M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_16660

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16660 27 0.55 Mlig455_056328

Neo: -

Age: -

 CENPA Mlig455_056328 {REF} {Length: 2270} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.8]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=73.2, Expect=4e-15]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469, RNA1509_27366} {RNA1509_27366, RNA815_14172}

Cumulative graph for MligTC455_16660

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.094 0.932 1.00000 1.00000
RegionR2 3.361 0.932 0.09373 0.37559
RegionR3 -1.584 0.932 1.00000 1.00000
RegionR4 -1.562 0.932 1.00000 1.00000
RegionR5 1.107 0.932 0.23968 0.55107
RegionR6 0.397 0.932 0.48191 1.00000
RegionR7 -0.758 0.932 1.00000 1.00000
RegionR8 -0.867 0.932 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.34 0.932 0.99998 1.00000
RegenerationR2 1.1 0.932 0.40032 0.81448
RegenerationR3 3.906 0.932 0.06488 0.42931
RegenerationR4 3.928 0.932 0.04310 0.33451
RegenerationR5 2.941 0.932 0.06512 0.40184
RegenerationR6 2.954 0.932 0.12214 0.43003
RegenerationBL 4.794 0.932 0.05458 0.27049
RegenerationTP 4.438 0.932 0.12958 0.54215


Genes with expression patterns similar to MligTC455_16660

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16660 27 0.55 Mlig455_056328

Neo: -

Age: -

 CENPA 3 1.000 - - - 1.000 1.000 Mlig455_056328 {REF} {Length: 2270} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.8]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=73.2, Expect=4e-15]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469, RNA1509_27366} {RNA1509_27366, RNA815_14172}
2. MligTC455_54153 180 3.76 Mlig455_016969

Neo: -

Age: -

 1.679 - - - - 0.717 0.962 Mlig455_016969 {REF} {Length: 1511} {TRANSSPLICED} {Smed: dd_Smed_v6_951_0_1, dd_Smed_v6_951_0_1, [RH, Score=59.3, Expect=3e-13]} {RNA1509_34161, RNA1509_51834} {RNA1310_40111, RNA1509_34161, RNA1509_51834} {RNA1509_34161, RNA1509_51834, RNA815_11935}
3. MligTC455_15304 8 0.16 Mlig455_030726

Neo: -

Age: -

 ADAT3 0.991 - - - - 0.991 - Mlig455_030726 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=28.8]; MafB19-like deaminase [PF14437.8, score=20.2]} {Human: ENSG00000213638, ADAT3, adenosine deaminase, tRNA specific 3, [Score=53.5, Expect=8e-07]} {Mouse: ENSMUSG00000113640, Adat3, adenosine deaminase, tRNA-specific 3, [Score=51.6, Expect=2e-06]; ENSMUSG00000035370, Gm49322, predicted gene, 49322, [Score=51.6, Expect=2e-06]} {Dmel: FBgn0034360, CG10927, [Score=52.0, Expect=1e-06]} {Celegans: WBGene00012927, Y47D3A.14, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [Score=115, Expect=3e-28]} {RNA1509_59331} {RNA1310_28342} {RNA815_12542}
4. MligTC455_50930 72 1.49 Mlig455_004647, Mlig455_033044, Mlig455_053127, Mlig455_070976

Neo: -

Age: Up-Down-Up

 RBM12B 0.985 - - - - 0.985 -

Mlig455_004647 {REF} {Length: 374} {NoTransDecoderORF} {RNA1310_56858} {RNA815_51411}

Mlig455_033044 {REF} {Length: 378} {RNA1310_56858} {RNA815_51411}

Mlig455_053127 {REF} {Length: 1707} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=51.2, Expect=1e-06]; ENSG00000221843, C2orf16, chromosome 2 open reading frame 16, [Score=49.3, Expect=7e-06]} {Dmel: FBgn0029697, CG15570, [Score=58.5, Expect=3e-09]} {RNA1509_49895} {RNA1310_36074} {RNA815_51411}

Mlig455_070976 {REF} {Length: 385} {RNA1310_56858} {RNA815_51411}
5. MligTC455_36661 127 2.66 Mlig455_013611

Neo: -

Age: -

 TUBGCP4 0.981 - - - - - 0.981 Mlig455_013611 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=175.2]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=3e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=6e-106]} {RNA1509_20258, RNA1509_45019} {RNA1310_6475, RNA1509_45019} {RNA1509_45019, RNA815_4392}
6. MligTC455_18326 82 1.71 Mlig455_047740

Neo: Irradiation

Age: Up-Down-Down

 MED23 0.977 - - - - 0.977 - Mlig455_047740 {REF} {Length: 4844} {Pfam: Mediator complex subunit 23 [PF11573.10, score=275.4]} {Human: ENSG00000112282, MED23, mediator complex subunit 23, [RH, Score=174, Expect=4e-43]} {Mouse: ENSMUSG00000019984, Med23, mediator complex subunit 23, [RH, Score=167, Expect=3e-41]} {Dmel: FBgn0034795, MED23, Mediator complex subunit 23, [RH, Score=159, Expect=5e-39]} {Smed: dd_Smed_v6_8836_0_1, dd_Smed_v6_8836_0_1, [RH, Score=103, Expect=4e-22]} {RNA1509_13212} {RNA1310_1604} {RNA815_2253}
7. MligTC455_28595 113 2.35 Mlig455_025485, Mlig455_057449

Neo: -

Age: -

 0.975 - - - - - 0.975

Mlig455_025485 {REF} {Length: 1322} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17062} {RNA815_22796.1}

Mlig455_057449 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}
8. MligTC455_45564 117 2.43 Mlig455_006872

Neo: -

Age: logFC(26M/2M)=-2.025

Region-enriched R6: 3.967/0.00318

 ARF3 0.974 - - - - - 0.974 Mlig455_006872 {REF} {Length: 1935} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939, RNA1509_57358} {RNA1509_57358, RNA815_20725}
9. MligTC455_57381 8 0.16 Mlig455_058843

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_058843 {REF} {Length: 235} {NoTransDecoderORF}
10. MligTC455_01182 8 0.17 Mlig455_019244

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_019244 {REF} {Length: 349} {NoTransDecoderORF} {RNA1310_96403}
11. MligTC455_03406 13 0.28 Mlig455_043883

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_043883 {REF} {Length: 725} {RNA1310_32915}
12. MligTC455_04151 10 0.21 Mlig455_045297

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_045297 {REF} {Length: 1865} {RNA1310_83510}
13. MligTC455_40379 65 1.35 Mlig455_008994

Neo: -

Age: -

 SVOP 0.967 - - - - 0.967 - Mlig455_008994 {REF} {Length: 4098} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=26.7]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=96.3, Expect=2e-23]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=87.8, Expect=1e-20]} {Dmel: FBgn0034956, CG4324, [Score=81.3, Expect=1e-18]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=81.6, Expect=6e-19]} {RNA1509_26220} {RNA1310_6321} {RNA815_6500}
14. MligTC455_35794 977 20.36 Mlig455_063000

Neo: -

Age: logFC(26M/2M)=-0.322

 SLC35C2 0.965 - - - - - 0.965 Mlig455_063000 {REF} {Length: 2242} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=78.6]; EamA-like transporter family [PF00892.22, score=20.9]} {Human: ENSG00000080189, SLC35C2, solute carrier family 35 member C2, [RH, Score=333, Expect=3e-112]} {Mouse: ENSMUSG00000017664, Slc35c2, solute carrier family 35, member C2, [RH, Score=323, Expect=4e-108]} {Dmel: FBgn0035449, CG14971, [RH, Score=285, Expect=3e-92]} {Celegans: WBGene00021637, Y47G6A.7, [RH, Score=237, Expect=2e-74]} {Smed: dd_Smed_v6_10022_0_1, dd_Smed_v6_10022_0_1, [RH, Score=392, Expect=9e-136]} {RNA1509_18528} {RNA1310_24905.1} {RNA815_3769.1}
15. MligTC455_09828 80 1.67 Mlig455_052764

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_052764 {REF} {Length: 1206} {NoTransDecoderORF} {RNA1310_17510.1} {RNA815_9674}
16. MligTC455_25629 246 5.13 Mlig455_038787, Mlig455_038796

Neo: -

Age: -

 MTOR 0.962 - - - - - 0.962

Mlig455_038787 {REF} {Length: 9062} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=230.1]; FAT domain [PF02259.25, score=204.1]; Domain of unknown function (DUF3385) [PF11865.10, score=133.7]; FKBP12-rapamycin binding domain [PF08771.13, score=116.2]; FATC domain [PF02260.22, score=49.6]; HEAT repeats [PF13646.8, score=49.5]; HEAT-like repeat [PF13513.8, score=38.0]; HEAT repeat [PF02985.24, score=36.1]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=26.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.1]} {Human: ENSG00000198793, MTOR, mechanistic target of rapamycin kinase, [RH, Score=1802, Expect=0.0]} {Mouse: ENSMUSG00000028991, Mtor, mechanistic target of rapamycin kinase, [RH, Score=1804, Expect=0.0]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [RH, Score=1622, Expect=0.0]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [RH, Score=553, Expect=5e-159]} {Smed: dd_Smed_v6_3921_0_1, dd_Smed_v6_3921_0_1, [RH, Score=831, Expect=0.0]} {RNA1509_2274, RNA1509_44760} {RNA1310_158.1, RNA1509_2274, RNA1509_44760} {RNA1509_2274, RNA1509_44760, RNA815_132}

Mlig455_038796 {REF} {Length: 8981} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=230.1]; FAT domain [PF02259.25, score=204.0]; Domain of unknown function (DUF3385) [PF11865.10, score=133.0]; FKBP12-rapamycin binding domain [PF08771.13, score=116.4]; FATC domain [PF02260.22, score=49.6]; HEAT repeats [PF13646.8, score=49.5]; HEAT-like repeat [PF13513.8, score=37.6]; HEAT repeat [PF02985.24, score=36.1]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=25.5]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.1]} {Human: ENSG00000198793, MTOR, mechanistic target of rapamycin kinase, [RH, Score=1805, Expect=0.0]} {Mouse: ENSMUSG00000028991, Mtor, mechanistic target of rapamycin kinase, [RH, Score=1806, Expect=0.0]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [RH, Score=1619, Expect=0.0]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [RH, Score=553, Expect=5e-159]} {Smed: dd_Smed_v6_3921_0_1, dd_Smed_v6_3921_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_2274, RNA1509_38439} {RNA1310_158.1, RNA1509_38439} {RNA1509_38439, RNA815_132}
17. MligTC455_21435 37 0.77 Mlig455_016499

Neo: -

Age: -

 RTL1 0.961 - - - - - 0.961 Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816}
18. MligTC455_24663 144 3 Mlig455_003946

Neo: Irradiation

Age: -

 MSTO1 0.961 - - - - - 0.961 Mlig455_003946 {REF} {Length: 2430} {TRANSSPLICED} {Pfam: Misato Segment II tubulin-like domain [PF10644.11, score=75.0]; Tubulin domain [PF14881.8, score=35.8]} {Human: ENSG00000125459, MSTO1, misato 1, mitochondrial distribution and morphology regulator, [RH, Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000068922, Msto1, misato 1, mitochondrial distribution and morphology regulator, [RH, Score=106, Expect=8e-24]} {Dmel: FBgn0020272, mst, misato, [RH, Score=122, Expect=3e-29]} {Smed: dd_Smed_v6_11439_0_1, dd_Smed_v6_11439_0_1, [RH, Score=107, Expect=2e-24]} {RNA1509_44476} {RNA1310_14007.2, RNA1509_44476} {RNA1509_44476, RNA815_5955.1}
19. MligTC455_49013 277 5.78 Mlig455_006233

Neo: -

Age: Down-Up-Down

 UBL3 0.96 - - - - - 0.960 Mlig455_006233 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=87.5]; Ubiquitin family [PF00240.25, score=19.0]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=150, Expect=2e-47]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=149, Expect=3e-47]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [RH, Score=145, Expect=1e-42]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=107, Expect=7e-31]} {RNA1509_29746} {RNA1310_56429} {RNA815_28925}
20. MligTC455_28879 85 1.77 Mlig455_006586

Neo: -

Age: -

 ARL16 0.958 - - - - 0.958 - Mlig455_006586 {REF} {Length: 1743} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.0]; G-protein alpha subunit [PF00503.22, score=33.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=31.6]; Signal recognition particle receptor beta subunit [PF09439.12, score=27.9]; Ras family [PF00071.24, score=27.1]; RsgA GTPase [PF03193.18, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=22.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=19.0]} {Human: ENSG00000214087, ARL16, ADP ribosylation factor like GTPase 16, [RH, Score=123, Expect=8e-36]} {Mouse: ENSMUSG00000057594, Arl16, ADP-ribosylation factor-like 16, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0031254, CG13692, [RH, Score=102, Expect=1e-27]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=65.1, Expect=1e-13]} {Smed: dd_Smed_v6_5801_0_1, dd_Smed_v6_5801_0_1, [RH, Score=122, Expect=1e-35]} {RNA1509_21320} {RNA1310_48678} {RNA815_20468}
21. MligTC455_38619 6 0.12 Mlig455_035365

Neo: -

Age: Down-Down-Up

 RNF40 0.958 - - - - 0.958 - Mlig455_035365 {REF} {Length: 3524} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.6]; zinc-RING finger domain [PF14634.8, score=18.6]} {Human: ENSG00000103549, RNF40, ring finger protein 40, [RH, Score=488, Expect=3e-155]} {Mouse: ENSMUSG00000030816, Rnf40, ring finger protein 40, [RH, Score=494, Expect=7e-158]} {Dmel: FBgn0086694, Bre1, [RH, Score=527, Expect=6e-170]} {Celegans: WBGene00007008, rfp-1, E3 ubiquitin-protein ligase bre-1, [RH, Score=149, Expect=1e-36]} {Smed: dd_Smed_v6_4070_0_1, dd_Smed_v6_4070_0_1, [RH, Score=360, Expect=5e-109]} {RNA1509_18812} {RNA1310_3645} {RNA815_443}
22. MligTC455_40593 7 0.14 Mlig455_069780

Neo: -

Age: Up-Down-Down

 0.958 - - - - 0.958 - Mlig455_069780 {REF} {Length: 1128} {TRANSSPLICED} {RNA1509_10472} {RNA1310_55432} {RNA815_50993}
23. MligTC455_11554 55 1.14 Mlig455_031584

Neo: -

Age: Up-Down-Down

 ZNFX1 0.957 - - - - - 0.957 Mlig455_031584 {REF} {Length: 7786} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=115.5]; AAA domain [PF13087.8, score=111.0]; AAA domain [PF13086.8, score=78.9]; AAA domain [PF13245.8, score=31.6]; AAA domain [PF13604.8, score=23.8]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=299, Expect=6e-81]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=297, Expect=2e-80]} {Dmel: FBgn0039165, CG6204, [Score=149, Expect=1e-35]} {Celegans: WBGene00014208, ZK1067.2, [Score=251, Expect=2e-66]} {Smed: dd_Smed_v6_10024_0_1, dd_Smed_v6_10024_0_1, [Score=352, Expect=2e-99]} {RNA1509_11861} {RNA1310_418} {RNA815_9954}
24. MligTC455_29580 523 10.89 Mlig455_004620, Mlig455_004629, Mlig455_004656

Neo: -

Age: -

Region-enriched R8: 2.467/0.03081
Region-enriched R7: 2.313/0.00806

 AP1S2 0.957 - - - - - 0.957

Mlig455_004620 {REF} {Length: 2855} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=261, Expect=2e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=252, Expect=5e-87]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=261, Expect=1e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=252, Expect=3e-87]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=282, Expect=3e-99]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [RH, Score=278, Expect=9e-98]} {Smed: dd_Smed_v6_2365_0_1, dd_Smed_v6_2365_0_1, [RH, Score=274, Expect=5e-96]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_4627}

Mlig455_004629 {REF} {Length: 2802} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=269, Expect=2e-93]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=3e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=269, Expect=1e-93]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=2e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=4e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=1e-88]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=262, Expect=3e-91]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_3355.1}

Mlig455_004656 {REF} {Length: 1887} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=270, Expect=7e-94]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=6e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=270, Expect=5e-94]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=4e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=3e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=8e-89]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=263, Expect=1e-91]} {RNA1509_14918} {RNA1310_7376.1} {RNA815_4627}
25. MligTC455_39981 457 9.52 Mlig455_028079

Neo: Int S/G2/M

Age: -

 MRPL17 0.955 - - - - - 0.955 Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956}
26. MligTC455_15305 6 0.13 Mlig455_030727

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_030727 {REF} {Length: 1329} {TRANSSPLICED} {RNA1509_16193} {RNA1310_25995} {RNA815_12564}
27. MligTC455_51835 161 3.36 Mlig455_008701, Mlig455_033989

Neo: -

Age: Down-Up-Up

 BORCS5 0.954 - - - - - 0.954

Mlig455_008701 {REF} {Length: 1050} {TRANSSPLICED} {Pfam: Tumour suppressor protein [PF10158.11, score=82.0]} {Human: ENSG00000165714, BORCS5, BLOC-1 related complex subunit 5, [Score=97.8, Expect=1e-24]; ENSG00000280689, BORCS5, BLOC-1 related complex subunit 5, [Score=97.8, Expect=1e-24]} {Mouse: ENSMUSG00000042992, Borcs5, BLOC-1 related complex subunit 5, [Score=98.6, Expect=8e-25]} {Smed: dd_Smed_v6_6520_0_1, dd_Smed_v6_6520_0_1, [Score=89.4, Expect=3e-21]} {RNA1509_29941} {RNA1310_29876.1} {RNA815_8571.1}

Mlig455_033989 {REF} {Length: 2555} {TRANSSPLICED} {Pfam: Tumour suppressor protein [PF10158.11, score=100.0]} {Human: ENSG00000280689, BORCS5, BLOC-1 related complex subunit 5, [RH, Score=124, Expect=3e-34]; ENSG00000165714, BORCS5, BLOC-1 related complex subunit 5, [RH, Score=124, Expect=3e-34]} {Mouse: ENSMUSG00000042992, Borcs5, BLOC-1 related complex subunit 5, [RH, Score=124, Expect=2e-34]} {Celegans: WBGene00019126, sam-4, [Score=46.6, Expect=5e-06]} {Smed: dd_Smed_v6_6520_0_1, dd_Smed_v6_6520_0_1, [RH, Score=124, Expect=3e-34]} {RNA1509_29941} {RNA1310_29876.1, RNA1509_29941} {RNA1509_29941, RNA815_8571.1}
28. MligTC455_17960 44 0.92 Mlig455_021047

Neo: -

Age: -

Region-enriched R2: 4.515/0.04131
Region-enriched R4: 3.266/0.03072

 0.953 - - - - - 0.953 Mlig455_021047 {REF} {Length: 2114} {Pfam: SH3 domain [PF17902.3, score=25.9]; Plectin repeat [PF00681.22, score=23.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_53557} {RNA1310_11354} {RNA815_18566}
29. MligTC455_20467 106 2.2 Mlig455_024422

Neo: -

Age: Up-Down-Down

 POU4F2 0.953 - - - - - 0.953 Mlig455_024422 {REF} {Length: 2685} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.5]; Homeodomain [PF00046.31, score=67.5]} {Human: ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=271, Expect=3e-85]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=1e-84]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=265, Expect=1e-83]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=3e-85]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=270, Expect=9e-85]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=265, Expect=7e-84]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=241, Expect=1e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=310, Expect=3e-101]} {RNA1509_57422} {RNA1310_14116} {RNA815_35899}
30. MligTC455_26133 26 0.55 Mlig455_009358

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_009358 {REF} {Length: 2096} {RNA1509_41127} {RNA1310_57948} {RNA815_26816}
31. MligTC455_12988 77 1.61 Mlig455_034660

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_034660 {REF} {Length: 1932} {RNA1509_3330} {RNA1310_28670} {RNA815_4944.1}
32. MligTC455_19216 82 1.71 Mlig455_038007

Neo: Int S/G2/M

Age: -

 0.951 - - - - - 0.951 Mlig455_038007 {REF} {Length: 2594} {TRANSSPLICED} {RNA1509_48249} {RNA1310_31830} {RNA815_49860}
33. MligTC455_48560 57 1.18 Mlig455_046453

Neo: -

Age: -

Region-enriched R2: 5.673/0.03292

 0.951 - - - - - 0.951 Mlig455_046453 {REF} {Length: 1321} {TRANSSPLICED} {RNA1310_43065} {RNA815_11099}
34. MligTC455_57023 35 0.72 Mlig455_025177

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_025177 {REF} {Length: 323} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_99479.1} {RNA815_29511.2}
35. MligTC455_28714 174 3.62 Mlig455_022371, Mlig455_027621

Neo: -

Age: -

 0.95 - - - - - 0.950

Mlig455_022371 {REF} {Length: 654} {Pfam: PAN domain [PF00024.28, score=23.7]} {RNA1310_35396.3} {RNA815_64813}

Mlig455_027621 {REF} {Length: 3080} {Pfam: WSC domain [PF01822.21, score=50.0]; PAN domain [PF00024.28, score=30.3]} {RNA1509_18097} {RNA1310_13811.1} {RNA815_2868}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA