M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_11917

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11917 392 8.16 Mlig455_036149

Neo: -

Age: -

Region-enriched R5: 1.409/0.03123

 ZDHHC20 Mlig455_036149 {REF} {Length: 2425} {Human: ENSG00000180776, ZDHHC20, zinc finger DHHC-type containing 20, [Score=83.2, Expect=4e-19]; ENSG00000104219, ZDHHC2, zinc finger DHHC-type containing 2, [Score=80.9, Expect=3e-18]; ENSG00000102383, ZDHHC15, zinc finger DHHC-type containing 15, [Score=79.3, Expect=1e-17]} {Mouse: ENSMUSG00000039470, Zdhhc2, zinc finger, DHHC domain containing 2, [Score=82.8, Expect=4e-19]} {Dmel: FBgn0033474, CG1407, [Score=110, Expect=4e-29]} {Celegans: WBGene00014075, dhhc-4, Zinc finger DHHC domain-containing protein 4, [Score=62.8, Expect=4e-12]} {Smed: dd_Smed_v6_6233_0_2, dd_Smed_v6_6233_0_2, [Score=92.8, Expect=1e-24]} {RNA1509_34679, RNA1509_7705} {RNA1310_6792.1, RNA1509_34679} {RNA1509_34679, RNA815_2390.1}

Cumulative graph for MligTC455_11917

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.3 3.389 0.82559 1.00000
RegionR2 0.498 3.389 0.47549 0.86086
RegionR3 0.507 3.389 0.37114 0.90578
RegionR4 -0.042 3.389 0.95626 1.00000
RegionR5 1.409 3.389 0.00436 0.03123
RegionR6 0.877 3.389 0.12507 0.64332
RegionR7 -0.736 3.389 0.37244 1.00000
RegionR8 -2.213 3.389 0.06475 0.49306

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.539 3.389 0.47292 1.00000
RegenerationR2 -0.255 3.389 0.66703 0.94426
RegenerationR3 0.18 3.389 0.77939 0.97488
RegenerationR4 0.583 3.389 0.38164 0.80242
RegenerationR5 0.247 3.389 0.67481 0.94298
RegenerationR6 -0.166 3.389 0.79380 0.97402
RegenerationBL 0.561 3.389 0.50757 0.87111
RegenerationTP 2.489 3.389 0.00376 0.10256


Genes with expression patterns similar to MligTC455_11917

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11917 392 8.16 Mlig455_036149

Neo: -

Age: -

Region-enriched R5: 1.409/0.03123

 ZDHHC20 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_036149 {REF} {Length: 2425} {Human: ENSG00000180776, ZDHHC20, zinc finger DHHC-type containing 20, [Score=83.2, Expect=4e-19]; ENSG00000104219, ZDHHC2, zinc finger DHHC-type containing 2, [Score=80.9, Expect=3e-18]; ENSG00000102383, ZDHHC15, zinc finger DHHC-type containing 15, [Score=79.3, Expect=1e-17]} {Mouse: ENSMUSG00000039470, Zdhhc2, zinc finger, DHHC domain containing 2, [Score=82.8, Expect=4e-19]} {Dmel: FBgn0033474, CG1407, [Score=110, Expect=4e-29]} {Celegans: WBGene00014075, dhhc-4, Zinc finger DHHC domain-containing protein 4, [Score=62.8, Expect=4e-12]} {Smed: dd_Smed_v6_6233_0_2, dd_Smed_v6_6233_0_2, [Score=92.8, Expect=1e-24]} {RNA1509_34679, RNA1509_7705} {RNA1310_6792.1, RNA1509_34679} {RNA1509_34679, RNA815_2390.1}
2. MligTC455_17131 246 5.12 Mlig455_057133

Neo: -

Age: -

 2.708 - - 0.860 0.952 - 0.896 Mlig455_057133 {REF} {Length: 1344} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=88.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=106, Expect=6e-30]} {RNA1509_43433} {RNA1310_48457} {RNA815_14530}
3. MligTC455_17132 246 5.12 Mlig455_069284

