TomoSeq data search

Data search

Results for MligTC455_45699

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45699

631

13.14

Mlig455_002869

Age: -

POLR2I

Mlig455_002869 {REF} {Length: 2055} {TRANSSPLICED} {Pfam: RNA polymerases M/15 Kd subunit [PF02150.18, score=51.0]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.6]; Recombinase zinc beta ribbon domain [PF13408.8, score=25.9]; Ogr/Delta-like zinc finger [PF04606.14, score=22.3]} {Human: ENSG00000105258, POLR2I, RNA polymerase II subunit I, [RH, Score=174, Expect=1e-56]} {Mouse: ENSMUSG00000019738, Polr2i, polymerase (RNA) II (DNA directed) polypeptide I, [RH, Score=174, Expect=7e-57]} {Dmel: FBgn0004855, RpII15, RNA polymerase II 15kD subunit, [RH, Score=178, Expect=2e-58]} {Celegans: WBGene00022400, rpb-9, DNA-directed RNA polymerase subunit, [RH, Score=178, Expect=4e-58]} {Smed: dd_Smed_v6_3867_0_1, dd_Smed_v6_3867_0_1, [RH, Score=163, Expect=5e-53]} {RNA1509_30096} {RNA1310_52434, RNA1509_30096} {RNA1509_30096, RNA815_28699}

Cumulative graph for MligTC455_45699

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.276	4.067	0.23675	0.88107
RegionR2	0.183	4.067	0.69015	1.00000
RegionR3	0.474	4.067	0.14829	0.65412
RegionR4	0.284	4.067	0.50035	0.82703
RegionR5	0.104	4.067	0.73373	1.00000
RegionR6	-0.172	4.067	0.63871	1.00000
RegionR7	-0.463	4.067	0.35149	0.98724
RegionR8	0.865	4.067	0.08017	0.53809

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.591	4.067	0.06619	0.74387
RegenerationR2	-0.243	4.067	0.55259	0.89473
RegenerationR3	-0.477	4.067	0.25528	0.68963
RegenerationR4	-0.67	4.067	0.11242	0.51414
RegenerationR5	0.432	4.067	0.23395	0.66778
RegenerationR6	0.339	4.067	0.44780	0.76877
RegenerationBL	-2.057	4.067	0.01709	0.13936
RegenerationTP	-0.028	4.067	0.96251	1.00000

Genes with expression patterns similar to MligTC455_45699

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45699	631	13.14	Mlig455_002869	Neo: Neoblast Age: -	POLR2I	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002869 {REF} {Length: 2055} {TRANSSPLICED} {Pfam: RNA polymerases M/15 Kd subunit [PF02150.18, score=51.0]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.6]; Recombinase zinc beta ribbon domain [PF13408.8, score=25.9]; Ogr/Delta-like zinc finger [PF04606.14, score=22.3]} {Human: ENSG00000105258, POLR2I, RNA polymerase II subunit I, [RH, Score=174, Expect=1e-56]} {Mouse: ENSMUSG00000019738, Polr2i, polymerase (RNA) II (DNA directed) polypeptide I, [RH, Score=174, Expect=7e-57]} {Dmel: FBgn0004855, RpII15, RNA polymerase II 15kD subunit, [RH, Score=178, Expect=2e-58]} {Celegans: WBGene00022400, rpb-9, DNA-directed RNA polymerase subunit, [RH, Score=178, Expect=4e-58]} {Smed: dd_Smed_v6_3867_0_1, dd_Smed_v6_3867_0_1, [RH, Score=163, Expect=5e-53]} {RNA1509_30096} {RNA1310_52434, RNA1509_30096} {RNA1509_30096, RNA815_28699}
2.	MligTC455_20656	2458	51.2	Mlig455_036375, Mlig455_036409, Mlig455_054581	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.237 Region-enriched R2: 1.243/0.02511 Regeneration-enriched R1: 4.132	GNL3L	1.777	-	-	-	-	0.953	0.824	Mlig455_036375 {REF} {Length: 2494} {Pfam: GNL3L/Grn1 putative GTPase [PF08701.13, score=67.0]; 50S ribosome-binding GTPase [PF01926.25, score=55.4]; Ferrous iron transport protein B [PF02421.20, score=29.7]; Double-GTPase 2 [PF19993.1, score=27.0]; Dynamin family [PF00350.25, score=24.4]} {Human: ENSG00000130119, GNL3L, G protein nucleolar 3 like, [RH, Score=288, Expect=5e-89]; ENSG00000163938, GNL3, G protein nucleolar 3, [RH, Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [RH, Score=285, Expect=4e-88]} {Dmel: FBgn0038473, Ns1, Nucleostemin 1, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00003821, nst-1, Guanine nucleotide-binding protein-like 3 homolog, [RH, Score=367, Expect=4e-120]} {Smed: dd_Smed_v6_676_0_1, dd_Smed_v6_676_0_1, [RH, Score=272, Expect=9e-85]} {RNA1509_11558, RNA1509_15875, RNA1509_23651, RNA1509_3071} {RNA1310_14327, RNA1509_11558, RNA1509_15875, RNA1509_23651} {RNA1509_11558, RNA1509_15875, RNA1509_23651, RNA815_5246} Mlig455_036409 {REF} {Length: 2340} {Pfam: GNL3L/Grn1 putative GTPase [PF08701.13, score=68.6]; 50S ribosome-binding GTPase [PF01926.25, score=48.3]; Ferrous iron transport protein B [PF02421.20, score=25.5]; Dynamin family [PF00350.25, score=20.3]} {Human: ENSG00000130119, GNL3L, G protein nucleolar 3 like, [Score=203, Expect=1e-57]; ENSG00000163938, GNL3, G protein nucleolar 3, [Score=197, Expect=1e-55]} {Mouse: ENSMUSG00000042354, Gnl3, guanine nucleotide binding protein-like 3 (nucleolar), [Score=206, Expect=6e-59]; ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [Score=204, Expect=5e-58]} {Dmel: FBgn0038473, Ns1, Nucleostemin 1, [Score=242, Expect=2e-72]} {Celegans: WBGene00003821, nst-1, Guanine nucleotide-binding protein-like 3 homolog, [Score=293, Expect=4e-92]} {Smed: dd_Smed_v6_676_0_1, dd_Smed_v6_676_0_1, [Score=214, Expect=5e-63]} {RNA1509_11558} {RNA1310_14327} {RNA815_5246} Mlig455_054581 {REF} {Length: 2574} {Pfam: GNL3L/Grn1 putative GTPase [PF08701.13, score=67.0]; 50S ribosome-binding GTPase [PF01926.25, score=55.4]; Ferrous iron transport protein B [PF02421.20, score=29.7]; Double-GTPase 2 [PF19993.1, score=27.0]; Dynamin family [PF00350.25, score=24.4]} {Human: ENSG00000130119, GNL3L, G protein nucleolar 3 like, [RH, Score=288, Expect=5e-89]; ENSG00000163938, GNL3, G protein nucleolar 3, [RH, Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [RH, Score=285, Expect=4e-88]} {Dmel: FBgn0038473, Ns1, Nucleostemin 1, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00003821, nst-1, Guanine nucleotide-binding protein-like 3 homolog, [RH, Score=367, Expect=4e-120]} {Smed: dd_Smed_v6_676_0_1, dd_Smed_v6_676_0_1, [RH, Score=272, Expect=9e-85]} {RNA1509_3071} {RNA1310_14327, RNA1509_3071} {RNA1509_3071, RNA815_5246}
3.	MligTC455_26450	513	10.68	Mlig455_026617, Mlig455_052766	Neo: - Age: -	SLC50A1	1.762	-	-	-	0.797	0.965	-	Mlig455_026617 {REF} {Length: 542} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=65.9, Expect=4e-13]} {RNA1509_10005} {RNA1310_397.1} {RNA815_1257.1} Mlig455_052766 {REF} {Length: 5041} {TRANSSPLICED} {Pfam: Sugar efflux transporter for intercellular exchange [PF03083.18, score=90.2]; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit [PF08626.13, score=33.9]; ER-Golgi trafficking TRAPP I complex 85 kDa subunit [PF12739.9, score=18.0]} {Human: ENSG00000169241, SLC50A1, solute carrier family 50 member 1, [RH, Score=72.0, Expect=1e-13]} {Mouse: ENSMUSG00000027953, Slc50a1, solute carrier family 50 (sugar transporter), member 1, [RH, Score=87.0, Expect=1e-18]} {Dmel: FBgn0025469, slv, saliva, [Score=98.2, Expect=2e-22]} {Celegans: WBGene00016922, swt-2, Sugar transporter SWEET, [RH, Score=101, Expect=9e-24]} {Smed: dd_Smed_v6_12308_0_1, dd_Smed_v6_12308_0_1, [Score=104, Expect=5e-25]} {RNA1509_23128} {RNA1310_2990} {RNA815_1540}
4.	MligTC455_19687	194	4.04	Mlig455_037623	Neo: - Age: -	CCNQ	0.976	-	-	-	-	0.976	-	Mlig455_037623 {REF} {Length: 2275} {TRANSSPLICED} {Human: ENSG00000262919, CCNQ, cyclin Q, [Score=87.4, Expect=9e-21]} {Mouse: ENSMUSG00000049489, Ccnq, cyclin Q, [Score=84.3, Expect=1e-19]} {RNA1509_34677} {RNA1310_40105.1} {RNA815_11835}
5.	MligTC455_11917	392	8.16	Mlig455_036149	Neo: - Age: - Region-enriched R5: 1.409/0.03123	ZDHHC20	0.968	-	-	-	0.968	-	-	Mlig455_036149 {REF} {Length: 2425} {Human: ENSG00000180776, ZDHHC20, zinc finger DHHC-type containing 20, [Score=83.2, Expect=4e-19]; ENSG00000104219, ZDHHC2, zinc finger DHHC-type containing 2, [Score=80.9, Expect=3e-18]; ENSG00000102383, ZDHHC15, zinc finger DHHC-type containing 15, [Score=79.3, Expect=1e-17]} {Mouse: ENSMUSG00000039470, Zdhhc2, zinc finger, DHHC domain containing 2, [Score=82.8, Expect=4e-19]} {Dmel: FBgn0033474, CG1407, [Score=110, Expect=4e-29]} {Celegans: WBGene00014075, dhhc-4, Zinc finger DHHC domain-containing protein 4, [Score=62.8, Expect=4e-12]} {Smed: dd_Smed_v6_6233_0_2, dd_Smed_v6_6233_0_2, [Score=92.8, Expect=1e-24]} {RNA1509_34679, RNA1509_7705} {RNA1310_6792.1, RNA1509_34679} {RNA1509_34679, RNA815_2390.1}
