TomoSeq data search

Data search

Results for MligTC455_11037

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11037	4	0.07	Mlig455_015372	Neo: Germline Age: -		Mlig455_015372 {REF} {Length: 1729} {TRANSSPLICED} {RNA1509_11322} {RNA1310_10909, RNA1509_11322} {RNA1509_11322, RNA815_6367}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_11037

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_11037

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11037	4	0.07	Mlig455_015372	Neo: Germline Age: -		1	-	-	-	-	1.000	-	Mlig455_015372 {REF} {Length: 1729} {TRANSSPLICED} {RNA1509_11322} {RNA1310_10909, RNA1509_11322} {RNA1509_11322, RNA815_6367}
2.	MligTC455_49065	14	0.3	Mlig455_043341	Neo: - Age: Up-Down-Down		0.997	-	-	-	-	0.997	-	Mlig455_043341 {REF} {Length: 1303} {RNA1509_13254} {RNA1310_39169.1} {RNA815_7078}
3.	MligTC455_51335	30	0.63	Mlig455_037293	Neo: Irradiation Age: Up-Down-Down	ZBTB34	0.996	-	-	-	-	0.996	-	Mlig455_037293 {REF} {Length: 2504} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=36.5]; Zinc-finger double domain [PF13465.8, score=29.8]; C2H2-type zinc finger [PF13894.8, score=23.3]} {Human: ENSG00000177125, ZBTB34, zinc finger and BTB domain containing 34, [Score=65.9, Expect=6e-11]; ENSG00000006194, ZNF263, zinc finger protein 263, [Score=63.9, Expect=3e-10]; ENSG00000172006, ZNF554, zinc finger protein 554, [Score=62.8, Expect=8e-10]} {Mouse: ENSMUSG00000068966, Zbtb34, zinc finger and BTB domain containing 34, [Score=66.2, Expect=4e-11]} {Dmel: FBgn0267033, mamo, maternal gene required for meiosis, [Score=63.5, Expect=3e-10]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=59.7, Expect=1e-09]} {Smed: dd_Smed_v6_15473_0_1, dd_Smed_v6_15473_0_1, [RH, Score=112, Expect=1e-27]} {RNA1509_54064} {RNA1310_16424.1} {RNA815_20401}
4.	MligTC455_13320	89	1.86	Mlig455_053529	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.356	NYNRIN	0.992	-	-	-	-	0.992	-	Mlig455_053529 {REF} {Length: 4500} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=69.6]; Integrase zinc binding domain [PF17921.3, score=55.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=50.2]; Integrase core domain [PF00665.28, score=32.1]; Integrase core domain [PF13683.8, score=19.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.4, Expect=3e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.4, Expect=2e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=70.9, Expect=6e-13]} {RNA1509_23236} {RNA1310_5873, RNA1509_23236} {RNA1509_23236, RNA815_17089}
5.	MligTC455_38461	183	3.81	Mlig455_013666	Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=0.606		0.984	-	-	-	-	0.984	-	Mlig455_013666 {REF} {Length: 1545} {Pfam: Glycine rich protein [PF12810.9, score=29.9]} {RNA1509_28715} {RNA1310_39036} {RNA815_34674}
6.	MligTC455_20795	11	0.24	Mlig455_008349	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_008349 {REF} {Length: 4610} {Pfam: Retrotransposon gag protein [PF03732.19, score=22.2]; Ty3 transposon capsid-like protein [PF19259.1, score=19.3]} {RNA1509_17212, RNA1509_46224} {RNA1310_1773, RNA1509_46224} {RNA1509_46224, RNA815_1548}
7.	MligTC455_11703	17	0.36	Mlig455_029773, Mlig455_029926	Neo: Int S/G2/M Age: -		0.974	-	-	-	-	0.974	-	Mlig455_029773 {REF} {Length: 696} Mlig455_029926 {REF} {Length: 1413} {NoTransDecoderORF}
8.	MligTC455_09967	35	0.73	Mlig455_036501	Neo: Germline Age: Up-Down-Down	FAM78A	0.973	-	-	-	-	0.973	-	Mlig455_036501 {REF} {Length: 2139} {Human: ENSG00000126882, FAM78A, family with sequence similarity 78 member A, [Score=54.3, Expect=1e-07]} {Mouse: ENSMUSG00000050592, Fam78a, family with sequence similarity 78, member A, [Score=53.9, Expect=1e-07]} {RNA1310_22983.1} {RNA815_35701}
9.	MligTC455_14867	241	5.02	Mlig455_000599	Neo: Germline Age: Up-Down-Down Region-specific R4: 5.558 Region-enriched R4: 2.939/0.00075		0.972	-	-	-	-	0.972	-	Mlig455_000599 {REF} {Length: 1388} {RNA1509_23571} {RNA1310_38169} {RNA815_28435.1}
10.	MligTC455_36943	155	3.24	Mlig455_055780	Neo: Germline Age: logFC(26M/2M)=0.682		0.963	-	-	-	-	0.963	-	Mlig455_055780 {REF} {Length: 1433} {RNA1509_38822} {RNA1310_60976} {RNA815_35161}
11.	MligTC455_05838	8	0.16	Mlig455_001943	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_001943 {REF} {Length: 603} {NoTransDecoderORF} {RNA1310_58091}
12.	MligTC455_07649	18	0.38	Mlig455_058757	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_058757 {REF} {Length: 981} {RNA1310_29105} {RNA815_44614}
13.	MligTC455_08312	9	0.18	Mlig455_066070	Neo: - Age: -	BCL11A	0.959	-	-	-	-	0.959	-	Mlig455_066070 {REF} {Length: 1033} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=47.3]; Zinc-finger double domain [PF13465.8, score=32.8]; C2H2-type zinc finger [PF13894.8, score=31.7]; C2H2-type zinc-finger domain [PF13909.8, score=24.4]} {Human: ENSG00000119866, BCL11A, B cell CLL/lymphoma 11A, [Score=127, Expect=8e-33]; ENSG00000127152, BCL11B, B cell CLL/lymphoma 11B, [Score=125, Expect=3e-32]} {Mouse: ENSMUSG00000000861, Bcl11a, B cell CLL/lymphoma 11A (zinc finger protein), [Score=126, Expect=6e-33]; ENSMUSG00000048251, Bcl11b, B cell leukemia/lymphoma 11B, [Score=125, Expect=2e-32]} {Dmel: FBgn0029939, CG9650, [Score=138, Expect=5e-37]} {Celegans: WBGene00017430, bcl-11, Mammalian BCL (B cell lymphoma) gene homologs, [Score=117, Expect=4e-30]} {Smed: dd_Smed_v6_10320_0_1, dd_Smed_v6_10320_0_1, [Score=136, Expect=1e-38]}
14.	MligTC455_11786	31	0.65	Mlig455_054525, Mlig455_055444, Mlig455_055454	Neo: - Age: logFC(26M/2M)=0.732	NUCB1	0.959	-	-	-	-	0.959	-	Mlig455_054525 {REF} {Length: 1787} {TRANSSPLICED} {Human: ENSG00000104805, NUCB1, nucleobindin 1, [Score=174, Expect=4e-51]; ENSG00000070081, NUCB2, nucleobindin 2, [Score=168, Expect=9e-50]} {Mouse: ENSMUSG00000030824, Nucb1, nucleobindin 1, [Score=180, Expect=2e-53]} {Dmel: FBgn0052190, NUCB1, [Score=157, Expect=4e-44]} {Celegans: WBGene00009674, nucb-1, NUCleoBindin homolog, [Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_1728_0_1, dd_Smed_v6_1728_0_1, [Score=214, Expect=3e-67]} {RNA1509_7514} {RNA1310_17099} {RNA815_6975} Mlig455_055444 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=25.2]; EF-hand domain [PF13405.8, score=22.8]; EF-hand domain pair [PF13499.8, score=22.4]} {Human: ENSG00000104805, NUCB1, nucleobindin 1, [Score=191, Expect=5e-56]; ENSG00000070081, NUCB2, nucleobindin 2, [Score=190, Expect=4e-56]} {Mouse: ENSMUSG00000030824, Nucb1, nucleobindin 1, [Score=198, Expect=4e-59]; ENSMUSG00000030659, Nucb2, nucleobindin 2, [Score=190, Expect=2e-56]} {Dmel: FBgn0052190, NUCB1, [Score=181, Expect=9e-52]} {Celegans: WBGene00009674, nucb-1, NUCleoBindin homolog, [Score=158, Expect=3e-44]} {Smed: dd_Smed_v6_1728_0_1, dd_Smed_v6_1728_0_1, [Score=244, Expect=1e-77]} {RNA1509_7514} {RNA1310_17099} {RNA815_6975} Mlig455_055454 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=22.8]; EF-hand domain pair [PF13499.8, score=22.4]; EF hand [PF00036.34, score=21.3]} {Human: ENSG00000104805, NUCB1, nucleobindin 1, [Score=191, Expect=6e-56]; ENSG00000070081, NUCB2, nucleobindin 2, [Score=188, Expect=1e-55]} {Mouse: ENSMUSG00000030824, Nucb1, nucleobindin 1, [Score=198, Expect=4e-59]; ENSMUSG00000030659, Nucb2, nucleobindin 2, [Score=189, Expect=8e-56]} {Dmel: FBgn0052190, NUCB1, [Score=182, Expect=3e-52]} {Celegans: WBGene00009674, nucb-1, NUCleoBindin homolog, [Score=156, Expect=1e-43]} {Smed: dd_Smed_v6_1728_0_1, dd_Smed_v6_1728_0_1, [Score=246, Expect=4e-78]} {RNA1509_7514} {RNA1310_17099} {RNA815_6975}
15.	MligTC455_49895	7	0.15	Mlig455_039642	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_039642 {REF} {Length: 837}
16.	MligTC455_13455	107	2.24	Mlig455_048184	Neo: - Age: - Region-enriched R2: 5.623/0.00020	ACSS2	0.958	-	-	-	-	0.958	-	Mlig455_048184 {REF} {Length: 3531} {Pfam: AMP-binding enzyme [PF00501.30, score=292.3]; AMP-binding enzyme C-terminal domain [PF13193.8, score=82.0]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=49.1]} {Human: ENSG00000131069, ACSS2, acyl-CoA synthetase short chain family member 2, [Score=632, Expect=0.0]} {Mouse: ENSMUSG00000027605, Acss2, acyl-CoA synthetase short-chain family member 2, [Score=627, Expect=0.0]} {Dmel: FBgn0012034, AcCoAS, Acetyl Coenzyme A synthase, [Score=668, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=585, Expect=0.0]} {Smed: dd_Smed_v6_1817_0_1, dd_Smed_v6_1817_0_1, [Score=642, Expect=0.0]} {RNA1310_58555} {RNA815_29982}
17.	MligTC455_20834	4	0.09	Mlig455_063684	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_063684 {REF} {Length: 1209} {Pfam: THAP domain [PF05485.14, score=43.8]} {RNA1509_48033} {RNA1310_58376} {RNA815_51419}
18.	MligTC455_35596	3	0.06	Mlig455_011790	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_011790 {REF} {Length: 1005} {Pfam: Lectin C-type domain [PF00059.23, score=25.0]} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=65.1, Expect=1e-12]} {RNA1509_20946} {RNA1310_71370} {RNA815_4785.4}
19.	MligTC455_03327	13	0.28	Mlig455_031640	Neo: Irradiation Age: Up-Down-Down		0.955	-	-	-	-	0.955	-	Mlig455_031640 {REF} {Length: 1631} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=19.8]} {RNA1310_16409} {RNA815_28638}
20.	MligTC455_07016	48	1.01	Mlig455_069269	Neo: Germline Age: -		0.955	-	-	-	-	0.955	-	Mlig455_069269 {REF} {Length: 549} {TRANSSPLICED} {RNA1509_59261} {RNA1310_56270, RNA1509_59261} {RNA1509_59261, RNA815_30228}
21.	MligTC455_09413	5	0.1	Mlig455_023788, Mlig455_066352	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_023788 {REF} {Length: 2296} {NoTransDecoderORF} {RNA1310_52035} Mlig455_066352 {REF} {Length: 1683} {NoTransDecoderORF} {RNA1310_52035}
22.	MligTC455_14868	200	4.17	Mlig455_030329	Neo: Germline Age: - Region-specific R4: 6.971 Region-enriched R4: 2.943/0.03814		0.955	-	-	-	-	0.955	-	Mlig455_030329 {REF} {Length: 187} {NoTransDecoderORF} {RNA1509_23571} {RNA1310_58943} {RNA815_50089}
23.	MligTC455_53480	31	0.64	Mlig455_043390, Mlig455_043414, Mlig455_043557	Neo: - Age: -	WSCD2	0.954	-	-	-	-	0.954	-	Mlig455_043390 {REF} {Length: 1215} {Pfam: WSC domain [PF01822.21, score=50.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=59.7, Expect=2e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=2e-10]} {RNA1310_30552} {RNA815_18175} Mlig455_043414 {REF} {Length: 1144} {Pfam: WSC domain [PF01822.21, score=46.1]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=56.2, Expect=8e-09]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.4, Expect=3e-09]} {RNA1310_30552} {RNA815_18175} Mlig455_043557 {REF} {Length: 1209} {Pfam: WSC domain [PF01822.21, score=32.4]} {RNA1310_30552} {RNA815_18175}
24.	MligTC455_17392	11	0.23	Mlig455_001448	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_001448 {REF} {Length: 2293} {TRANSSPLICED} {RNA1509_28752} {RNA1310_59892} {RNA815_54202}
25.	MligTC455_34853	23	0.47	Mlig455_045034	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_045034 {REF} {Length: 2444} {RNA1310_85929} {RNA815_43650}
26.	MligTC455_15885	53	1.11	Mlig455_056818	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_056818 {REF} {Length: 1663} {TRANSSPLICED} {RNA1310_38551} {RNA815_43586}
27.	MligTC455_10776	11	0.22	Mlig455_032885	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_032885 {REF} {Length: 215} {NoTransDecoderORF} {RNA1310_126376} {RNA815_59053.1}
28.	MligTC455_24875	169	3.51	Mlig455_024688	Neo: - Age: Up-Down-Down	TRMT1	0.95	-	-	-	-	0.950	-	Mlig455_024688 {REF} {Length: 5380} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=377.8]; Met-10+ like-protein [PF02475.18, score=24.1]; O-methyltransferase [PF01596.19, score=20.7]; Methyltransferase domain [PF13847.8, score=19.8]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [RH, Score=358, Expect=6e-115]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [RH, Score=377, Expect=3e-122]} {Dmel: FBgn0032430, CG6388, [RH, Score=375, Expect=1e-122]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [RH, Score=340, Expect=5e-110]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [RH, Score=385, Expect=5e-128]} {RNA1509_25954, RNA1509_38572} {RNA1310_16273.1, RNA1509_25954, RNA1509_38572} {RNA1509_25954, RNA1509_38572, RNA815_13455}
29.	MligTC455_24876	162	3.37	Mlig455_024713	Neo: - Age: -	TRMT1	0.95	-	-	-	-	0.950	-	Mlig455_024713 {REF} {Length: 2723} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=378.3]; Met-10+ like-protein [PF02475.18, score=24.1]; O-methyltransferase [PF01596.19, score=20.8]; Methyltransferase domain [PF13847.8, score=20.0]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [RH, Score=358, Expect=5e-115]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [RH, Score=376, Expect=3e-122]} {Dmel: FBgn0032430, CG6388, [RH, Score=376, Expect=4e-123]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [RH, Score=340, Expect=5e-110]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [RH, Score=385, Expect=5e-128]} {RNA1509_25954} {RNA1310_16273.1} {RNA815_13455}