP1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Mouse: ENSMUSG00000026797, Stxbp1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Dmel: FBgn0004574, Rop, Ras opposite, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00006757, unc-18, Putative acetylcholine regulator unc-18, [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_7111_0_1, dd_Smed_v6_7111_0_1, [RH, Score=809, Expect=0.0]} {RNA1509_17547, RNA1509_29963, RNA1509_4729, RNA1509_7850} {RNA1310_11788.1, RNA1509_17547, RNA1509_29963, RNA1509_7850} {RNA1509_17547, RNA1509_29963, RNA1509_7850, RNA815_1201}

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