Neo: -

Age: -

 2.681 - - 0.834 0.953 - 0.894 Mlig455_069284 {REF} {Length: 6700} {Pfam: Universal stress protein family [PF00582.28, score=88.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=106, Expect=6e-30]} {RNA1509_43433} {RNA1310_48457, RNA1509_43433} {RNA1509_43433, RNA815_14530}
4. MligTC455_20228 160 3.33 Mlig455_025853, Mlig455_025915

Neo: Irradiation

Age: -

Region-enriched R5: 2.361/0.00341

 BLM 2.471 0.952 0.740 - - - 0.779

Mlig455_025853 {REF} {Length: 4872} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.7]; Helicase conserved C-terminal domain [PF00271.33, score=64.4]; RecQ zinc-binding [PF16124.7, score=57.3]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; Type III restriction enzyme, res subunit [PF04851.17, score=26.0]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [RH, Score=560, Expect=6e-176]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [RH, Score=555, Expect=5e-174]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [RH, Score=568, Expect=1e-178]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=484, Expect=5e-152]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [RH, Score=662, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}

Mlig455_025915 {REF} {Length: 4878} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.6]; Helicase conserved C-terminal domain [PF00271.33, score=64.2]; RecQ zinc-binding [PF16124.7, score=57.2]; HRDC domain [PF00570.25, score=42.4]; RQC domain [PF09382.12, score=39.3]; Type III restriction enzyme, res subunit [PF04851.17, score=25.9]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [RH, Score=558, Expect=1e-174]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [RH, Score=553, Expect=2e-172]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [RH, Score=567, Expect=2e-177]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=483, Expect=3e-151]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [RH, Score=661, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}
5. MligTC455_26869 1216 25.33 Mlig455_008292, Mlig455_040658, Mlig455_062060

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.447

Region-enriched R5: 2.624/0.00000

 1.824 - - 0.956 0.868 - -

Mlig455_008292 {REF} {Length: 2124} {TRANSSPLICED} {RNA1509_18957, RNA1509_37791} {RNA1310_20612.1, RNA1509_37791} {RNA1509_37791, RNA815_26913}

Mlig455_040658 {REF} {Length: 2312} {TRANSSPLICED} {RNA1509_18957} {RNA1310_20612.1} {RNA815_26913}

Mlig455_062060 {REF} {Length: 2680} {TRANSSPLICED} {RNA1509_18957, RNA1509_32011} {RNA1310_20612.1, RNA1509_32011} {RNA1509_32011, RNA815_26913}
6. MligTC455_19905 396 8.25 Mlig455_041113

Neo: -

Age: -

 CLIP1 1.815 0.963 - - - - 0.852 Mlig455_041113 {REF} {Length: 3229} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=148.6]; CLIP1 zinc knuckle [PF16641.7, score=54.0]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=26.6]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=22.0]; Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=19.3]; Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=18.9]; PDZ domain of MCC-2 bdg protein for Usher syndrome [PF10506.11, score=18.9]} {Human: ENSG00000130779, CLIP1, CAP-Gly domain containing linker protein 1, [RH, Score=224, Expect=8e-61]; ENSG00000106665, CLIP2, CAP-Gly domain containing linker protein 2, [RH, Score=214, Expect=1e-57]} {Mouse: ENSMUSG00000049550, Clip1, CAP-GLY domain containing linker protein 1, [RH, Score=221, Expect=1e-59]; ENSMUSG00000063146, Clip2, CAP-GLY domain containing linker protein 2, [RH, Score=212, Expect=4e-57]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [RH, Score=214, Expect=1e-57]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [Score=72.4, Expect=8e-13]} {Smed: dd_Smed_v6_6651_0_1, dd_Smed_v6_6651_0_1, [RH, Score=191, Expect=1e-50]} {RNA1509_59311, RNA1509_6017} {RNA1310_1622, RNA1509_59311, RNA1509_6017} {RNA1509_59311, RNA1509_6017, RNA815_1338}
7. MligTC455_49738 135 2.81 Mlig455_038770

Neo: -

Age: -

 1.777 - - 0.955 - - 0.822 Mlig455_038770 {REF} {Length: 641} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27803} {RNA1310_53700, RNA1509_27803} {RNA1509_27803, RNA815_27923}
8. MligTC455_38006 477 9.94 Mlig455_031560

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.222

 NOP2 1.772 - - - 0.821 - 0.951 Mlig455_031560 {REF} {Length: 2437} {TRANSSPLICED} {Pfam: 16S rRNA methyltransferase RsmB/F [PF01189.19, score=244.8]; N-terminal domain of 16S rRNA methyltransferase RsmF [PF17125.7, score=34.1]; FtsJ-like methyltransferase [PF01728.21, score=25.9]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=25.8]; Methyltransferase domain [PF13847.8, score=23.5]; Met-10+ like-protein [PF02475.18, score=19.8]} {Human: ENSG00000111641, NOP2, NOP2 nucleolar protein, [RH, Score=470, Expect=2e-156]} {Mouse: ENSMUSG00000038279, Nop2, NOP2 nucleolar protein, [RH, Score=464, Expect=1e-154]} {Dmel: FBgn0037200, CG11109, [Score=119, Expect=3e-29]} {Celegans: WBGene00021073, nol-1, NucleOLar protein, [RH, Score=394, Expect=3e-129]} {Smed: dd_Smed_v6_7417_0_1, dd_Smed_v6_7417_0_1, [RH, Score=394, Expect=8e-131]} {RNA1509_4575} {RNA1310_9187.1, RNA1509_4575} {RNA1509_4575, RNA815_3009.1}
9. MligTC455_24531 531 11.06 Mlig455_043484

Neo: Irradiation

Age: -

 DNAJB14 1.718 0.768 - 0.950 - - - Mlig455_043484 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=83.3]} {Human: ENSG00000164031, DNAJB14, DnaJ heat shock protein family (Hsp40) member B14, [Score=83.6, Expect=4e-18]; ENSG00000170464, DNAJC18, DnaJ heat shock protein family (Hsp40) member C18, [Score=82.8, Expect=7e-18]} {Mouse: ENSMUSG00000074212, Dnajb14, DnaJ heat shock protein family (Hsp40) member B14, [Score=84.3, Expect=3e-20]; ENSMUSG00000020109, Dnajb12, DnaJ heat shock protein family (Hsp40) member B12, [Score=82.4, Expect=9e-18]} {Dmel: FBgn0034091, mrj, [Score=77.8, Expect=2e-16]} {Celegans: WBGene00001019, dnj-1, DnaJ homolog subfamily B member 1, [Score=71.6, Expect=3e-14]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [Score=72.8, Expect=2e-15]} {RNA1509_21677, RNA1509_33477, RNA1509_49809, RNA1509_53673, RNA1509_57405} {RNA1310_28140, RNA1509_21677, RNA1509_33477, RNA1509_49809, RNA1509_53673, RNA1509_57405} {RNA1509_21677, RNA1509_33477, RNA1509_49809, RNA1509_53673, RNA1509_57405, RNA815_16763}
10. MligTC455_42053 93 1.93 Mlig455_027261

Neo: -

Age: Down-Up-Down

 0.973 0.973 - - - - - Mlig455_027261 {REF} {Length: 1018} {NoTransDecoderORF} {RNA1509_32735} {RNA1310_29165.1} {RNA815_31830}
11. MligTC455_45699 631 13.14 Mlig455_002869

Neo: Neoblast

Age: -

 POLR2I 0.968 - - - 0.968 - - Mlig455_002869 {REF} {Length: 2055} {TRANSSPLICED} {Pfam: RNA polymerases M/15 Kd subunit [PF02150.18, score=51.0]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.6]; Recombinase zinc beta ribbon domain [PF13408.8, score=25.9]; Ogr/Delta-like zinc finger [PF04606.14, score=22.3]} {Human: ENSG00000105258, POLR2I, RNA polymerase II subunit I, [RH, Score=174, Expect=1e-56]} {Mouse: ENSMUSG00000019738, Polr2i, polymerase (RNA) II (DNA directed) polypeptide I, [RH, Score=174, Expect=7e-57]} {Dmel: FBgn0004855, RpII15, RNA polymerase II 15kD subunit, [RH, Score=178, Expect=2e-58]} {Celegans: WBGene00022400, rpb-9, DNA-directed RNA polymerase subunit, [RH, Score=178, Expect=4e-58]} {Smed: dd_Smed_v6_3867_0_1, dd_Smed_v6_3867_0_1, [RH, Score=163, Expect=5e-53]} {RNA1509_30096} {RNA1310_52434, RNA1509_30096} {RNA1509_30096, RNA815_28699}
12. MligTC455_48801 537 11.18 Mlig455_054489

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=0.685

Region-enriched R5: 1.314/0.00537

 0.967 - - - - - 0.967 Mlig455_054489 {REF} {Length: 1148} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YagE family COG1723 [PF02582.16, score=105.1]} {Dmel: FBgn0030678, CG11679, [RH, Score=136, Expect=1e-36]} {Celegans: WBGene00014176, ZK1010.2, [RH, Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8446_0_2, dd_Smed_v6_8446_0_2, [RH, Score=95.9, Expect=2e-22]} {RNA1509_19052} {RNA1310_16765} {RNA815_13720}
13. MligTC455_19444 2615 54.48 Mlig455_002765, Mlig455_050252

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=-0.567

 0.962 - - - - 0.962 -

Mlig455_002765 {REF} {Length: 718} {RNA1509_22419} {RNA1310_5535, RNA1509_22419} {RNA1509_22419, RNA815_6435}

Mlig455_050252 {REF} {Length: 956} {RNA1509_22419} {RNA1310_5535} {RNA815_6435}
14. MligTC455_51080 68 1.41 Mlig455_012101

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.555

 THAP2 0.961 - - - - 0.961 - Mlig455_012101 {REF} {Length: 2218} {Pfam: THAP domain [PF05485.14, score=58.0]} {Human: ENSG00000173451, THAP2, THAP domain containing 2, [Score=64.3, Expect=1e-11]} {Mouse: ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=65.1, Expect=3e-12]} {RNA1509_46373} {RNA1310_33057} {RNA815_6917.1}
15. MligTC455_10394 1968 41.01 Mlig455_059906

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.548

 0.959 - - - - 0.959 - Mlig455_059906 {REF} {Length: 1095} {Pfam: EF hand [PF00036.34, score=40.0]; EF-hand domain pair [PF13499.8, score=33.1]; EF-hand domain [PF13405.8, score=29.7]; EF hand [PF13202.8, score=23.1]} {RNA1509_16615} {RNA1310_34130.1, RNA1509_16615} {RNA1509_16615, RNA815_15871.1}
16. MligTC455_40742 385 8.02 Mlig455_018366

Neo: -

Age: -

 PRKAG1 0.956 - - - 0.956 - - Mlig455_018366 {REF} {Length: 3446} {Pfam: CBS domain [PF00571.30, score=102.5]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [RH, Score=373, Expect=2e-123]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [RH, Score=365, Expect=8e-117]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [RH, Score=374, Expect=6e-124]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [RH, Score=365, Expect=4e-117]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [Score=376, Expect=6e-121]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [Score=324, Expect=1e-102]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [Score=288, Expect=1e-90]} {RNA1509_26664} {RNA1310_9847} {RNA815_7999}
17. MligTC455_42163 1246 25.95 Mlig455_048416

Neo: Int S/G2/M

Age: Down-Down-Up

 DR1 0.956 - - - 0.956 - - Mlig455_048416 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA1509_7108} {RNA1310_37108, RNA1509_14024, RNA1509_24840, RNA1509_26197} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA815_17293}
18. MligTC455_51081 100 2.09 Mlig455_029025

Neo: -

Age: -

 THAP2 0.956 - - - - 0.956 - Mlig455_029025 {REF} {Length: 3115} {Pfam: THAP domain [PF05485.14, score=58.0]} {Human: ENSG00000173451, THAP2, THAP domain containing 2, [Score=64.3, Expect=1e-11]} {Mouse: ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=65.1, Expect=3e-12]} {RNA1509_46373, RNA1509_47157} {RNA1310_33057, RNA1509_46373, RNA1509_47157} {RNA1509_46373, RNA1509_47157, RNA815_6917.1}
19. MligTC455_23840 421 8.78 Mlig455_022906

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_022906 {REF} {Length: 4155} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=26.8]} {RNA1509_28157, RNA1509_53765} {RNA1310_21290.1, RNA1509_28157, RNA1509_53765} {RNA1509_28157, RNA1509_53765, RNA815_11133}
20. MligTC455_32534 166 3.46 Mlig455_034593, Mlig455_040890

Neo: -

Age: -

Region-enriched R4: 2.124/0.04916

 0.954 - - - 0.954 - -

Mlig455_034593 {REF} {Length: 1979} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46555} {RNA1310_8675} {RNA815_3094.1}

Mlig455_040890 {REF} {Length: 980} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1}
21. MligTC455_21957 871 18.15 Mlig455_002154, Mlig455_002253, Mlig455_002297

Neo: -

Age: -

Region-enriched R4: 2.355/0.00314

 CMTR1 0.952 - - - - - 0.952

Mlig455_002154 {REF} {Length: 3652} {TRANSSPLICED} {Pfam: FtsJ-like methyltransferase [PF01728.21, score=113.4]; G-patch domain [PF01585.25, score=46.4]} {Human: ENSG00000137200, CMTR1, cap methyltransferase 1, [RH, Score=421, Expect=9e-135]} {Mouse: ENSMUSG00000024019, Cmtr1, cap methyltransferase 1, [RH, Score=430, Expect=4e-138]} {Dmel: FBgn0029693, CG6379, [RH, Score=376, Expect=2e-118]} {Celegans: WBGene00013160, Y53F4B.13, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, [RH, Score=396, Expect=2e-124]} {Smed: dd_Smed_v6_8545_1_1, dd_Smed_v6_8545_1_1, [RH, Score=404, Expect=7e-130]} {RNA1509_10618, RNA1509_37755} {RNA1310_3803, RNA1509_37755} {RNA1509_37755, RNA815_2347}

Mlig455_002253 {REF} {Length: 3740} {TRANSSPLICED} {Pfam: FtsJ-like methyltransferase [PF01728.21, score=113.4]; G-patch domain [PF01585.25, score=46.5]} {Human: ENSG00000137200, CMTR1, cap methyltransferase 1, [RH, Score=422, Expect=9e-135]} {Mouse: ENSMUSG00000024019, Cmtr1, cap methyltransferase 1, [RH, Score=429, Expect=1e-137]} {Dmel: FBgn0029693, CG6379, [RH, Score=375, Expect=7e-118]} {Celegans: WBGene00013160, Y53F4B.13, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, [RH, Score=394, Expect=7e-124]} {Smed: dd_Smed_v6_8545_1_1, dd_Smed_v6_8545_1_1, [RH, Score=402, Expect=5e-129]} {RNA1509_10618} {RNA1310_3803, RNA1509_10618} {RNA1509_10618, RNA815_2347}

Mlig455_002297 {REF} {Length: 3568} {TRANSSPLICED} {Pfam: FtsJ-like methyltransferase [PF01728.21, score=113.4]; G-patch domain [PF01585.25, score=46.4]} {Human: ENSG00000137200, CMTR1, cap methyltransferase 1, [RH, Score=421, Expect=1e-134]} {Mouse: ENSMUSG00000024019, Cmtr1, cap methyltransferase 1, [RH, Score=429, Expect=6e-138]} {Dmel: FBgn0029693, CG6379, [RH, Score=377, Expect=2e-118]} {Celegans: WBGene00013160, Y53F4B.13, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, [RH, Score=395, Expect=2e-124]} {Smed: dd_Smed_v6_8545_1_1, dd_Smed_v6_8545_1_1, [RH, Score=405, Expect=2e-130]} {RNA1509_10618} {RNA1310_3803} {RNA815_2347}
22. MligTC455_42766 623 12.97 Mlig455_055089, Mlig455_064029

Neo: Int S/G2/M

Age: -

 AHNAK2 0.951 - - - 0.951 - -

Mlig455_055089 {REF} {Length: 6503} {TRANSSPLICED} {Human: ENSG00000185567, AHNAK2, AHNAK nucleoprotein 2, [Score=67.0, Expect=3e-10]} {Mouse: ENSMUSG00000116477, MF597757.2, [Score=55.8, Expect=6e-07]; ENSMUSG00000072812, Ahnak2, AHNAK nucleoprotein 2, [Score=53.1, Expect=4e-06]} {RNA1509_23810, RNA1509_28913, RNA1509_54659} {RNA1310_9986, RNA1509_28913, RNA1509_54659} {RNA1509_28913, RNA1509_54659, RNA815_12447.1}

Mlig455_064029 {REF} {Length: 6122} {TRANSSPLICED} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=53.1, Expect=4e-06]} {RNA1509_23810, RNA1509_54093} {RNA1310_9986, RNA1509_54093} {RNA1509_54093, RNA815_12447.1}
23. MligTC455_15302 323 6.74 Mlig455_026971

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_026971 {REF} {Length: 1270} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=19.3]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [Score=138, Expect=2e-38]} {RNA1509_59331} {RNA1310_28342, RNA1509_59331} {RNA1509_59331, RNA815_12542}
24. MligTC455_22964 20 0.42 Mlig455_033179

Neo: Irradiation

Age: logFC(26M/2M)=0.775

 0.95 - - - - 0.950 - Mlig455_033179 {REF} {Length: 3668} {TRANSSPLICED} {Pfam: Autophagy protein 16 (ATG16) [PF08614.13, score=55.4]; Fez1 [PF06818.17, score=33.5]; Ezrin/radixin/moesin family [PF00769.21, score=28.5]; Crescentin protein [PF19220.2, score=27.2]; Intermediate filament protein [PF00038.23, score=25.1]; Tropomyosin like [PF12718.9, score=20.0]; Arabidopsis phospholipase-like protein (PEARLI 4) [PF05278.14, score=19.3]; Myosin tail [PF01576.21, score=17.6]} {RNA1509_7077} {RNA1310_18593.1, RNA1509_7077} {RNA1509_7077, RNA815_1697}
25. MligTC455_35685 108 2.25 Mlig455_038913

Neo: -

Age: Down-Up-Up

 0.95 0.950 - - - - - Mlig455_038913 {REF} {Length: 3021} {TRANSSPLICED} {RNA1509_23775} {RNA1310_36621} {RNA815_21653}
26. MligTC455_48100 335 6.97 Mlig455_018371

Neo: -

Age: logFC(26M/2M)=-0.384

 LRRC71 0.95 0.950 - - - - - Mlig455_018371 {REF} {Length: 2302} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=67.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.9]; Leucine Rich Repeat [PF00560.35, score=24.2]} {Human: ENSG00000160838, LRRC71, leucine rich repeat containing 71, [RH, Score=202, Expect=1e-57]} {Mouse: ENSMUSG00000023084, Lrrc71, leucine rich repeat containing 71, [RH, Score=200, Expect=9e-57]} {Smed: dd_Smed_v6_12043_0_2, dd_Smed_v6_12043_0_2, [RH, Score=224, Expect=3e-67]} {RNA1509_21151, RNA1509_55854, RNA1509_5738} {RNA1310_2341.1, RNA1509_21151, RNA1509_55854, RNA1509_5738} {RNA1509_21151, RNA1509_55854, RNA1509_5738, RNA815_677.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA