Data search
Results for MligTC455_24806
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24806 | 13314 | 277.38 | Mlig455_070013 | Neo: - Age: - Region-enriched R7: 1.265/0.00023 Regeneration-downregulated BL: -1.782 Regeneration-depleted BL: -1.782 |
Mlig455_070013 {REF} {Length: 1645} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1310_57754.2, RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1509_1534, RNA1509_43581, RNA1509_841, RNA815_27242} |
Cumulative graph for MligTC455_24806
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.071 | 8.17 | 0.00001 | 0.00761 | |
| RegionR2 | 0.224 | 8.17 | 0.52165 | 0.89578 | |
| RegionR3 | -0.103 | 8.17 | 0.73967 | 1.00000 | |
| RegionR4 | -0.601 | 8.17 | 0.08276 | 0.27100 | |
| RegionR5 | -0.294 | 8.17 | 0.33168 | 0.67691 | |
| RegionR6 | 0.91 | 8.17 | 0.00135 | 0.04683 | |
| RegionR7 | 1.265 | 8.17 | 0.00000 | 0.00023 | |
| RegionR8 | 0.669 | 8.17 | 0.02688 | 0.32006 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.01 | 8.17 | 0.07014 | 0.75209 | |
| RegenerationR2 | -0.63 | 8.17 | 0.10360 | 0.50762 | |
| RegenerationR3 | -0.156 | 8.17 | 0.69064 | 0.94454 | |
| RegenerationR4 | 0.173 | 8.17 | 0.66707 | 0.94121 | |
| RegenerationR5 | 0.314 | 8.17 | 0.41822 | 0.81013 | |
| RegenerationR6 | -0.721 | 8.17 | 0.06618 | 0.32294 | |
| RegenerationBL | -1.782 | 8.17 | 0.00000 | 0.00017 | Specific for BL: -1.782 |
| RegenerationTP | 0.138 | 8.17 | 0.69847 | 1.00000 |
Genes with expression patterns similar to MligTC455_24806
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24806 | 13314 | 277.38 | Mlig455_070013 | Neo: - Age: - Region-enriched R7: 1.265/0.00023 Regeneration-downregulated BL: -1.782 Regeneration-depleted BL: -1.782 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070013 {REF} {Length: 1645} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1310_57754.2, RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1509_1534, RNA1509_43581, RNA1509_841, RNA815_27242} | |
| 2. | MligTC455_24804 | 9938 | 207.05 | Mlig455_016852 | Neo: - Age: Down-Up-Down Region-enriched R7: 1.271/0.00174 Regeneration-downregulated BL: -2.176 Regeneration-depleted BL: -2.176 |
3.706 | - | 0.962 | 0.951 | 0.962 | 0.831 | - | Mlig455_016852 {REF} {Length: 655} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.6]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.7, Expect=2e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.2, Expect=4e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=71.6, Expect=1e-17]} {RNA1509_43581} {RNA1310_57754.2} {RNA815_27242} | |
| 3. | MligTC455_24805 | 4322 | 90.04 | Mlig455_065919 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.454 Region-enriched R7: 1.214/0.00538 Regeneration-downregulated BL: -1.666 Regeneration-depleted BL: -1.666 |
3.555 | - | 0.921 | - | 0.921 | 0.979 | 0.734 | Mlig455_065919 {REF} {Length: 723} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534} {RNA1310_57754.2} {RNA815_27242} | |
| 4. | MligTC455_36369 | 60657 | 1263.68 | Mlig455_001046 | Neo: - Age: logFC(26M/2M)=-0.400 Region-enriched R8: 3.548/0.00437 |
3.304 | - | 0.728 | 0.837 | 0.789 | 0.950 | - | Mlig455_001046 {REF} {Length: 2775} {RNA1509_12} {RNA1310_32388} {RNA815_7102.2} | |
| 5. | MligTC455_09240 | 297 | 6.19 | Mlig455_023411 | Neo: - Age: Down-Up-Down Region-enriched R7: 5.816/0.00000 |
1.659 | - | 0.702 | - | - | 0.957 | - | Mlig455_023411 {REF} {Length: 2218} {RNA1509_41055} {RNA1310_11481.1} {RNA815_19026} | |
| 6. | MligTC455_19855 | 903 | 18.8 | Mlig455_052736 | Neo: - Age: - |
TMEM167B | 0.968 | - | - | - | - | 0.968 | - | Mlig455_052736 {REF} {Length: 816} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=39.2]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [Score=103, Expect=3e-30]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [Score=102, Expect=3e-30]} {Dmel: FBgn0040890, ksh, kish, [Score=42.7, Expect=1e-06]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=9e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=98.6, Expect=7e-29]} {RNA1509_49711, RNA1509_57502} {RNA1310_41303.1, RNA1509_49711, RNA1509_57502} {RNA1509_49711, RNA1509_57502, RNA815_21949} |
| 7. | MligTC455_35662 | 648 | 13.49 | Mlig455_014775, Mlig455_014834 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_014775 {REF} {Length: 663} {NoTransDecoderORF} {RNA1509_28209} {RNA1310_105301} {RNA815_27262} Mlig455_014834 {REF} {Length: 710} {NoTransDecoderORF} {RNA1509_28209} {RNA1310_105301} {RNA815_27262} |
|
| 8. | MligTC455_10949 | 2342 | 48.79 | Mlig455_034538 | Neo: - Age: - Region-enriched R4: 1.038/0.01693 |
ARPC5 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_034538 {REF} {Length: 1904} {TRANSSPLICED} {Pfam: ARP2/3 complex 16 kDa subunit (p16-Arc) [PF04699.16, score=141.1]; Dip2/Utp12 Family [PF04003.14, score=24.4]} {Human: ENSG00000162704, ARPC5, actin related protein 2/3 complex subunit 5, [RH, Score=138, Expect=4e-42]} {Mouse: ENSMUSG00000008475, Arpc5, actin related protein 2/3 complex, subunit 5, [RH, Score=138, Expect=4e-42]} {Dmel: FBgn0031437, Arpc5, Actin-related protein 2/3 complex, subunit 5, [RH, Score=124, Expect=9e-37]} {Celegans: WBGene00000205, arx-7, Actin-related protein 2/3 complex subunit 5, [RH, Score=88.6, Expect=6e-23]} {Smed: dd_Smed_v6_781_0_1, dd_Smed_v6_781_0_1, [RH, Score=103, Expect=6e-29]} {RNA1509_3008, RNA1509_4650} {RNA1310_34556, RNA1509_3008} {RNA1509_3008, RNA815_15796.1} |
Berezikov Lab - 2020-2021 © ERIBA