6.	MligTC455_45818	312	6.51	Mlig455_009757, Mlig455_070114	Neo: - Age: -	SCML2	0.966	-	-	-	0.966	-	-	Mlig455_009757 {REF} {Length: 2536} {Pfam: mbt repeat [PF02820.20, score=136.4]; SAM domain (Sterile alpha motif) [PF00536.32, score=25.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=264, Expect=2e-80]} {Mouse: ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [RH, Score=258, Expect=3e-77]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=242, Expect=2e-71]} {Celegans: WBGene00003041, lin-61, [RH, Score=90.1, Expect=4e-19]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=176, Expect=4e-49]} {RNA1509_29967} {RNA1310_17057.1, RNA1509_29967} {RNA1509_29967, RNA815_24997} Mlig455_070114 {REF} {Length: 4024} {Pfam: mbt repeat [PF02820.20, score=138.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=25.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=266, Expect=3e-81]} {Mouse: ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [RH, Score=257, Expect=4e-77]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=244, Expect=5e-72]} {Celegans: WBGene00003041, lin-61, [RH, Score=92.0, Expect=9e-20]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=177, Expect=9e-50]} {RNA1509_29967} {RNA1310_17057.1} {RNA815_24997}
7.	MligTC455_52418	120	2.49	Mlig455_050438	Neo: - Age: Up-Down-Down		0.964	-	-	-	0.964	-	-	Mlig455_050438 {REF} {Length: 2535} {RNA1310_42173} {RNA815_14655}
8.	MligTC455_20053	174	3.62	Mlig455_034750	Neo: - Age: - Region-enriched R5: 2.122/0.04969		0.961	-	-	-	-	0.961	-	Mlig455_034750 {REF} {Length: 1010} {TRANSSPLICED} {RNA1509_57195} {RNA1310_35663, RNA1509_57195} {RNA1509_57195, RNA815_38287}
9.	MligTC455_45641	460	9.59	Mlig455_044942	Neo: - Age: logFC(26M/2M)=0.242	NFAT5	0.96	-	-	-	0.960	-	-	Mlig455_044942 {REF} {Length: 3006} {Pfam: Rel homology dimerisation domain [PF16179.7, score=44.4]} {Human: ENSG00000102908, NFAT5, nuclear factor of activated T cells 5, [Score=233, Expect=7e-64]} {Mouse: ENSMUSG00000003847, Nfat5, nuclear factor of activated T cells 5, [Score=232, Expect=8e-64]} {Dmel: FBgn0030505, NFAT, NFAT nuclear factor, [Score=197, Expect=1e-54]} {Smed: dd_Smed_v6_5978_0_1, dd_Smed_v6_5978_0_1, [Score=226, Expect=6e-63]} {RNA1509_28577} {RNA1310_10750, RNA1509_28577} {RNA1509_28577, RNA815_11298}
10.	MligTC455_37469	791	16.47	Mlig455_002899	Neo: - Age: Up-Down-Up Regeneration-upregulated R5: 1.641 Regeneration-enriched R5: 1.641	SPTBN1	0.958	-	-	-	-	0.958	-	Mlig455_002899 {REF} {Length: 15751} {Pfam: Spectrin repeat [PF00435.23, score=233.8]; Calponin homology (CH) domain [PF00307.33, score=126.1]; SH3 domain [PF00018.30, score=34.4]; CAMSAP CH domain [PF11971.10, score=27.4]; Variant SH3 domain [PF14604.8, score=23.4]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=394, Expect=2e-109]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=394, Expect=1e-109]} {Dmel: FBgn0004167, kst, karst, [Score=474, Expect=1e-133]} {Celegans: WBGene00004855, sma-1, Beta chain spectrin homolog Sma1; SMAll, [Score=404, Expect=3e-112]} {Smed: dd_Smed_v6_2514_0_1, dd_Smed_v6_2514_0_1, [Score=635, Expect=0.0]} {RNA1509_1055, RNA1509_39466, RNA1509_39938, RNA1509_48671} {RNA1310_51.1, RNA1509_1055, RNA1509_39466, RNA1509_39938, RNA1509_48671} {RNA1509_1055, RNA1509_39466, RNA1509_39938, RNA1509_48671, RNA815_21.1}
11.	MligTC455_21990	54	1.13	Mlig455_024880	Neo: - Age: -	SLC25A51	0.956	-	-	-	0.956	-	-	Mlig455_024880 {REF} {Length: 1877} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=106.6]} {Human: ENSG00000122696, SLC25A51, solute carrier family 25 member 51, [Score=187, Expect=2e-56]} {Mouse: ENSMUSG00000045973, Slc25a51, solute carrier family 25, member 51, [Score=189, Expect=3e-57]} {Dmel: FBgn0039741, CG7943, [Score=173, Expect=3e-51]} {Celegans: WBGene00011858, T20D3.5, [Score=114, Expect=6e-30]} {Smed: dd_Smed_v6_8610_0_1, dd_Smed_v6_8610_0_1, [Score=184, Expect=5e-56]} {RNA1509_18045} {RNA1310_1889.1} {RNA815_20900}
12.	MligTC455_29648	368	7.67	Mlig455_020120, Mlig455_022315	Neo: - Age: Up-Down-Up	SLC25A27	0.954	-	-	-	-	0.954	-	Mlig455_020120 {REF} {Length: 2510} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=198.8]} {Human: ENSG00000153291, SLC25A27, solute carrier family 25 member 27, [RH, Score=320, Expect=1e-108]} {Mouse: ENSMUSG00000023912, Slc25a27, solute carrier family 25, member 27, [RH, Score=320, Expect=6e-109]} {Dmel: FBgn0030872, Ucp4A, [RH, Score=319, Expect=2e-108]} {Celegans: WBGene00006729, ucp-4, UnCoupling Protein (Mitochondrial substrate carrier), [RH, Score=289, Expect=5e-97]} {Smed: dd_Smed_v6_3596_0_1, dd_Smed_v6_3596_0_1, [Score=150, Expect=5e-43]} {RNA1509_37248} {RNA1310_7285.1} {RNA815_10639} Mlig455_022315 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=199.1]} {Human: ENSG00000153291, SLC25A27, solute carrier family 25 member 27, [RH, Score=320, Expect=1e-108]} {Mouse: ENSMUSG00000023912, Slc25a27, solute carrier family 25, member 27, [RH, Score=320, Expect=6e-109]} {Dmel: FBgn0030872, Ucp4A, [RH, Score=320, Expect=5e-109]} {Celegans: WBGene00006729, ucp-4, UnCoupling Protein (Mitochondrial substrate carrier), [RH, Score=289, Expect=4e-97]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [Score=149, Expect=5e-43]} {RNA1509_37248} {RNA1310_7285.1} {RNA815_10639}
13.	MligTC455_35787	665	13.85	Mlig455_067247	Neo: - Age: Up-Up-Down	AASS	0.953	-	-	-	-	0.953	-	Mlig455_067247 {REF} {Length: 2195} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=69.8]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=127, Expect=1e-31]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=134, Expect=2e-33]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=129, Expect=4e-32]} {Celegans: WBGene00019819, R02D3.1, [Score=126, Expect=4e-31]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=147, Expect=2e-38]} {RNA1509_36226} {RNA1310_22293} {RNA815_9197.1}
14.	MligTC455_38007	1041	21.68	Mlig455_056971	Neo: Neoblast Age: Down-Down-Up	NOP2	0.953	-	-	-	0.953	-	-	Mlig455_056971 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: 16S rRNA methyltransferase RsmB/F [PF01189.19, score=244.4]; N-terminal domain of 16S rRNA methyltransferase RsmF [PF17125.7, score=34.0]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=25.8]; FtsJ-like methyltransferase [PF01728.21, score=23.3]; Methyltransferase domain [PF13847.8, score=20.9]; Met-10+ like-protein [PF02475.18, score=19.9]} {Human: ENSG00000111641, NOP2, NOP2 nucleolar protein, [RH, Score=469, Expect=4e-156]} {Mouse: ENSMUSG00000038279, Nop2, NOP2 nucleolar protein, [RH, Score=461, Expect=2e-153]} {Dmel: FBgn0033741, CG8545, [RH, Score=426, Expect=1e-138]} {Celegans: WBGene00021073, nol-1, NucleOLar protein, [RH, Score=392, Expect=2e-128]} {Smed: dd_Smed_v6_7417_0_1, dd_Smed_v6_7417_0_1, [RH, Score=397, Expect=4e-132]} {RNA1509_25023, RNA1509_31185} {RNA1310_9187.2, RNA1509_25023, RNA1509_31185} {RNA1509_25023, RNA1509_31185, RNA815_3009.1}

Berezikov Lab - 2020-2021 © ERIBA