M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_11554

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11554 55 1.14 Mlig455_031584

Neo: -

Age: Up-Down-Down

 ZNFX1 Mlig455_031584 {REF} {Length: 7786} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=115.5]; AAA domain [PF13087.8, score=111.0]; AAA domain [PF13086.8, score=78.9]; AAA domain [PF13245.8, score=31.6]; AAA domain [PF13604.8, score=23.8]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=299, Expect=6e-81]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=297, Expect=2e-80]} {Dmel: FBgn0039165, CG6204, [Score=149, Expect=1e-35]} {Celegans: WBGene00014208, ZK1067.2, [Score=251, Expect=2e-66]} {Smed: dd_Smed_v6_10024_0_1, dd_Smed_v6_10024_0_1, [Score=352, Expect=2e-99]} {RNA1509_11861} {RNA1310_418} {RNA815_9954}

Cumulative graph for MligTC455_11554

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.28 1.269 1.00000 1.00000
RegionR2 3.637 1.269 0.09802 0.38479
RegionR3 2.788 1.269 0.14677 0.65141
RegionR4 -2.575 1.269 0.99930 1.00000
RegionR5 -0.179 1.269 0.91019 1.00000
RegionR6 1.484 1.269 0.43981 0.99965
RegionR7 2.509 1.269 0.19348 0.79872
RegionR8 -1.384 1.269 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.281 1.269 0.99976 1.00000
RegenerationR2 3.306 1.269 0.07498 0.44252
RegenerationR3 1.195 1.269 0.35653 0.77391
RegenerationR4 4.364 1.269 0.06939 0.41922
RegenerationR5 1.892 1.269 0.26990 0.70154
RegenerationR6 1.053 1.269 0.49997 0.80620
RegenerationBL 4.638 1.269 0.06146 0.28793
RegenerationTP 3.16 1.269 0.23870 0.68447


Genes with expression patterns similar to MligTC455_11554

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11554 55 1.14 Mlig455_031584

Neo: -

Age: Up-Down-Down

 ZNFX1 4 1.000 1.000 - - 1.000 1.000 Mlig455_031584 {REF} {Length: 7786} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=115.5]; AAA domain [PF13087.8, score=111.0]; AAA domain [PF13086.8, score=78.9]; AAA domain [PF13245.8, score=31.6]; AAA domain [PF13604.8, score=23.8]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=299, Expect=6e-81]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=297, Expect=2e-80]} {Dmel: FBgn0039165, CG6204, [Score=149, Expect=1e-35]} {Celegans: WBGene00014208, ZK1067.2, [Score=251, Expect=2e-66]} {Smed: dd_Smed_v6_10024_0_1, dd_Smed_v6_10024_0_1, [Score=352, Expect=2e-99]} {RNA1509_11861} {RNA1310_418} {RNA815_9954}
2. MligTC455_37585 138 2.88 Mlig455_050977

Neo: -

Age: logFC(26M/2M)=-0.353

 MFSD10 1.695 - - - - 0.709 0.986 Mlig455_050977 {REF} {Length: 3495} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=113.8]; MFS_1 like family [PF12832.9, score=36.9]; Sugar (and other) transporter [PF00083.26, score=30.5]} {Human: ENSG00000109736, MFSD10, major facilitator superfamily domain containing 10, [Score=55.1, Expect=1e-07]} {Mouse: ENSMUSG00000001082, Mfsd10, major facilitator superfamily domain containing 10, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00017339, F10D7.2, [Score=59.3, Expect=4e-09]} {RNA1509_36151} {RNA1310_15615} {RNA815_31475}
3. MligTC455_09828 80 1.67 Mlig455_052764

Neo: -

Age: -

 0.991 - - - - - 0.991 Mlig455_052764 {REF} {Length: 1206} {NoTransDecoderORF} {RNA1310_17510.1} {RNA815_9674}
4. MligTC455_20467 106 2.2 Mlig455_024422

Neo: -

Age: Up-Down-Down

 POU4F2 0.987 - - - - - 0.987 Mlig455_024422 {REF} {Length: 2685} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.5]; Homeodomain [PF00046.31, score=67.5]} {Human: ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=271, Expect=3e-85]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=1e-84]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=265, Expect=1e-83]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=3e-85]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=270, Expect=9e-85]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=265, Expect=7e-84]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=241, Expect=1e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=310, Expect=3e-101]} {RNA1509_57422} {RNA1310_14116} {RNA815_35899}
5. MligTC455_26133 26 0.55 Mlig455_009358

Neo: -

Age: -

 0.986 - - - - - 0.986 Mlig455_009358 {REF} {Length: 2096} {RNA1509_41127} {RNA1310_57948} {RNA815_26816}
6. MligTC455_43453 55 1.14 Mlig455_067444, Mlig455_069599

Neo: -

Age: -

 0.986 - - - - - 0.986

Mlig455_067444 {REF} {Length: 353} {NoTransDecoderORF} {RNA1509_8113} {RNA1310_2282.2} {RNA815_22369}

Mlig455_069599 {REF} {Length: 380} {NoTransDecoderORF} {RNA1509_8113} {RNA1310_2282.2} {RNA815_22369}
7. MligTC455_57023 35 0.72 Mlig455_025177

Neo: -

Age: -

 0.982 - - - - - 0.982 Mlig455_025177 {REF} {Length: 323} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_99479.1} {RNA815_29511.2}
8. MligTC455_06227 228 4.75 Mlig455_036666, Mlig455_036679

Neo: -

Age: -

 0.981 - - - - - 0.981

Mlig455_036666 {REF} {Length: 780} {RNA1310_112949}

Mlig455_036679 {REF} {Length: 4100} {RNA1310_79588}
9. MligTC455_04989 15 0.3 Mlig455_045074

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_045074 {REF} {Length: 957} {NoTransDecoderORF} {RNA1310_63445.1}
10. MligTC455_21435 37 0.77 Mlig455_016499

Neo: -

Age: -

 RTL1 0.979 - - - - - 0.979 Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816}
11. MligTC455_17960 44 0.92 Mlig455_021047

Neo: -

Age: -

Region-enriched R2: 4.515/0.04131
Region-enriched R4: 3.266/0.03072

 0.977 - - - - - 0.977 Mlig455_021047 {REF} {Length: 2114} {Pfam: SH3 domain [PF17902.3, score=25.9]; Plectin repeat [PF00681.22, score=23.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_53557} {RNA1310_11354} {RNA815_18566}
12. MligTC455_31840 149 3.11 Mlig455_015884

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_015884 {REF} {Length: 3104} {RNA1509_19124} {RNA1310_1002.1} {RNA815_889}
13. MligTC455_38108 59 1.23 Mlig455_029176, Mlig455_030240

Neo: -

Age: -

 GABRR2 0.973 - - - - - 0.973

Mlig455_029176 {REF} {Length: 1196} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=83.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=65.2]} {Human: ENSG00000111886, GABRR2, gamma-aminobutyric acid type A receptor rho2 subunit, [Score=152, Expect=1e-40]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=150, Expect=5e-40]} {Mouse: ENSMUSG00000023267, Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2, [Score=148, Expect=2e-39]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=147, Expect=4e-39]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=145, Expect=2e-38]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=145, Expect=1e-38]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=143, Expect=9e-38]; ENSMUSG00000028280, Gabrr1, gamma-aminobutyric acid (GABA) C receptor, subunit rho 1, [Score=142, Expect=3e-37]} {Dmel: FBgn0024963, GluClalpha, [Score=144, Expect=3e-38]} {Celegans: WBGene00001592, glc-2, Glutamate-gated chloride channel subunit beta, [Score=156, Expect=4e-43]} {Smed: dd_Smed_v6_14811_0_1, dd_Smed_v6_14811_0_1, [Score=186, Expect=2e-54]} {RNA1310_127675}

Mlig455_030240 {REF} {Length: 2005} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=83.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=65.2]} {Human: ENSG00000111886, GABRR2, gamma-aminobutyric acid type A receptor rho2 subunit, [Score=152, Expect=1e-40]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=150, Expect=5e-40]} {Mouse: ENSMUSG00000023267, Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2, [Score=148, Expect=2e-39]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=147, Expect=4e-39]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=145, Expect=2e-38]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=145, Expect=1e-38]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=143, Expect=9e-38]; ENSMUSG00000028280, Gabrr1, gamma-aminobutyric acid (GABA) C receptor, subunit rho 1, [Score=142, Expect=3e-37]} {Dmel: FBgn0024963, GluClalpha, [Score=144, Expect=3e-38]} {Celegans: WBGene00001592, glc-2, Glutamate-gated chloride channel subunit beta, [Score=156, Expect=4e-43]} {Smed: dd_Smed_v6_14811_0_1, dd_Smed_v6_14811_0_1, [Score=186, Expect=2e-54]} {RNA1310_127675} {RNA815_24496}
14. MligTC455_48560 57 1.18 Mlig455_046453

Neo: -

Age: -

Region-enriched R2: 5.673/0.03292

 0.973 - - - - - 0.973 Mlig455_046453 {REF} {Length: 1321} {TRANSSPLICED} {RNA1310_43065} {RNA815_11099}
15. MligTC455_39981 457 9.52 Mlig455_028079

Neo: Int S/G2/M

Age: -

 MRPL17 0.972 - - - - - 0.972 Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956}
16. MligTC455_17936 83 1.72 Mlig455_015624

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_015624 {REF} {Length: 700} {RNA1509_39987} {RNA1310_11976} {RNA815_1768.1}
17. MligTC455_28714 174 3.62 Mlig455_022371, Mlig455_027621

Neo: -

Age: -

 0.968 - - - - - 0.968

Mlig455_022371 {REF} {Length: 654} {Pfam: PAN domain [PF00024.28, score=23.7]} {RNA1310_35396.3} {RNA815_64813}

Mlig455_027621 {REF} {Length: 3080} {Pfam: WSC domain [PF01822.21, score=50.0]; PAN domain [PF00024.28, score=30.3]} {RNA1509_18097} {RNA1310_13811.1} {RNA815_2868}
18. MligTC455_41883 85 1.77 Mlig455_012612

Neo: -

Age: -

 ANKRD50 0.968 - - - - - 0.968 Mlig455_012612 {REF} {Length: 7141} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.8]; Ankyrin repeats (many copies) [PF13637.8, score=63.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.8]; Ankyrin repeat [PF13606.8, score=46.8]; Mab-21 protein [PF03281.16, score=41.3]; Ankyrin repeat [PF00023.32, score=37.7]; Helix-turn-helix domain [PF13560.8, score=18.9]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=86.3, Expect=2e-16]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=83.6, Expect=1e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=87.4, Expect=6e-17]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=91.7, Expect=2e-18]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=64.7, Expect=3e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=89.7, Expect=5e-18]} {RNA1509_27676, RNA1509_27730} {RNA1310_22442, RNA1509_27676} {RNA1509_27676, RNA815_2426.1}
19. MligTC455_19193 147 3.07 Mlig455_007213

Neo: -

Age: -

 BFAR 0.967 - - - - - 0.967 Mlig455_007213 {REF} {Length: 2792} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=29.7]; RING-type zinc-finger [PF13445.8, score=29.4]; Ring finger domain [PF13639.8, score=27.0]; zinc-RING finger domain [PF14634.8, score=25.5]; Prokaryotic RING finger family 4 [PF14447.8, score=22.2]; RING-H2 zinc finger domain [PF12678.9, score=19.9]} {Human: ENSG00000275618, BFAR, bifunctional apoptosis regulator, [RH, Score=49.3, Expect=7e-07]; ENSG00000103429, BFAR, bifunctional apoptosis regulator, [RH, Score=49.3, Expect=7e-07]} {Mouse: ENSMUSG00000022684, Bfar, bifunctional apoptosis regulator, [RH, Score=52.8, Expect=1e-08]; ENSMUSG00000057596, Trim30d, tripartite motif-containing 30D, [RH, Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_10019_0_1, dd_Smed_v6_10019_0_1, [Score=46.2, Expect=2e-06]} {RNA1509_42543, RNA1509_53684} {RNA1310_39360, RNA1509_42543} {RNA1509_42543, RNA815_20181}
20. MligTC455_24426 260 5.41 Mlig455_001476, Mlig455_006840, Mlig455_006902, Mlig455_055103, Mlig455_055149

Neo: Germline

Age: logFC(26M/2M)=0.491

Region-specific R4: 7.022

Region-enriched R4: 8.137/0.00000

 0.967 - - - - 0.967 -

Mlig455_001476 {REF} {Length: 1393} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_39896.2} {RNA815_33608}

Mlig455_006840 {REF} {Length: 1356} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_44250} {RNA815_33608}

Mlig455_006902 {REF} {Length: 723} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_37253} {RNA815_16973}

Mlig455_055103 {REF} {Length: 2635} {Pfam: Winged helix-turn helix [PF13551.8, score=31.5]; DDE superfamily endonuclease [PF13358.8, score=29.2]; Homeodomain-like domain [PF13384.8, score=27.2]; Helix-turn-helix domain [PF13518.8, score=26.7]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.5]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=63.9, Expect=3e-12]} {RNA1509_42119} {RNA1310_44250} {RNA815_33608}

Mlig455_055149 {REF} {Length: 1470} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_44250} {RNA815_16973}
21. MligTC455_53085 17 0.35 Mlig455_029205

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_029205 {REF} {Length: 1708} {Smed: dd_Smed_v6_17025_0_1, dd_Smed_v6_17025_0_1, [Score=47.8, Expect=1e-06]} {RNA1310_43786} {RNA815_38809}
22. MligTC455_25629 246 5.13 Mlig455_038787, Mlig455_038796

Neo: -

Age: -

 MTOR 0.965 - - - - - 0.965

Mlig455_038787 {REF} {Length: 9062} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=230.1]; FAT domain [PF02259.25, score=204.1]; Domain of unknown function (DUF3385) [PF11865.10, score=133.7]; FKBP12-rapamycin binding domain [PF08771.13, score=116.2]; FATC domain [PF02260.22, score=49.6]; HEAT repeats [PF13646.8, score=49.5]; HEAT-like repeat [PF13513.8, score=38.0]; HEAT repeat [PF02985.24, score=36.1]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=26.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.1]} {Human: ENSG00000198793, MTOR, mechanistic target of rapamycin kinase, [RH, Score=1802, Expect=0.0]} {Mouse: ENSMUSG00000028991, Mtor, mechanistic target of rapamycin kinase, [RH, Score=1804, Expect=0.0]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [RH, Score=1622, Expect=0.0]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [RH, Score=553, Expect=5e-159]} {Smed: dd_Smed_v6_3921_0_1, dd_Smed_v6_3921_0_1, [RH, Score=831, Expect=0.0]} {RNA1509_2274, RNA1509_44760} {RNA1310_158.1, RNA1509_2274, RNA1509_44760} {RNA1509_2274, RNA1509_44760, RNA815_132}

Mlig455_038796 {REF} {Length: 8981} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=230.1]; FAT domain [PF02259.25, score=204.0]; Domain of unknown function (DUF3385) [PF11865.10, score=133.0]; FKBP12-rapamycin binding domain [PF08771.13, score=116.4]; FATC domain [PF02260.22, score=49.6]; HEAT repeats [PF13646.8, score=49.5]; HEAT-like repeat [PF13513.8, score=37.6]; HEAT repeat [PF02985.24, score=36.1]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=25.5]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.1]} {Human: ENSG00000198793, MTOR, mechanistic target of rapamycin kinase, [RH, Score=1805, Expect=0.0]} {Mouse: ENSMUSG00000028991, Mtor, mechanistic target of rapamycin kinase, [RH, Score=1806, Expect=0.0]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [RH, Score=1619, Expect=0.0]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [RH, Score=553, Expect=5e-159]} {Smed: dd_Smed_v6_3921_0_1, dd_Smed_v6_3921_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_2274, RNA1509_38439} {RNA1310_158.1, RNA1509_38439} {RNA1509_38439, RNA815_132}
23. MligTC455_44045 161 3.36 Mlig455_064189

Neo: -

Age: -

 CCDC17 0.965 - - - - - 0.965 Mlig455_064189 {REF} {Length: 4760} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=8e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=491, Expect=2e-150]} {RNA1509_21725, RNA1509_31781} {RNA1310_2813.2, RNA1509_21725} {RNA1509_21725, RNA815_3640}
24. MligTC455_36660 82 1.72 Mlig455_013558

Neo: -

Age: -

 TUBGCP4 0.962 - - - - - 0.962 Mlig455_013558 {REF} {Length: 2841} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=173.9]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=2e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=5e-106]} {RNA1509_20258} {RNA1310_6475, RNA1509_20258} {RNA1509_20258, RNA815_4392}
25. MligTC455_47235 232 4.84 Mlig455_011474

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.498

 UBASH3B 0.962 - - - - - 0.962 Mlig455_011474 {REF} {Length: 5904} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=51.3]} {Human: ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [RH, Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [RH, Score=169, Expect=5e-44]} {Dmel: FBgn0039137, CG13604, [RH, Score=120, Expect=5e-28]} {Celegans: WBGene00020321, T07F12.1, [RH, Score=116, Expect=1e-28]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [RH, Score=162, Expect=4e-42]} {RNA1509_10245, RNA1509_37049} {RNA1310_4087.1, RNA1509_10245, RNA1509_37049} {RNA1509_10245, RNA1509_37049, RNA815_2334.1}
26. MligTC455_29693 81 1.69 Mlig455_032201, Mlig455_036011, Mlig455_054134

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.250

 ANKRD50 0.96 - - - - - 0.960

Mlig455_032201 {REF} {Length: 3871} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=42.5]; Mab-21 protein [PF03281.16, score=40.7]; Ankyrin repeats (many copies) [PF13637.8, score=40.2]; Ankyrin repeats (many copies) [PF13857.8, score=39.0]; Ankyrin repeat [PF13606.8, score=34.3]; Ankyrin repeat [PF00023.32, score=30.5]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=65.9, Expect=2e-10]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.9, Expect=9e-10]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=66.6, Expect=8e-11]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=60.8, Expect=3e-09]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_12936_0_1, dd_Smed_v6_12936_0_1, [Score=60.1, Expect=4e-09]} {RNA1509_27730} {RNA1310_21755.1} {RNA815_2426.1}

Mlig455_036011 {REF} {Length: 1929} {Pfam: Mab-21 protein [PF03281.16, score=39.7]} {RNA1509_27730} {RNA1310_4721} {RNA815_5358.1}

Mlig455_054134 {REF} {Length: 2699} {RNA1509_26281} {RNA1310_31514} {RNA815_5358.1}
27. MligTC455_19216 82 1.71 Mlig455_038007

Neo: Int S/G2/M

Age: -

 0.959 - - - - - 0.959 Mlig455_038007 {REF} {Length: 2594} {TRANSSPLICED} {RNA1509_48249} {RNA1310_31830} {RNA815_49860}
28. MligTC455_34359 93 1.94 Mlig455_011726

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_011726 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: CUB domain [PF00431.22, score=27.1]} {RNA1509_23090} {RNA1310_8182} {RNA815_1199.1}
29. MligTC455_45410 457 9.52 Mlig455_021310

Neo: Int S/G2/M

Age: Up-Down-Down

 ADSS 0.959 - - - - - 0.959 Mlig455_021310 {REF} {Length: 5161} {TRANSSPLICED} {Pfam: Adenylosuccinate synthetase [PF00709.23, score=566.8]} {Human: ENSG00000035687, ADSS, adenylosuccinate synthase, [RH, Score=503, Expect=2e-176]; ENSG00000185100, ADSSL1, adenylosuccinate synthase like 1, [RH, Score=494, Expect=4e-173]} {Mouse: ENSMUSG00000015961, Adss, adenylosuccinate synthetase, non muscle, [RH, Score=504, Expect=2e-177]; ENSMUSG00000011148, Adssl1, adenylosuccinate synthetase like 1, [RH, Score=498, Expect=1e-174]} {Dmel: FBgn0027493, AdSS, Adenylosuccinate Synthetase, [RH, Score=470, Expect=5e-164]} {Celegans: WBGene00016509, adss-1, Adenylosuccinate synthetase, [RH, Score=431, Expect=8e-149]} {Smed: dd_Smed_v6_2154_0_1, dd_Smed_v6_2154_0_1, [RH, Score=504, Expect=9e-178]} {RNA1509_22607, RNA1509_31750, RNA1509_8269} {RNA1310_16344, RNA1509_22607, RNA1509_31750, RNA1509_8269} {RNA1509_22607, RNA1509_31750, RNA1509_8269, RNA815_7491}
30. MligTC455_45564 117 2.43 Mlig455_006872

Neo: -

Age: logFC(26M/2M)=-2.025

Region-enriched R6: 3.967/0.00318

 ARF3 0.959 - - - - - 0.959 Mlig455_006872 {REF} {Length: 1935} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939, RNA1509_57358} {RNA1509_57358, RNA815_20725}
31. MligTC455_51835 161 3.36 Mlig455_008701, Mlig455_033989

Neo: -

Age: Down-Up-Up

 BORCS5 0.959 - - - - - 0.959

Mlig455_008701 {REF} {Length: 1050} {TRANSSPLICED} {Pfam: Tumour suppressor protein [PF10158.11, score=82.0]} {Human: ENSG00000165714, BORCS5, BLOC-1 related complex subunit 5, [Score=97.8, Expect=1e-24]; ENSG00000280689, BORCS5, BLOC-1 related complex subunit 5, [Score=97.8, Expect=1e-24]} {Mouse: ENSMUSG00000042992, Borcs5, BLOC-1 related complex subunit 5, [Score=98.6, Expect=8e-25]} {Smed: dd_Smed_v6_6520_0_1, dd_Smed_v6_6520_0_1, [Score=89.4, Expect=3e-21]} {RNA1509_29941} {RNA1310_29876.1} {RNA815_8571.1}

Mlig455_033989 {REF} {Length: 2555} {TRANSSPLICED} {Pfam: Tumour suppressor protein [PF10158.11, score=100.0]} {Human: ENSG00000280689, BORCS5, BLOC-1 related complex subunit 5, [RH, Score=124, Expect=3e-34]; ENSG00000165714, BORCS5, BLOC-1 related complex subunit 5, [RH, Score=124, Expect=3e-34]} {Mouse: ENSMUSG00000042992, Borcs5, BLOC-1 related complex subunit 5, [RH, Score=124, Expect=2e-34]} {Celegans: WBGene00019126, sam-4, [Score=46.6, Expect=5e-06]} {Smed: dd_Smed_v6_6520_0_1, dd_Smed_v6_6520_0_1, [RH, Score=124, Expect=3e-34]} {RNA1509_29941} {RNA1310_29876.1, RNA1509_29941} {RNA1509_29941, RNA815_8571.1}
32. MligTC455_26491 122 2.54 Mlig455_021531

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.298

Region-specific R4: 6.258

Region-enriched R4: 2.881/0.04579

 0.958 - - - - 0.958 - Mlig455_021531 {REF} {Length: 2216} {RNA1509_14837, RNA1509_36560, RNA1509_55869} {RNA1310_13909, RNA1509_36560, RNA1509_55869} {RNA1509_36560, RNA1509_55869, RNA815_4807}
33. MligTC455_36661 127 2.66 Mlig455_013611

Neo: -

Age: -

 TUBGCP4 0.958 - - - - - 0.958 Mlig455_013611 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=175.2]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=3e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=6e-106]} {RNA1509_20258, RNA1509_45019} {RNA1310_6475, RNA1509_45019} {RNA1509_45019, RNA815_4392}
34. MligTC455_38358 55 1.16 Mlig455_052999

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_052999 {REF} {Length: 1892} {RNA1509_42586} {RNA1310_61726} {RNA815_15862}
35. MligTC455_52851 150 3.12 Mlig455_019167

Neo: -

Age: -

 IPP 0.958 - - - - - 0.958 Mlig455_019167 {REF} {Length: 4194} {Pfam: Kelch motif [PF13964.8, score=59.7]; BTB/POZ domain [PF00651.33, score=59.3]; Kelch motif [PF01344.27, score=43.5]; PB1 domain [PF00564.26, score=38.1]; BTB And C-terminal Kelch [PF07707.17, score=31.3]; Kelch motif [PF13854.8, score=29.1]; Galactose oxidase, central domain [PF13418.8, score=21.0]} {Human: ENSG00000197429, IPP, intracisternal A particle-promoted polypeptide, [Score=108, Expect=1e-23]} {Mouse: ENSMUSG00000028696, Ipp, IAP promoted placental gene, [Score=116, Expect=2e-26]} {Dmel: FBgn0034396, CG15097, [Score=101, Expect=1e-21]} {Celegans: WBGene00002184, kel-1, KELch-repeat containing protein; Kel-1 protein, [Score=94.0, Expect=2e-19]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=112, Expect=2e-25]} {RNA1509_34974} {RNA1310_11834, RNA1509_34974} {RNA1509_34974, RNA815_22708}
36. MligTC455_16660 27 0.55 Mlig455_056328

Neo: -

Age: -

 CENPA 0.957 - - - - - 0.957 Mlig455_056328 {REF} {Length: 2270} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.8]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=73.2, Expect=4e-15]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469, RNA1509_27366} {RNA1509_27366, RNA815_14172}
37. MligTC455_28595 113 2.35 Mlig455_025485, Mlig455_057449

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_025485 {REF} {Length: 1322} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17062} {RNA815_22796.1}

Mlig455_057449 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}
38. MligTC455_00977 36 0.74 Mlig455_030564

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_030564 {REF} {Length: 420}
39. MligTC455_02060 78 1.63 Mlig455_009570

Neo: -

Age: logFC(26M/2M)=-0.292

 PCM1 0.954 - - - - - 0.954 Mlig455_009570 {REF} {Length: 2628} {Pfam: Pericentriolar material 1 C terminus [PF15717.7, score=22.3]} {Human: ENSG00000078674, PCM1, pericentriolar material 1, [Score=51.6, Expect=3e-06]} {Mouse: ENSMUSG00000031592, Pcm1, pericentriolar material 1, [Score=51.2, Expect=2e-06]} {RNA1509_46460} {RNA1310_12986} {RNA815_6776}
40. MligTC455_28304 360 7.5 Mlig455_039819, Mlig455_067988

Neo: Germline

Age: Down-Down-Down

Region-specific R4: 5.355

Region-enriched R4: 3.130/0.00049

 0.954 - - - - 0.954 -

Mlig455_039819 {REF} {Length: 642} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51681} {RNA1310_928.1} {RNA815_529.1}

Mlig455_067988 {REF} {Length: 5022} {RNA1509_51631, RNA1509_51681} {RNA1310_928.1, RNA1509_51631, RNA1509_51681} {RNA1509_51631, RNA1509_51681, RNA815_529.1}
41. MligTC455_36212 118 2.46 Mlig455_000072, Mlig455_049028

Neo: -

Age: Up-Down-Down

 0.954 - - - - - 0.954

Mlig455_000072 {REF} {Length: 2472} {RNA1509_44312, RNA1509_55442} {RNA1310_56084.1, RNA1509_44312, RNA1509_55442} {RNA1509_44312, RNA1509_55442, RNA815_65000}

Mlig455_049028 {REF} {Length: 782} {NoTransDecoderORF} {RNA1509_44312} {RNA1310_69582}
42. MligTC455_53002 52 1.08 Mlig455_058925

Neo: -

Age: logFC(26M/2M)=-1.041

 0.954 - - - - - 0.954 Mlig455_058925 {REF} {Length: 2661} {Pfam: Otopetrin [PF03189.15, score=23.9]} {RNA1509_54233} {RNA1310_9118} {RNA815_5019.1}
43. MligTC455_27098 364 7.58 Mlig455_038070

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=1.628

 SAA1 0.953 - - - - - 0.953 Mlig455_038070 {REF} {Length: 2774} {Pfam: Serum amyloid A protein [PF00277.20, score=66.0]} {Human: ENSG00000173432, SAA1, serum amyloid A1, [RH, Score=53.9, Expect=2e-09]; ENSG00000134339, SAA2, serum amyloid A2, [RH, Score=53.1, Expect=4e-09]} {Mouse: ENSMUSG00000040026, Saa3, serum amyloid A 3, [RH, Score=61.2, Expect=2e-12]; ENSMUSG00000074115, Saa1, serum amyloid A 1, [RH, Score=60.1, Expect=6e-12]; ENSMUSG00000057465, Saa2, serum amyloid A 2, [RH, Score=59.7, Expect=4e-12]} {RNA1509_11884, RNA1509_32696, RNA1509_34673} {RNA1310_25670.1, RNA1509_32696, RNA1509_34673} {RNA1509_32696, RNA1509_34673, RNA815_10405}
44. MligTC455_27818 450 9.38 Mlig455_026648

Neo: -

Age: Down-Up-Down

Region-enriched R4: 2.715/0.00462

 0.953 - - - - - 0.953 Mlig455_026648 {REF} {Length: 6363} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=19.9]} {RNA1509_28802} {RNA1310_11963} {RNA815_29511.1}
45. MligTC455_28630 190 3.95 Mlig455_062402

Neo: -

Age: logFC(26M/2M)=0.419

 COG1 0.953 - - - - - 0.953 Mlig455_062402 {REF} {Length: 3965} {TRANSSPLICED} {Pfam: Vps51/Vps67 [PF08700.13, score=50.7]} {Human: ENSG00000166685, COG1, component of oligomeric golgi complex 1, [RH, Score=185, Expect=1e-47]} {Mouse: ENSMUSG00000018661, Cog1, component of oligomeric golgi complex 1, [RH, Score=186, Expect=7e-48]} {Dmel: FBgn0037998, Cog1, Component of oligomeric golgi complex 1, [RH, Score=83.2, Expect=6e-16]} {Smed: dd_Smed_v6_5278_0_1, dd_Smed_v6_5278_0_1, [RH, Score=108, Expect=5e-24]} {RNA1509_40350} {RNA1310_3020} {RNA815_7633}
46. MligTC455_24352 968 20.17 Mlig455_024177, Mlig455_024195

Neo: -

Age: logFC(26M/2M)=-0.541

 RHBG 0.952 - - - - - 0.952

Mlig455_024177 {REF} {Length: 2334} {Pfam: Ammonium Transporter Family [PF00909.23, score=240.1]} {Human: ENSG00000132677, RHBG, Rh family B glycoprotein (gene/pseudogene), [RH, Score=384, Expect=5e-129]} {Mouse: ENSMUSG00000023926, Rhag, Rhesus blood group-associated A glycoprotein, [RH, Score=370, Expect=7e-124]; ENSMUSG00000104445, Rhbg, Rhesus blood group-associated B glycoprotein, [RH, Score=353, Expect=5e-117]} {Dmel: FBgn0028699, Rh50, [RH, Score=372, Expect=3e-124]} {Celegans: WBGene00004358, rhr-1, RH (Rhesus) antigen Related, [RH, Score=357, Expect=1e-118]} {Smed: dd_Smed_v6_1882_0_2, dd_Smed_v6_1882_0_2, [Score=400, Expect=1e-135]} {RNA1509_21244, RNA1509_31957, RNA1509_49768} {RNA1310_10990, RNA1509_21244, RNA1509_31957, RNA1509_49768} {RNA1509_21244, RNA1509_31957, RNA1509_49768, RNA815_4501.1}

Mlig455_024195 {REF} {Length: 3261} {Pfam: Ammonium Transporter Family [PF00909.23, score=236.6]} {Human: ENSG00000132677, RHBG, Rh family B glycoprotein (gene/pseudogene), [RH, Score=382, Expect=3e-128]} {Mouse: ENSMUSG00000104445, Rhbg, Rhesus blood group-associated B glycoprotein, [RH, Score=352, Expect=5e-117]} {Dmel: FBgn0028699, Rh50, [RH, Score=372, Expect=6e-125]} {Celegans: WBGene00004358, rhr-1, RH (Rhesus) antigen Related, [Score=354, Expect=8e-118]} {Smed: dd_Smed_v6_1882_0_2, dd_Smed_v6_1882_0_2, [Score=397, Expect=9e-135]} {RNA1509_21244} {RNA1310_10990} {RNA815_4501.1}
47. MligTC455_23007 17 0.35 Mlig455_001777

Neo: Irradiation

Age: Up-Down-Down

 0.951 - - - - 0.951 - Mlig455_001777 {REF} {Length: 3794} {RNA1509_34381} {RNA1310_46633, RNA1509_34381} {RNA1509_34381, RNA815_24514}
48. MligTC455_40585 87 1.82 Mlig455_052406, Mlig455_069786

Neo: Int S/G2/M

Age: -

 0.951 - - - - - 0.951

Mlig455_052406 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=37.7]} {RNA1509_45340} {RNA1310_16790, RNA1509_45340} {RNA1509_45340, RNA815_20038}

Mlig455_069786 {REF} {Length: 1478} {TRANSSPLICED} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=57.9]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=77.8, Expect=8e-15]} {Celegans: WBGene00013762, Y113G7B.12, [Score=77.0, Expect=8e-15]} {RNA1509_45340} {RNA1310_16790} {RNA815_20038}
49. MligTC455_14733 159 3.3 Mlig455_069027

Neo: -

Age: -

Region-specific R4: 4.487

Region-enriched R4: 1.872/0.02133

 0.95 - - - - 0.950 - Mlig455_069027 {REF} {Length: 2301} {RNA1509_11718} {RNA1310_48901, RNA1509_11718} {RNA1509_11718, RNA815_45231}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA