M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_34853

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34853 23 0.47 Mlig455_045034

Neo: -

Age: -

 Mlig455_045034 {REF} {Length: 2444} {RNA1310_85929} {RNA815_43650}

Cumulative graph for MligTC455_34853

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.758 0.786 0.99986 1.00000
RegionR2 0.225 0.786 0.85195 1.00000
RegionR3 1.108 0.786 0.58327 1.00000
RegionR4 -0.022 0.786 0.84475 1.00000
RegionR5 -1.201 0.786 0.97456 1.00000
RegionR6 1.712 0.786 0.51012 1.00000
RegionR7 1.467 0.786 0.54008 1.00000
RegionR8 -2.531 0.786 0.99983 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.372 0.786 0.99995 1.00000
RegenerationR2 -0.257 0.786 0.99690 1.00000
RegenerationR3 -1.861 0.786 0.42421 0.81798
RegenerationR4 2.614 0.786 0.36238 0.78844
RegenerationR5 1.351 0.786 0.58587 0.90319
RegenerationR6 -0.539 0.786 0.91694 1.00000
RegenerationBL -2.18 0.786 0.99994 1.00000
RegenerationTP -2.046 0.786 0.99996 1.00000


Genes with expression patterns similar to MligTC455_34853

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34853 23 0.47 Mlig455_045034

Neo: -

Age: -

 4 1.000 - 1.000 - 1.000 1.000 Mlig455_045034 {REF} {Length: 2444} {RNA1310_85929} {RNA815_43650}
2. MligTC455_20370 41 0.85 Mlig455_046379

Neo: -

Age: Down-Up-Down

 1.879 - - 0.913 - 0.966 - Mlig455_046379 {REF} {Length: 1870} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.6]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Family of unknown function (DUF5537) [PF17690.3, score=19.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=76.3, Expect=3e-14]} {RNA1509_51609} {RNA1310_24791} {RNA815_28268}
3. MligTC455_15828 52 1.09 Mlig455_069315

Neo: -

Age: Down-Up-Down

 NOG 1.799 - - 0.954 - - 0.845 Mlig455_069315 {REF} {Length: 2237} {Pfam: Noggin [PF05806.14, score=105.4]} {Human: ENSG00000183691, NOG, noggin, [RH, Score=87.8, Expect=3e-20]} {Mouse: ENSMUSG00000048616, Nog, noggin, [RH, Score=87.8, Expect=2e-20]} {Smed: dd_Smed_v6_15423_0_1, dd_Smed_v6_15423_0_1, [RH, Score=119, Expect=1e-32]} {RNA1310_31637} {RNA815_28948}
4. MligTC455_06683 25 0.53 Mlig455_038711

Neo: -

Age: -

 1.774 - - - - 0.984 0.790 Mlig455_038711 {REF} {Length: 2325} {RNA1509_50394} {RNA1310_76063}
5. MligTC455_35918 88 1.84 Mlig455_014115, Mlig455_017871

Neo: -

Age: -

 1.681 - - 0.981 - 0.700 -

Mlig455_014115 {REF} {Length: 495} {NoTransDecoderORF} {RNA1509_55603} {RNA1310_2284.3} {RNA815_7655.1}

Mlig455_017871 {REF} {Length: 2843} {RNA1509_6226} {RNA1310_15973} {RNA815_15474}
6. MligTC455_01710 41 0.85 Mlig455_013827

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_013827 {REF} {Length: 2546} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.2]} {RNA1310_100507} {RNA815_49026}
7. MligTC455_05042 25 0.52 Mlig455_034061

Neo: -

Age: -

Regeneration-downregulated R4: -4.663

Regeneration-depleted R4: -4.663

 1 - - - - 1.000 - Mlig455_034061 {REF} {Length: 767} {NoTransDecoderORF} {RNA1310_34081} {RNA815_16786}
8. MligTC455_17533 156 3.25 Mlig455_018291

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_018291 {REF} {Length: 1866} {TRANSSPLICED} {RNA1509_48476} {RNA1310_24654.1} {RNA815_19410}
9. MligTC455_32778 38 0.8 Mlig455_001655

Neo: Irradiation

Age: Up-Down-Down

 1 - - - - 1.000 - Mlig455_001655 {REF} {Length: 1600} {RNA1509_58771} {RNA1310_5707} {RNA815_6105.1}
10. MligTC455_38652 14 0.28 Mlig455_053085

Neo: -

Age: logFC(26M/2M)=3.457

 1 - - 1.000 - - - Mlig455_053085 {REF} {Length: 1326} {RNA1310_36111} {RNA815_20767}
11. MligTC455_07016 48 1.01 Mlig455_069269

Neo: Germline

Age: -

 0.999 - - - - 0.999 - Mlig455_069269 {REF} {Length: 549} {TRANSSPLICED} {RNA1509_59261} {RNA1310_56270, RNA1509_59261} {RNA1509_59261, RNA815_30228}
12. MligTC455_09413 5 0.1 Mlig455_023788, Mlig455_066352

Neo: -

Age: -

 0.999 - - - - 0.999 -

Mlig455_023788 {REF} {Length: 2296} {NoTransDecoderORF} {RNA1310_52035}

Mlig455_066352 {REF} {Length: 1683} {NoTransDecoderORF} {RNA1310_52035}
13. MligTC455_35596 3 0.06 Mlig455_011790

Neo: -

Age: -

 0.999 - - - - 0.999 - Mlig455_011790 {REF} {Length: 1005} {Pfam: Lectin C-type domain [PF00059.23, score=25.0]} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=65.1, Expect=1e-12]} {RNA1509_20946} {RNA1310_71370} {RNA815_4785.4}
14. MligTC455_20834 4 0.09 Mlig455_063684

Neo: -

Age: -

 0.998 - - - - 0.998 - Mlig455_063684 {REF} {Length: 1209} {Pfam: THAP domain [PF05485.14, score=43.8]} {RNA1509_48033} {RNA1310_58376} {RNA815_51419}
15. MligTC455_21777 298 6.21 Mlig455_028207, Mlig455_063571

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.714

 0.998 - - - - 0.998 -

Mlig455_028207 {REF} {Length: 1710} {RNA1509_42567, RNA1509_7932} {RNA1310_29963, RNA1509_42567, RNA1509_7932} {RNA1509_42567, RNA1509_7932, RNA815_28272}

Mlig455_063571 {REF} {Length: 1693} {RNA1509_42567} {RNA1310_29963} {RNA815_28272}
16. MligTC455_00778 5 0.11 Mlig455_027260

Neo: -

Age: -

 0.997 - - - - 0.997 - Mlig455_027260 {REF} {Length: 293} {NoTransDecoderORF} {RNA1310_20699} {RNA815_39334}
17. MligTC455_02346 4 0.08 Mlig455_037954

Neo: -

Age: -

 0.997 - - - - 0.997 - Mlig455_037954 {REF} {Length: 1324} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=35.5]} {Smed: dd_Smed_v6_11247_0_1, dd_Smed_v6_11247_0_1, [Score=50.8, Expect=6e-07]} {RNA1509_35288} {RNA1310_20633} {RNA815_8208}
18. MligTC455_07364 30 0.62 Mlig455_048587, Mlig455_048667

Neo: Germline

Age: logFC(26M/2M)=0.756

 FAT1 0.997 - - - - 0.997 -

Mlig455_048587 {REF} {Length: 2253} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=51.2, Expect=7e-06]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=50.1, Expect=9e-06]} {Smed: dd_Smed_v6_66040_0_1, dd_Smed_v6_66040_0_1, [Score=123, Expect=3e-31]} {RNA1310_22000.1} {RNA815_18099}

Mlig455_048667 {REF} {Length: 1815} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=51.2, Expect=4e-06]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=50.1, Expect=6e-06]} {Smed: dd_Smed_v6_66040_0_1, dd_Smed_v6_66040_0_1, [Score=124, Expect=5e-32]} {RNA1310_22000.1} {RNA815_44720}
19. MligTC455_15258 5 0.11 Mlig455_032578

Neo: -

Age: -

 AVPR1A 0.997 - - - - 0.997 - Mlig455_032578 {REF} {Length: 2627} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=109.3]; G protein-coupled glucose receptor regulating Gpa2 [PF11710.10, score=20.7]} {Human: ENSG00000166148, AVPR1A, arginine vasopressin receptor 1A, [Score=93.6, Expect=3e-20]} {Mouse: ENSMUSG00000020123, Avpr1a, arginine vasopressin receptor 1A, [Score=89.0, Expect=9e-19]; ENSMUSG00000026432, Avpr1b, arginine vasopressin receptor 1B, [Score=86.7, Expect=4e-18]} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=157, Expect=3e-42]} {Celegans: WBGene00018798, gnrr-1, GoNadotropin-Releasing hormone Receptor (GnRHR) related, [Score=94.4, Expect=7e-21]} {Smed: dd_Smed_v6_75337_0_1, dd_Smed_v6_75337_0_1, [Score=110, Expect=2e-27]} {RNA1310_92117}
20. MligTC455_33451 55 1.15 Mlig455_061693

Neo: Germline

Age: Down-Down-Up

 0.997 - - - - 0.997 - Mlig455_061693 {REF} {Length: 1301} {Pfam: Family of unknown function (DUF6453) [PF20051.1, score=19.4]} {RNA1509_47001} {RNA1310_55207.1} {RNA815_29866}
21. MligTC455_19150 71 1.49 Mlig455_056501

Neo: -

Age: -

Region-specific R4: 6.975

Region-enriched R4: 6.367/0.00088

 0.996 - - - - 0.996 - Mlig455_056501 {REF} {Length: 729} {RNA1509_11166} {RNA1310_49744.1} {RNA815_25242}
22. MligTC455_11632 18 0.38 Mlig455_064774

Neo: -

Age: -

 CFAP126 0.995 - - 0.995 - - - Mlig455_064774 {REF} {Length: 2533} {Human: ENSG00000188931, CFAP126, cilia and flagella associated protein 126, [Score=59.7, Expect=5e-10]} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [Score=63.2, Expect=3e-11]} {RNA1310_44557.2} {RNA815_31853}
23. MligTC455_08295 6 0.12 Mlig455_053314

Neo: -

Age: -

 0.994 - - - - 0.994 - Mlig455_053314 {REF} {Length: 408} {NoTransDecoderORF} {RNA1509_57939} {RNA1310_84831}
24. MligTC455_10991 207 4.31 Mlig455_011837, Mlig455_013118

Neo: Irradiation

Age: Down-Up-Down

 EGR4 0.992 - - 0.992 - - -

Mlig455_011837 {REF} {Length: 1687} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.2]; Zinc-finger double domain [PF13465.8, score=47.8]; C2H2-type zinc finger [PF13894.8, score=41.0]; C2H2-type zinc-finger domain [PF13909.8, score=23.2]} {Human: ENSG00000135625, EGR4, early growth response 4, [Score=107, Expect=3e-24]; ENSG00000179388, EGR3, early growth response 3, [Score=103, Expect=6e-24]; ENSG00000120738, EGR1, early growth response 1, [Score=102, Expect=6e-23]} {Mouse: ENSMUSG00000071341, Egr4, early growth response 4, [Score=107, Expect=9e-25]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=103, Expect=6e-24]; ENSMUSG00000038418, Egr1, early growth response 1, [Score=102, Expect=4e-23]} {Dmel: FBgn0013469, klu, klumpfuss, [RH, Score=130, Expect=2e-32]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [RH, Score=133, Expect=8e-34]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=137, Expect=1e-36]} {RNA1509_38897} {RNA1310_16481} {RNA815_46371}

Mlig455_013118 {REF} {Length: 1946} {RNA1509_38897} {RNA1310_16481, RNA1509_38897} {RNA1509_38897, RNA815_46371}
25. MligTC455_14867 241 5.02 Mlig455_000599

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.558

Region-enriched R4: 2.939/0.00075

 0.992 - - - - 0.992 - Mlig455_000599 {REF} {Length: 1388} {RNA1509_23571} {RNA1310_38169} {RNA815_28435.1}
26. MligTC455_05838 8 0.16 Mlig455_001943

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_001943 {REF} {Length: 603} {NoTransDecoderORF} {RNA1310_58091}
27. MligTC455_07649 18 0.38 Mlig455_058757

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_058757 {REF} {Length: 981} {RNA1310_29105} {RNA815_44614}
28. MligTC455_08312 9 0.18 Mlig455_066070

Neo: -

Age: -

 BCL11A 0.991 - - - - 0.991 - Mlig455_066070 {REF} {Length: 1033} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=47.3]; Zinc-finger double domain [PF13465.8, score=32.8]; C2H2-type zinc finger [PF13894.8, score=31.7]; C2H2-type zinc-finger domain [PF13909.8, score=24.4]} {Human: ENSG00000119866, BCL11A, B cell CLL/lymphoma 11A, [Score=127, Expect=8e-33]; ENSG00000127152, BCL11B, B cell CLL/lymphoma 11B, [Score=125, Expect=3e-32]} {Mouse: ENSMUSG00000000861, Bcl11a, B cell CLL/lymphoma 11A (zinc finger protein), [Score=126, Expect=6e-33]; ENSMUSG00000048251, Bcl11b, B cell leukemia/lymphoma 11B, [Score=125, Expect=2e-32]} {Dmel: FBgn0029939, CG9650, [Score=138, Expect=5e-37]} {Celegans: WBGene00017430, bcl-11, Mammalian BCL (B cell lymphoma) gene homologs, [Score=117, Expect=4e-30]} {Smed: dd_Smed_v6_10320_0_1, dd_Smed_v6_10320_0_1, [Score=136, Expect=1e-38]}
29. MligTC455_11786 31 0.65 Mlig455_054525, Mlig455_055444, Mlig455_055454

Neo: -

Age: logFC(26M/2M)=0.732

 NUCB1 0.991 - - - - 0.991 -

Mlig455_054525 {REF} {Length: 1787} {TRANSSPLICED} {Human: ENSG00000104805, NUCB1, nucleobindin 1, [Score=174, Expect=4e-51]; ENSG00000070081, NUCB2, nucleobindin 2, [Score=168, Expect=9e-50]} {Mouse: ENSMUSG00000030824, Nucb1, nucleobindin 1, [Score=180, Expect=2e-53]} {Dmel: FBgn0052190, NUCB1, [Score=157, Expect=4e-44]} {Celegans: WBGene00009674, nucb-1, NUCleoBindin homolog, [Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_1728_0_1, dd_Smed_v6_1728_0_1, [Score=214, Expect=3e-67]} {RNA1509_7514} {RNA1310_17099} {RNA815_6975}

Mlig455_055444 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=25.2]; EF-hand domain [PF13405.8, score=22.8]; EF-hand domain pair [PF13499.8, score=22.4]} {Human: ENSG00000104805, NUCB1, nucleobindin 1, [Score=191, Expect=5e-56]; ENSG00000070081, NUCB2, nucleobindin 2, [Score=190, Expect=4e-56]} {Mouse: ENSMUSG00000030824, Nucb1, nucleobindin 1, [Score=198, Expect=4e-59]; ENSMUSG00000030659, Nucb2, nucleobindin 2, [Score=190, Expect=2e-56]} {Dmel: FBgn0052190, NUCB1, [Score=181, Expect=9e-52]} {Celegans: WBGene00009674, nucb-1, NUCleoBindin homolog, [Score=158, Expect=3e-44]} {Smed: dd_Smed_v6_1728_0_1, dd_Smed_v6_1728_0_1, [Score=244, Expect=1e-77]} {RNA1509_7514} {RNA1310_17099} {RNA815_6975}

Mlig455_055454 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=22.8]; EF-hand domain pair [PF13499.8, score=22.4]; EF hand [PF00036.34, score=21.3]} {Human: ENSG00000104805, NUCB1, nucleobindin 1, [Score=191, Expect=6e-56]; ENSG00000070081, NUCB2, nucleobindin 2, [Score=188, Expect=1e-55]} {Mouse: ENSMUSG00000030824, Nucb1, nucleobindin 1, [Score=198, Expect=4e-59]; ENSMUSG00000030659, Nucb2, nucleobindin 2, [Score=189, Expect=8e-56]} {Dmel: FBgn0052190, NUCB1, [Score=182, Expect=3e-52]} {Celegans: WBGene00009674, nucb-1, NUCleoBindin homolog, [Score=156, Expect=1e-43]} {Smed: dd_Smed_v6_1728_0_1, dd_Smed_v6_1728_0_1, [Score=246, Expect=4e-78]} {RNA1509_7514} {RNA1310_17099} {RNA815_6975}
30. MligTC455_18504 85 1.78 Mlig455_015015, Mlig455_038638

Neo: -

Age: -

 0.991 0.991 - - - - -

Mlig455_015015 {REF} {Length: 1382} {NoTransDecoderORF} {RNA1509_10728} {RNA1310_102527} {RNA815_20199}

Mlig455_038638 {REF} {Length: 3970} {RNA1509_10728} {RNA1310_102527} {RNA815_58474}
31. MligTC455_49895 7 0.15 Mlig455_039642

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_039642 {REF} {Length: 837}
32. MligTC455_14868 200 4.17 Mlig455_030329

Neo: Germline

Age: -

Region-specific R4: 6.971

Region-enriched R4: 2.943/0.03814

 0.989 - - - - 0.989 - Mlig455_030329 {REF} {Length: 187} {NoTransDecoderORF} {RNA1509_23571} {RNA1310_58943} {RNA815_50089}
33. MligTC455_07931 11 0.23 Mlig455_026270

Neo: -

Age: Up-Down-Down

 SLC16A2 0.987 - - - - 0.987 - Mlig455_026270 {REF} {Length: 2617} {Pfam: Major Facilitator Superfamily [PF07690.18, score=98.5]; Transmembrane secretion effector [PF05977.15, score=19.7]} {Human: ENSG00000147100, SLC16A2, solute carrier family 16 member 2, [Score=215, Expect=9e-62]} {Mouse: ENSMUSG00000033965, Slc16a2, solute carrier family 16 (monocarboxylic acid transporters), member 2, [Score=213, Expect=3e-61]; ENSMUSG00000019838, Slc16a10, solute carrier family 16 (monocarboxylic acid transporters), member 10, [Score=210, Expect=2e-60]} {Dmel: FBgn0001296, kar, karmoisin, [Score=235, Expect=2e-69]} {Celegans: WBGene00015273, mct-2, MonoCarboxylate Transporter family, [Score=73.6, Expect=2e-13]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=70.9, Expect=9e-13]} {RNA1509_27591} {RNA1310_12929} {RNA815_4877.1}
34. MligTC455_17392 11 0.23 Mlig455_001448

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_001448 {REF} {Length: 2293} {TRANSSPLICED} {RNA1509_28752} {RNA1310_59892} {RNA815_54202}
35. MligTC455_26427 15 0.31 Mlig455_054140

Neo: -

Age: logFC(26M/2M)=-1.151

 TRPM1 0.987 - - 0.987 - - - Mlig455_054140 {REF} {Length: 5171} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=79.8]; Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=40.4]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=38.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=57.8, Expect=1e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=56.6, Expect=3e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=57.0, Expect=1e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.2, Expect=6e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=3e-19]} {RNA1509_29189} {RNA1310_1181, RNA1509_29189} {RNA1509_29189, RNA815_1111.1}
36. MligTC455_10776 11 0.22 Mlig455_032885

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_032885 {REF} {Length: 215} {NoTransDecoderORF} {RNA1310_126376} {RNA815_59053.1}
37. MligTC455_13557 20 0.43 Mlig455_020342, Mlig455_041283

Neo: -

Age: -

 ASIC1 0.984 - - 0.984 - - -

Mlig455_020342 {REF} {Length: 4002} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=135.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_33503} {RNA1310_41267.1} {RNA815_38083}

Mlig455_041283 {REF} {Length: 3377} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=207.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=4e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=60.1, Expect=7e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=66.2, Expect=5e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=112, Expect=8e-26]} {RNA1509_33503} {RNA1310_18874} {RNA815_38083}
38. MligTC455_14680 11 0.23 Mlig455_038726

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_038726 {REF} {Length: 1588}
39. MligTC455_06714 20 0.41 Mlig455_058305

Neo: -

Age: -

 0.983 - - 0.983 - - - Mlig455_058305 {REF} {Length: 391} {NoTransDecoderORF}
40. MligTC455_31667 14 0.3 Mlig455_047051

Neo: -

Age: Down-Down-Down

 0.983 - - - - 0.983 - Mlig455_047051 {REF} {Length: 3464} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
41. MligTC455_07748 7 0.14 Mlig455_008972

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_008972 {REF} {Length: 898} {RNA1310_52744} {RNA815_35003}
42. MligTC455_04824 23 0.49 Mlig455_059470

Neo: -

Age: -

Region-enriched R8: 6.548/0.01820
Region-enriched R7: 5.424/0.01867

 0.981 - - - - 0.981 - Mlig455_059470 {REF} {Length: 674} {RNA1509_34011} {RNA1310_73489} {RNA815_44499}
43. MligTC455_09307 8 0.16 Mlig455_043212

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_043212 {REF} {Length: 373} {Pfam: NHL repeat [PF01436.23, score=23.2]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.8}
44. MligTC455_16825 83 1.73 Mlig455_004646, Mlig455_014982, Mlig455_033046, Mlig455_067354, Mlig455_070980

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.629/0.04385

 0.981 - - 0.981 - - -

Mlig455_004646 {REF} {Length: 513} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_014982 {REF} {Length: 176} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_033046 {REF} {Length: 514} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_067354 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_070980 {REF} {Length: 3436} {RNA1509_26883} {RNA1310_785} {RNA815_2080}
45. MligTC455_37303 21 0.43 Mlig455_020171

Neo: -

Age: -

 ZNF197 0.981 - - - - 0.981 - Mlig455_020171 {REF} {Length: 1573} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=60.3]; C2H2-type zinc finger [PF13894.8, score=49.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=26.5]; C2H2-type zinc finger [PF13912.8, score=22.1]; Transcription elongation factor Elf1 like [PF05129.15, score=19.6]} {Human: ENSG00000186448, ZNF197, zinc finger protein 197, [Score=67.0, Expect=6e-12]; ENSG00000281709, ZNF197, zinc finger protein 197, [Score=67.0, Expect=6e-12]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=67.0, Expect=5e-12]; ENSG00000131849, ZNF132, zinc finger protein 132, [Score=66.2, Expect=9e-12]; ENSG00000131845, ZNF304, zinc finger protein 304, [Score=64.3, Expect=4e-11]; ENSG00000196387, ZNF140, zinc finger protein 140, [Score=63.9, Expect=4e-11]} {Mouse: ENSMUSG00000023284, Zfp605, zinc finger protein 605, [Score=63.9, Expect=3e-11]; ENSMUSG00000079215, Zfp664, zinc finger protein 664, [Score=60.8, Expect=1e-10]} {Dmel: FBgn0020309, crol, crooked legs, [Score=61.2, Expect=2e-10]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=49.3, Expect=6e-07]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=49.3, Expect=5e-07]} {RNA1509_27079} {RNA1310_59040.1} {RNA815_26301}
46. MligTC455_38670 7 0.15 Mlig455_006879

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_006879 {REF} {Length: 795} {RNA1509_50839} {RNA1310_131129} {RNA815_18706.1}
47. MligTC455_12100 95 1.97 Mlig455_029365

Neo: -

Age: Down-Up-Down

Region-enriched R3: 3.875/0.00267

 0.979 - - 0.979 - - - Mlig455_029365 {REF} {Length: 1265} {RNA1509_49846} {RNA1310_39189, RNA1509_49846} {RNA1509_49846, RNA815_32261}
48. MligTC455_16575 52 1.07 Mlig455_005832

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_005832 {REF} {Length: 1785} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_26294}
49. MligTC455_37789 16 0.34 Mlig455_002723

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_002723 {REF} {Length: 349} {NoTransDecoderORF} {RNA1310_134759}
50. MligTC455_25374 428 8.91 Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

Regeneration-upregulated BL: 5.459

Regeneration-enriched BL: 5.459

 0.977 - - 0.977 - - -

Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463}

Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
51. MligTC455_28778 61 1.26 Mlig455_054196

Neo: -

Age: -

 ANKRD50 0.977 - - 0.977 - - - Mlig455_054196 {REF} {Length: 8618} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=74.9]; Ankyrin repeats (many copies) [PF13637.8, score=56.2]; Ankyrin repeats (many copies) [PF13857.8, score=49.7]; Ankyrin repeat [PF13606.8, score=46.0]; Ankyrin repeat [PF00023.32, score=41.1]; Mab-21 protein [PF03281.16, score=39.8]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=82.4, Expect=3e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=83.6, Expect=8e-16]} {Dmel: FBgn0039590, CG10011, [Score=69.7, Expect=1e-11]} {Celegans: WBGene00012124, T28D6.4, [Score=62.4, Expect=1e-09]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=85.1, Expect=1e-16]} {RNA1509_27730} {RNA1310_4352} {RNA815_2426.1}
52. MligTC455_48839 34 0.71 Mlig455_044331

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.630/0.00032

 0.977 - - - - 0.977 - Mlig455_044331 {REF} {Length: 1918} {RNA1509_41516} {RNA1310_26988, RNA1509_41516} {RNA1509_41516, RNA815_32873}
53. MligTC455_03327 13 0.28 Mlig455_031640

Neo: Irradiation

Age: Up-Down-Down

 0.976 - - - - 0.976 - Mlig455_031640 {REF} {Length: 1631} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=19.8]} {RNA1310_16409} {RNA815_28638}
54. MligTC455_13514 53 1.1 Mlig455_010467

Neo: Germline

Age: Down-Down-Down, logFC(26M/2M)=-1.228

 0.976 - - - - 0.976 - Mlig455_010467 {REF} {Length: 1212} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=49.7]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=92.4, Expect=1e-23]} {RNA1509_29748} {RNA1310_27208} {RNA815_13547.2}
55. MligTC455_31561 7 0.15 Mlig455_004487

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_004487 {REF} {Length: 1949} {NoTransDecoderORF} {RNA1509_5636} {RNA1310_43531.2} {RNA815_1180.1}
56. MligTC455_53480 31 0.64 Mlig455_043390, Mlig455_043414, Mlig455_043557

Neo: -

Age: -

 WSCD2 0.974 - - - - 0.974 -

Mlig455_043390 {REF} {Length: 1215} {Pfam: WSC domain [PF01822.21, score=50.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=59.7, Expect=2e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=2e-10]} {RNA1310_30552} {RNA815_18175}

Mlig455_043414 {REF} {Length: 1144} {Pfam: WSC domain [PF01822.21, score=46.1]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=56.2, Expect=8e-09]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.4, Expect=3e-09]} {RNA1310_30552} {RNA815_18175}

Mlig455_043557 {REF} {Length: 1209} {Pfam: WSC domain [PF01822.21, score=32.4]} {RNA1310_30552} {RNA815_18175}
57. MligTC455_16598 35 0.73 Mlig455_020223

Neo: -

Age: Up-Down-Up

 SLC32A1 0.973 0.973 - - - - - Mlig455_020223 {REF} {Length: 3130} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=268.0]} {Human: ENSG00000101438, SLC32A1, solute carrier family 32 member 1, [RH, Score=370, Expect=1e-121]} {Mouse: ENSMUSG00000037771, Slc32a1, solute carrier family 32 (GABA vesicular transporter), member 1, [RH, Score=376, Expect=4e-124]} {Dmel: FBgn0033911, VGAT, Vesicular GABA Transporter, [RH, Score=407, Expect=6e-136]} {Celegans: WBGene00006783, unc-47, Vesicular GABA transporter, [RH, Score=374, Expect=2e-124]} {Smed: dd_Smed_v6_13324_0_1, dd_Smed_v6_13324_0_1, [Score=176, Expect=3e-49]} {RNA1509_41798} {RNA1310_63541} {RNA815_44591}
58. MligTC455_30786 16 0.34 Mlig455_010220

Neo: -

Age: Up-Down-Down

 0.971 - - 0.971 - - - Mlig455_010220 {REF} {Length: 3201} {TRANSSPLICED} {RNA1509_34939} {RNA1310_613.1} {RNA815_8156}
59. MligTC455_56963 9 0.2 Mlig455_061778

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_061778 {REF} {Length: 642} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153}
60. MligTC455_16281 159 3.31 Mlig455_042437, Mlig455_042488

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.300

Region-specific R4: 6.491

Region-enriched R4: 3.498/0.00088

 0.97 - - - - 0.970 -

Mlig455_042437 {REF} {Length: 3615} {Pfam: Immunoglobulin domain [PF13927.8, score=19.8]; Immunoglobulin domain [PF13895.8, score=19.0]} {RNA1509_17265} {RNA1310_8841.1, RNA1509_17265} {RNA1509_17265, RNA815_10658}

Mlig455_042488 {REF} {Length: 2996} {Pfam: Immunoglobulin domain [PF13927.8, score=20.0]; Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 [PF12496.10, score=19.2]; Immunoglobulin domain [PF13895.8, score=19.1]} {RNA1509_17265} {RNA1310_8841.1} {RNA815_10658}
61. MligTC455_35250 61 1.26 Mlig455_000731

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_000731 {REF} {Length: 2188} {Celegans: WBGene00015646, mlt-10, [Score=168, Expect=5e-47]} {RNA1509_6125} {RNA1310_26090} {RNA815_7336}
62. MligTC455_45203 53 1.1 Mlig455_010181

Neo: Germline

Age: Down-Up-Down

 0.969 - - - - 0.969 - Mlig455_010181 {REF} {Length: 1154} {RNA1509_48085} {RNA1310_40804, RNA1509_48085} {RNA1509_48085, RNA815_27336}
63. MligTC455_04214 13 0.27 Mlig455_022345

Neo: -

Age: -

 HCN4 0.968 - - - - 0.968 - Mlig455_022345 {REF} {Length: 4342} {Pfam: Ion transport protein N-terminal [PF08412.12, score=85.6]; Ion transport protein [PF00520.33, score=81.4]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=517, Expect=7e-169]; ENSG00000164588, HCN1, hyperpolarization activated cyclic nucleotide gated potassium channel 1, [Score=504, Expect=1e-167]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=498, Expect=4e-165]; ENSG00000263324, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]; ENSG00000143630, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=510, Expect=2e-166]; ENSMUSG00000021730, Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1, [Score=506, Expect=5e-168]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=500, Expect=2e-166]; ENSMUSG00000028051, Hcn3, hyperpolarization-activated, cyclic nucleotide-gated K+ 3, [Score=494, Expect=2e-165]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [Score=611, Expect=0.0]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_13408_0_1, dd_Smed_v6_13408_0_1, [Score=741, Expect=0.0]} {RNA1509_8719} {RNA1310_25014} {RNA815_22259}
64. MligTC455_05546 106 2.22 Mlig455_001104

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_001104 {REF} {Length: 742} {NoTransDecoderORF} {RNA1509_54498} {RNA1310_15427} {RNA815_19080.1}
65. MligTC455_10079 41 0.86 Mlig455_005692

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_005692 {REF} {Length: 638}
66. MligTC455_35684 154 3.21 Mlig455_038829, Mlig455_038837, Mlig455_038838, Mlig455_038917

Neo: -

Age: Down-Down-Up

 0.967 - - 0.967 - - -

Mlig455_038829 {REF} {Length: 2614} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1}

Mlig455_038837 {REF} {Length: 2042} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1}

Mlig455_038838 {REF} {Length: 2563} {RNA1509_23775} {RNA1310_6695.1} {RNA815_5748.1}

Mlig455_038917 {REF} {Length: 2375} {TRANSSPLICED} {RNA1509_23775} {RNA1310_6695.2} {RNA815_5748.1}
67. MligTC455_05802 36 0.74 Mlig455_005206

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_005206 {REF} {Length: 444} {NoTransDecoderORF} {RNA1509_50299} {RNA1310_19871.1} {RNA815_33133}
68. MligTC455_15565 122 2.54 Mlig455_054610, Mlig455_060123

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_054610 {REF} {Length: 609} {NoTransDecoderORF} {RNA1310_55174} {RNA815_12298}

Mlig455_060123 {REF} {Length: 624} {NoTransDecoderORF} {RNA1310_55174} {RNA815_12298}
69. MligTC455_16559 61 1.26 Mlig455_050729

Neo: -

Age: -

Region-enriched R3: 4.650/0.00893

 C9orf116 0.966 - - - - 0.966 - Mlig455_050729 {REF} {Length: 952} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4490) [PF14892.8, score=113.1]} {Human: ENSG00000160345, C9orf116, chromosome 9 open reading frame 116, [RH, Score=81.3, Expect=2e-20]} {Mouse: ENSMUSG00000026831, 1700007K13Rik, RIKEN cDNA 1700007K13 gene, [RH, Score=82.4, Expect=8e-21]} {Dmel: FBgn0083943, CG34107, [RH, Score=64.7, Expect=2e-14]} {Smed: dd_Smed_v6_49903_0_1, dd_Smed_v6_49903_0_1, [RH, Score=73.2, Expect=4e-17]} {RNA1509_36646} {RNA1310_50869, RNA1509_36646} {RNA1509_36646, RNA815_31506}
70. MligTC455_29343 88 1.83 Mlig455_063181

Neo: -

Age: Down-Up-Up

 SIDT1 0.966 - - - - 0.966 - Mlig455_063181 {REF} {Length: 3188} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=382.4]} {Human: ENSG00000072858, SIDT1, SID1 transmembrane family member 1, [Score=247, Expect=9e-70]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=232, Expect=1e-64]; ENSMUSG00000034908, Sidt2, SID1 transmembrane family, member 2, [Score=228, Expect=8e-63]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [Score=209, Expect=5e-57]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [Score=242, Expect=8e-69]} {RNA1509_22787} {RNA1310_4984} {RNA815_5225}
71. MligTC455_35409 2095 43.64 Mlig455_004509

Neo: -

Age: -

 PPP3CA 0.966 - - 0.966 - - - Mlig455_004509 {REF} {Length: 4292} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=129.1]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3 catalytic subunit alpha, [RH, Score=837, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3 catalytic subunit beta, [RH, Score=823, Expect=0.0]; ENSG00000120910, PPP3CC, protein phosphatase 3 catalytic subunit gamma, [RH, Score=800, Expect=0.0]} {Mouse: ENSMUSG00000028161, Ppp3ca, protein phosphatase 3, catalytic subunit, alpha isoform, [RH, Score=840, Expect=0.0]; ENSMUSG00000021816, Ppp3cb, protein phosphatase 3, catalytic subunit, beta isoform, [RH, Score=823, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=846, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, dd_Smed_v6_2045_0_1, [RH, Score=674, Expect=0.0]} {RNA1509_25279, RNA1509_42566, RNA1509_9529} {RNA1310_10900, RNA1509_25279, RNA1509_42566, RNA1509_9529} {RNA1509_25279, RNA1509_42566, RNA1509_9529, RNA815_6996}
72. MligTC455_07322 15 0.32 Mlig455_015072

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_015072 {REF} {Length: 1524} {RNA1509_58516} {RNA1310_95465} {RNA815_5756}
73. MligTC455_12047 89 1.85 Mlig455_039632

Neo: -

Age: -

 METAP1 0.965 - - 0.965 - - - Mlig455_039632 {REF} {Length: 1921} {Pfam: Metallopeptidase family M24 [PF00557.26, score=180.8]; zf-MYND-like zinc finger, mRNA-binding [PF15801.7, score=67.1]; MYND finger [PF01753.20, score=19.0]} {Human: ENSG00000164024, METAP1, methionyl aminopeptidase 1, [RH, Score=470, Expect=1e-165]} {Mouse: ENSMUSG00000005813, Metap1, methionyl aminopeptidase 1, [RH, Score=467, Expect=2e-164]} {Dmel: FBgn0039219, CG13630, [RH, Score=485, Expect=9e-172]} {Celegans: WBGene00003129, map-1, Methionine AminoPeptidase, [RH, Score=450, Expect=4e-158]} {Smed: dd_Smed_v6_3555_0_1, dd_Smed_v6_3555_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_41540} {RNA1310_24240} {RNA815_38933}
74. MligTC455_12246 99 2.06 Mlig455_019154

Neo: -

Age: Down-Up-Down

 0.965 - - 0.965 - - - Mlig455_019154 {REF} {Length: 1143} {TRANSSPLICED} {RNA1509_36850, RNA1509_7400} {RNA1310_49234, RNA1509_36850} {RNA1509_36850, RNA815_19043.1}
75. MligTC455_20041 51 1.06 Mlig455_040193

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_040193 {REF} {Length: 2188} {NoTransDecoderORF} {RNA1509_59933} {RNA1310_67825, RNA1509_59933} {RNA1509_59933, RNA815_42094}
76. MligTC455_50499 338 7.04 Mlig455_040793, Mlig455_040848, Mlig455_064631

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.083

Region-enriched R4: 4.179/0.00047

 0.965 - - - - 0.965 -

Mlig455_040793 {REF} {Length: 1702} {NoTransDecoderORF} {RNA1509_20230} {RNA1310_46909} {RNA815_33871}

Mlig455_040848 {REF} {Length: 671} {RNA1509_20230} {RNA1310_46909} {RNA815_33871}

Mlig455_064631 {REF} {Length: 1158} {RNA1509_20230} {RNA1310_50376} {RNA815_33871}
77. MligTC455_09432 22 0.46 Mlig455_019395

Neo: -

Age: Up-Down-Up

 GRIK4 0.964 - - 0.964 - - - Mlig455_019395 {REF} {Length: 2144} {Pfam: Ligand-gated ion channel [PF00060.28, score=23.4]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=57.0, Expect=5e-09]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=57.4, Expect=2e-09]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=54.7, Expect=2e-08]} {Dmel: FBgn0039927, CG11155, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=97.1, Expect=5e-24]} {RNA1509_10728} {RNA1310_6710} {RNA815_12426}
78. MligTC455_10000 22 0.45 Mlig455_018215, Mlig455_018222, Mlig455_024893

Neo: -

Age: -

 NYNRIN 0.964 - - 0.964 - - -

Mlig455_018215 {REF} {Length: 1346} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.6]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=115, Expect=9e-28]} {RNA1509_37150} {RNA1310_27350} {RNA815_53271}

Mlig455_018222 {REF} {Length: 2972} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=48.7]; Integrase core domain [PF00665.28, score=44.0]; H2C2 zinc finger [PF09337.12, score=18.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.0, Expect=2e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.8, Expect=9e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=333, Expect=2e-98]} {RNA1509_24311} {RNA1310_27350} {RNA815_49943}

Mlig455_024893 {REF} {Length: 1453} {Smed: dd_Smed_v6_15720_0_1, dd_Smed_v6_15720_0_1, [Score=44.7, Expect=1e-06]} {RNA1310_25709} {RNA815_53271}
79. MligTC455_39938 14 0.29 Mlig455_012007

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_012007 {REF} {Length: 184} {NoTransDecoderORF} {RNA1509_49089} {RNA1310_64291}
80. MligTC455_41379 237 4.93 Mlig455_010916

Neo: -

Age: logFC(26M/2M)=-0.362

Region-enriched R2: 2.033/0.03884

 LRRC63 0.964 - - - - 0.964 - Mlig455_010916 {REF} {Length: 3357} {Pfam: Leucine rich repeat [PF13855.8, score=63.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.4]; Leucine Rich repeat [PF13516.8, score=23.2]; Leucine Rich Repeat [PF00560.35, score=22.9]} {Human: ENSG00000173988, LRRC63, leucine rich repeat containing 63, [RH, Score=197, Expect=6e-54]} {Mouse: ENSMUSG00000021997, Lrrc63, leucine rich repeat containing 63, [RH, Score=173, Expect=2e-45]} {Dmel: FBgn0038504, Sur-8, [Score=65.1, Expect=1e-10]} {Celegans: WBGene00002632, let-413, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_14985_0_1, dd_Smed_v6_14985_0_1, [Score=117, Expect=6e-28]} {RNA1509_13259} {RNA1310_13580} {RNA815_3945.1}
81. MligTC455_44011 149 3.11 Mlig455_018977

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.381

Region-enriched R4: 3.309/0.04341

 0.964 - - - - 0.964 - Mlig455_018977 {REF} {Length: 1398} {RNA1509_51989} {RNA1310_26186.1, RNA1509_51989} {RNA1509_51989, RNA815_21629}
82. MligTC455_16521 398 8.3 Mlig455_039107, Mlig455_042793

Neo: Irradiation

Age: logFC(26M/2M)=0.475

 AASS 0.963 - - - - 0.963 -

Mlig455_039107 {REF} {Length: 3630} {Pfam: Saccharopine dehydrogenase C-terminal domain [PF16653.7, score=260.3]; Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=96.4]; Saccharopine dehydrogenase NADP binding domain [PF03435.20, score=66.7]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=34.3]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [RH, Score=966, Expect=0.0]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [RH, Score=1025, Expect=0.0]} {Celegans: WBGene00019819, R02D3.1, [RH, Score=953, Expect=0.0]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [RH, Score=1134, Expect=0.0]} {RNA1509_22582} {RNA1310_3292.1} {RNA815_810.1}

Mlig455_042793 {REF} {Length: 3691} {Pfam: Saccharopine dehydrogenase C-terminal domain [PF16653.7, score=260.3]; Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=97.3]; Saccharopine dehydrogenase NADP binding domain [PF03435.20, score=66.8]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=34.3]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [RH, Score=965, Expect=0.0]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [RH, Score=1025, Expect=0.0]} {Celegans: WBGene00019819, R02D3.1, [RH, Score=954, Expect=0.0]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [RH, Score=1134, Expect=0.0]} {RNA1509_22582} {RNA1310_3292.1, RNA1509_22582} {RNA1509_22582, RNA815_810.1}
83. MligTC455_36126 12 0.25 Mlig455_065186

Neo: Int S/G2/M

Age: -

 0.963 - - - - 0.963 - Mlig455_065186 {REF} {Length: 2183} {NoTransDecoderORF} {RNA1509_49895} {RNA1310_96476} {RNA815_54202}
84. MligTC455_38461 183 3.81 Mlig455_013666

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=0.606

 0.962 - - - - 0.962 - Mlig455_013666 {REF} {Length: 1545} {Pfam: Glycine rich protein [PF12810.9, score=29.9]} {RNA1509_28715} {RNA1310_39036} {RNA815_34674}
85. MligTC455_38809 89 1.85 Mlig455_010159, Mlig455_018689, Mlig455_018690, Mlig455_040237, Mlig455_051161, Mlig455_055776, Mlig455_058202, Mlig455_068783

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.196

 0.962 - - - - 0.962 -

Mlig455_010159 {REF} {Length: 4808} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.5]; Integrase core domain [PF00665.28, score=45.9]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_018689 {REF} {Length: 383} {Pfam: Zinc knuckle [PF00098.25, score=35.4]} {RNA1509_37828} {RNA1310_12941} {RNA815_12994}

Mlig455_018690 {REF} {Length: 824} {Pfam: Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=28.1]; H2C2 zinc finger [PF09337.12, score=19.0]} {RNA1509_37828} {RNA1310_20398} {RNA815_3168.1}

Mlig455_040237 {REF} {Length: 407} {Pfam: Integrase core domain [PF00665.28, score=27.8]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_051161 {REF} {Length: 2606} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=81.6]; Integrase zinc binding domain [PF17921.3, score=64.8]; Integrase core domain [PF00665.28, score=48.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=5e-27]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}

Mlig455_055776 {REF} {Length: 4218} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.5]; Integrase core domain [PF00665.28, score=49.2]} {RNA1509_12358} {RNA1310_2289, RNA1509_12358} {RNA1509_12358, RNA815_3168.1}

Mlig455_058202 {REF} {Length: 1723} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.0]; Aspartyl protease [PF13650.8, score=31.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Zinc knuckle [PF00098.25, score=27.2]; Aspartyl protease [PF09668.12, score=20.1]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=101, Expect=3e-22]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}

Mlig455_068783 {REF} {Length: 3243} {Pfam: Aspartyl protease [PF13650.8, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF09668.12, score=23.3]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}
86. MligTC455_49670 33 0.68 Mlig455_047674

Neo: Int S/G2/M

Age: -

Region-enriched R2: 4.520/0.04813
Region-enriched R4: 3.300/0.03683

 WSCD2 0.962 - - - - 0.962 - Mlig455_047674 {REF} {Length: 875} {Pfam: WSC domain [PF01822.21, score=55.1]; PAN domain [PF00024.28, score=19.2]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.1, Expect=9e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=52.8, Expect=9e-08]} {RNA1509_29094} {RNA1310_84271.1} {RNA815_51632}
87. MligTC455_09339 17 0.36 Mlig455_033406

Neo: -

Age: Down-Up-Down

 0.961 - - 0.961 - - - Mlig455_033406 {REF} {Length: 1014} {RNA1509_14363} {RNA1310_45524.1} {RNA815_21772}
88. MligTC455_28596 52 1.08 Mlig455_039629

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_039629 {REF} {Length: 1244} {Pfam: Integrase core domain [PF00665.28, score=31.2]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
89. MligTC455_25403 79 1.66 Mlig455_036259, Mlig455_040819

Neo: -

Age: Up-Down-Up

 GVQW3 0.96 - - - - 0.960 -

Mlig455_036259 {REF} {Length: 1703} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=38.6]; Homeodomain-like domain [PF13565.8, score=30.1]; HTH domain in Mos1 transposase [PF17906.3, score=25.3]; Winged helix-turn helix [PF13551.8, score=18.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=56.2, Expect=1e-08]} {RNA1509_55432} {RNA1310_7362.1} {RNA815_6705.1}

Mlig455_040819 {REF} {Length: 1465} {Pfam: Putative DNA-binding domain [PF04326.16, score=33.6]} {RNA1509_47755} {RNA1310_37975} {RNA815_40947}
90. MligTC455_51254 45 0.94 Mlig455_062218

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_062218 {REF} {Length: 1157} {NoTransDecoderORF}
91. MligTC455_30722 33 0.69 Mlig455_041192

Neo: -

Age: logFC(26M/2M)=1.757

 0.959 - - - - 0.959 - Mlig455_041192 {REF} {Length: 1796} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_40809} {RNA1310_246.1} {RNA815_33502.1}
92. MligTC455_00792 11 0.23 Mlig455_047413, Mlig455_071007

Neo: -

Age: Down-Down-Up

 0.958 - - - - 0.958 -

Mlig455_047413 {REF} {Length: 551} {NoTransDecoderORF} {RNA1310_57332} {RNA815_50731}

Mlig455_071007 {REF} {Length: 993} {NoTransDecoderORF} {RNA1509_59554} {RNA1310_57332} {RNA815_50731}
93. MligTC455_47776 17 0.35 Mlig455_034068

Neo: -

Age: -

 CHRNA9 0.958 - - - - 0.958 - Mlig455_034068 {REF} {Length: 1878} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=139.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=90.5]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=206, Expect=3e-60]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=3e-59]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=3e-59]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=203, Expect=4e-59]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=201, Expect=2e-58]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=200, Expect=2e-58]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=196, Expect=2e-56]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=208, Expect=3e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=207, Expect=6e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=204, Expect=2e-59]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=201, Expect=4e-59]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=216, Expect=1e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=211, Expect=2e-62]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=211, Expect=2e-62]} {RNA1310_14388.1} {RNA815_21155}
94. MligTC455_48298 55 1.14 Mlig455_067985

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_067985 {REF} {Length: 1658} {TRANSSPLICED} {Pfam: Centrosomin N-terminal motif 1 [PF07989.13, score=19.1]} {RNA1509_50908} {RNA1310_7799.1} {RNA815_38707}
95. MligTC455_11439 36 0.76 Mlig455_030893

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_030893 {REF} {Length: 845} {RNA1509_54643} {RNA1310_17365} {RNA815_7880}
96. MligTC455_11854 112 2.32 Mlig455_057286

Neo: Irradiation

Age: -

Region-specific R4: 6.358

Region-enriched R4: 5.060/0.00000

 0.957 - - - - 0.957 - Mlig455_057286 {REF} {Length: 793} {RNA1509_33398} {RNA1310_24396.1} {RNA815_21615}
97. MligTC455_18498 16 0.33 Mlig455_013509

Neo: -

Age: -

Regeneration-upregulated R2: 5.226

Regeneration-enriched R2: 5.226

 0.957 - - - - 0.957 - Mlig455_013509 {REF} {Length: 630} {NoTransDecoderORF}
98. MligTC455_45876 77 1.59 Mlig455_017599, Mlig455_058883

Neo: -

Age: -

 0.957 - - 0.957 - - -

Mlig455_017599 {REF} {Length: 3586} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=27.3]} {Celegans: WBGene00019444, frpr-11, FMRFamide Peptide Receptor family, [Score=63.5, Expect=4e-11]} {RNA1310_90357}

Mlig455_058883 {REF} {Length: 2226} {RNA1310_90357}
99. MligTC455_14697 10 0.21 Mlig455_045505

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_045505 {REF} {Length: 658} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=27.6]} {RNA1509_45868} {RNA1310_53876} {RNA815_13104.1}
100. MligTC455_04350 39 0.81 Mlig455_022241, Mlig455_022256

Neo: Int S/G2/M

Age: -

 0.955 - - - - 0.955 -

Mlig455_022241 {REF} {Length: 1344} {RNA1310_30772} {RNA815_51908}

Mlig455_022256 {REF} {Length: 1534} {RNA1509_40855} {RNA1310_30772} {RNA815_51908}

There are 16 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA