Data search
Results for MligTC455_48801
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48801 | 537 | 11.18 | Mlig455_054489 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.685 Region-enriched R5: 1.314/0.00537 |
Mlig455_054489 {REF} {Length: 1148} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YagE family COG1723 [PF02582.16, score=105.1]} {Dmel: FBgn0030678, CG11679, [RH, Score=136, Expect=1e-36]} {Celegans: WBGene00014176, ZK1010.2, [RH, Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8446_0_2, dd_Smed_v6_8446_0_2, [RH, Score=95.9, Expect=2e-22]} {RNA1509_19052} {RNA1310_16765} {RNA815_13720} |
Cumulative graph for MligTC455_48801
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.469 | 3.877 | 0.67096 | 1.00000 | |
| RegionR2 | -0.243 | 3.877 | 0.66627 | 0.99637 | |
| RegionR3 | 0.149 | 3.877 | 0.73756 | 1.00000 | |
| RegionR4 | 0.573 | 3.877 | 0.24272 | 0.54040 | |
| RegionR5 | 1.314 | 3.877 | 0.00044 | 0.00537 | |
| RegionR6 | 0.39 | 3.877 | 0.38207 | 0.96129 | |
| RegionR7 | -1.046 | 3.877 | 0.12562 | 0.66777 | |
| RegionR8 | -1.608 | 3.877 | 0.08004 | 0.53786 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.416 | 3.877 | 0.05662 | 0.71731 | |
| RegenerationR2 | 0.107 | 3.877 | 0.82038 | 0.99538 | |
| RegenerationR3 | 0.264 | 3.877 | 0.59040 | 0.90383 | |
| RegenerationR4 | -0.218 | 3.877 | 0.66119 | 0.93854 | |
| RegenerationR5 | -0.498 | 3.877 | 0.25413 | 0.68709 | |
| RegenerationR6 | -0.27 | 3.877 | 0.58648 | 0.86150 | |
| RegenerationBL | 1.685 | 3.877 | 0.00317 | 0.04865 | |
| RegenerationTP | 0.011 | 3.877 | 0.98770 | 1.00000 |
Genes with expression patterns similar to MligTC455_48801
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48801 | 537 | 11.18 | Mlig455_054489 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.685 Region-enriched R5: 1.314/0.00537 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054489 {REF} {Length: 1148} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YagE family COG1723 [PF02582.16, score=105.1]} {Dmel: FBgn0030678, CG11679, [RH, Score=136, Expect=1e-36]} {Celegans: WBGene00014176, ZK1010.2, [RH, Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8446_0_2, dd_Smed_v6_8446_0_2, [RH, Score=95.9, Expect=2e-22]} {RNA1509_19052} {RNA1310_16765} {RNA815_13720} | |
| 2. | MligTC455_44984 | 885 | 18.43 | Mlig455_011032 | Neo: - Age: Up-Down-Up Region-enriched R5: 1.312/0.00044 |
USO1 | 2.604 | - | 0.821 | 0.833 | - | - | 0.950 | Mlig455_011032 {REF} {Length: 3902} {Pfam: Uso1 / p115 like vesicle tethering protein, head region [PF04869.16, score=138.8]; Armadillo tether-repeat of vescicular transport factor [PF18770.3, score=90.5]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=36.1]; Initiation control protein YabA [PF06156.15, score=23.8]; Homeobox associated leucine zipper [PF02183.20, score=20.5]} {Human: ENSG00000138768, USO1, USO1 vesicle transport factor, [RH, Score=624, Expect=0.0]} {Mouse: ENSMUSG00000029407, Uso1, USO1 vesicle docking factor, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0040087, p115, [RH, Score=513, Expect=1e-168]} {Celegans: WBGene00010713, uso-1, USO1 (Yeast transport protein) homolog, [RH, Score=415, Expect=1e-130]} {Smed: dd_Smed_v6_7694_0_1, dd_Smed_v6_7694_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_4920} {RNA1310_5117.1} {RNA815_6241} |
| 3. | MligTC455_23840 | 421 | 8.78 | Mlig455_022906 | Neo: - Age: - |
1.743 | - | - | - | - | 0.791 | 0.952 | Mlig455_022906 {REF} {Length: 4155} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=26.8]} {RNA1509_28157, RNA1509_53765} {RNA1310_21290.1, RNA1509_28157, RNA1509_53765} {RNA1509_28157, RNA1509_53765, RNA815_11133} | |
| 4. | MligTC455_49604 | 546 | 11.37 | Mlig455_029297 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.705 Region-enriched R4: 2.151/0.00000 Regeneration-downregulated R4: -1.530 Regeneration-depleted R4: -1.530 |
PTPN1 | 1.739 | - | - | - | 0.957 | - | 0.782 | Mlig455_029297 {REF} {Length: 4363} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=194.9]} {Human: ENSG00000196396, PTPN1, protein tyrosine phosphatase, non-receptor type 1, [RH, Score=266, Expect=3e-82]} {Mouse: ENSMUSG00000027540, Ptpn1, protein tyrosine phosphatase, non-receptor type 1, [RH, Score=267, Expect=7e-83]} {Dmel: FBgn0267487, Ptp61F, Protein tyrosine phosphatase 61F, [RH, Score=250, Expect=3e-75]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=159, Expect=7e-43]} {Smed: dd_Smed_v6_5710_0_1, dd_Smed_v6_5710_0_1, [RH, Score=227, Expect=2e-67]} {RNA1509_4241} {RNA1310_5562} {RNA815_1820} |
| 5. | MligTC455_53135 | 1461 | 30.44 | Mlig455_013553 | Neo: Neoblast Age: - Region-enriched R5: 1.811/0.00000 |
NOC4L | 1.671 | - | - | 0.957 | - | 0.714 | - | Mlig455_013553 {REF} {Length: 1473} {TRANSSPLICED} {Pfam: CBF/Mak21 family [PF03914.19, score=57.0]} {Human: ENSG00000184967, NOC4L, nucleolar complex associated 4 homolog, [RH, Score=122, Expect=9e-30]} {Mouse: ENSMUSG00000033294, Noc4l, NOC4 like, [RH, Score=117, Expect=3e-28]} {Dmel: FBgn0029672, CG2875, [RH, Score=97.1, Expect=2e-21]} {Celegans: WBGene00020601, T20B12.3, [RH, Score=92.8, Expect=4e-20]} {RNA1509_56850} {RNA1310_14189.2} {RNA815_9126} |
| 6. | MligTC455_44014 | 525 | 10.94 | Mlig455_055228 | Neo: Int S/G2/M Age: Down-Up-Up |
U2SURP | 0.974 | - | - | - | - | - | 0.974 | Mlig455_055228 {REF} {Length: 2648} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=51.3]; CID domain [PF04818.15, score=46.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=45.7]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000163714, U2SURP, U2 snRNP associated SURP domain containing, [RH, Score=407, Expect=2e-127]} {Mouse: ENSMUSG00000032407, U2surp, U2 snRNP-associated SURP domain containing, [RH, Score=409, Expect=4e-128]} {Dmel: FBgn0034572, CG9346, [RH, Score=379, Expect=9e-118]} {Celegans: WBGene00015581, C07H6.4, [RH, Score=315, Expect=4e-94]} {Smed: dd_Smed_v6_3029_0_1, dd_Smed_v6_3029_0_1, [RH, Score=476, Expect=2e-155]} {RNA1509_14951} {RNA1310_6191, RNA1509_14951} {RNA1509_14951, RNA815_1206.1} |
| 7. | MligTC455_11917 | 392 | 8.16 | Mlig455_036149 | Neo: - Age: - Region-enriched R5: 1.409/0.03123 |
ZDHHC20 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_036149 {REF} {Length: 2425} {Human: ENSG00000180776, ZDHHC20, zinc finger DHHC-type containing 20, [Score=83.2, Expect=4e-19]; ENSG00000104219, ZDHHC2, zinc finger DHHC-type containing 2, [Score=80.9, Expect=3e-18]; ENSG00000102383, ZDHHC15, zinc finger DHHC-type containing 15, [Score=79.3, Expect=1e-17]} {Mouse: ENSMUSG00000039470, Zdhhc2, zinc finger, DHHC domain containing 2, [Score=82.8, Expect=4e-19]} {Dmel: FBgn0033474, CG1407, [Score=110, Expect=4e-29]} {Celegans: WBGene00014075, dhhc-4, Zinc finger DHHC domain-containing protein 4, [Score=62.8, Expect=4e-12]} {Smed: dd_Smed_v6_6233_0_2, dd_Smed_v6_6233_0_2, [Score=92.8, Expect=1e-24]} {RNA1509_34679, RNA1509_7705} {RNA1310_6792.1, RNA1509_34679} {RNA1509_34679, RNA815_2390.1} |
| 8. | MligTC455_18120 | 1732 | 36.09 | Mlig455_028478, Mlig455_028503 | Neo: - Age: - Regeneration-upregulated BL: 1.769 Regeneration-enriched BL: 1.769 |
CHID1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_028478 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=68.6]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=322, Expect=3e-107]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=328, Expect=6e-110]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=203, Expect=9e-62]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_36132} {RNA1310_15503} {RNA815_6271.1} Mlig455_028503 {REF} {Length: 1790} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=67.1]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=325, Expect=2e-108]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=332, Expect=3e-111]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=201, Expect=4e-61]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_25390, RNA1509_36132} {RNA1310_15503, RNA1509_25390, RNA1509_36132} {RNA1509_25390, RNA1509_36132, RNA815_6271.1} |
| 9. | MligTC455_22523 | 371 | 7.72 | Mlig455_016487 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.393 Region-enriched R5: 1.601/0.00693 |
SERP2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_016487 {REF} {Length: 1151} {Pfam: Ribosome associated membrane protein RAMP4 [PF06624.14, score=85.9]} {Human: ENSG00000151778, SERP2, stress associated endoplasmic reticulum protein family member 2, [Score=86.3, Expect=8e-24]} {Mouse: ENSMUSG00000052584, Serp2, stress-associated endoplasmic reticulum protein family member 2, [Score=86.3, Expect=5e-24]} {Dmel: FBgn0047135, CG32276, [RH, Score=90.1, Expect=9e-26]} {Celegans: WBGene00020374, T09A12.5, [RH, Score=86.7, Expect=2e-24]} {Smed: dd_Smed_v6_304_0_1, dd_Smed_v6_304_0_1, [Score=103, Expect=4e-31]} {RNA1509_1606, RNA1509_2348, RNA1509_27169} {RNA1310_17031, RNA1509_1606, RNA1509_2348, RNA1509_27169} {RNA1509_1606, RNA1509_2348, RNA1509_27169, RNA815_9261.1} |
| 10. | MligTC455_33025 | 556 | 11.58 | Mlig455_019033 | Neo: - Age: - Region-enriched R4: 1.637/0.00769 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_019033 {REF} {Length: 2109} {Smed: dd_Smed_v6_565_0_1, dd_Smed_v6_565_0_1, [RH, Score=50.8, Expect=5e-08]} {RNA1509_26468, RNA1509_30296} {RNA1310_14936.1, RNA1509_30296} {RNA1509_30296, RNA815_27879} | |
| 11. | MligTC455_35394 | 477 | 9.94 | Mlig455_046493 | Neo: - Age: - |
AMPD2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_046493 {REF} {Length: 4415} {TRANSSPLICED} {Pfam: AMP deaminase [PF19326.1, score=905.1]; Adenosine deaminase [PF00962.24, score=47.7]} {Human: ENSG00000116337, AMPD2, adenosine monophosphate deaminase 2, [RH, Score=790, Expect=0.0]} {Mouse: ENSMUSG00000027889, Ampd2, adenosine monophosphate deaminase 2, [RH, Score=789, Expect=0.0]} {Dmel: FBgn0052626, AMPdeam, AMP deaminase, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00016415, ampd-1, AMP deaminase, [RH, Score=711, Expect=0.0]} {Smed: dd_Smed_v6_9436_0_2, dd_Smed_v6_9436_0_2, [RH, Score=716, Expect=0.0]} {RNA1509_29268, RNA1509_47517, RNA1509_5825} {RNA1310_7860.1, RNA1509_29268, RNA1509_47517, RNA1509_5825} {RNA1509_29268, RNA1509_47517, RNA1509_5825, RNA815_2451} |
| 12. | MligTC455_34664 | 569 | 11.86 | Mlig455_034486 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.369/0.02575 |
TDRD15 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_034486 {REF} {Length: 3265} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=143.2]; SGF29 tudor-like domain [PF07039.13, score=25.5]; Survival motor neuron protein (SMN) [PF06003.14, score=22.8]; Domain of unknown function (DUF4537) [PF15057.8, score=22.4]; Tumour suppressor p53-binding protein-1 Tudor [PF09038.12, score=20.7]} {Human: ENSG00000218819, TDRD15, tudor domain containing 15, [RH, Score=53.1, Expect=2e-06]} {Mouse: ENSMUSG00000000365, Rnf17, ring finger protein 17, [Score=52.4, Expect=3e-06]} {Dmel: FBgn0003891, tud, tudor, [RH, Score=76.6, Expect=8e-14]} {Smed: dd_Smed_v6_1582_0_1, dd_Smed_v6_1582_0_1, [RH, Score=62.0, Expect=1e-09]} {RNA1509_17202, RNA1509_41217} {RNA1310_4310.2, RNA1509_17202, RNA1509_41217} {RNA1509_17202, RNA1509_41217, RNA815_2942} |
| 13. | MligTC455_27962 | 528 | 11 | Mlig455_033837 | Neo: Irradiation Age: Up-Down-Down |
MYO18A | 0.951 | - | - | - | - | - | 0.951 | Mlig455_033837 {REF} {Length: 7232} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=303.8]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=20.3]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=877, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=365, Expect=5e-102]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_2680} {RNA1310_390} {RNA815_386} |
| 14. | MligTC455_09980 | 582 | 12.13 | Mlig455_008708, Mlig455_046919 | Neo: Irradiation Age: - Region-enriched R4: 2.173/0.00113 Regeneration-upregulated BL: 2.727 Regeneration-enriched BL: 2.727 |
UCK2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_008708 {REF} {Length: 3535} {Pfam: Phosphoribulokinase / Uridine kinase family [PF00485.20, score=124.5]} {Human: ENSG00000143179, UCK2, uridine-cytidine kinase 2, [Score=212, Expect=3e-68]; ENSG00000130717, UCK1, uridine-cytidine kinase 1, [Score=204, Expect=6e-65]} {Mouse: ENSMUSG00000026558, Uck2, uridine-cytidine kinase 2, [Score=207, Expect=2e-66]; ENSMUSG00000002550, Uck1, uridine-cytidine kinase 1, [Score=202, Expect=3e-64]} {Dmel: FBgn0263398, CG6364, [Score=209, Expect=3e-67]} {Celegans: WBGene00007089, B0001.4, Probable uridine-cytidine kinase, [Score=176, Expect=2e-54]} {Smed: dd_Smed_v6_5820_0_1, dd_Smed_v6_5820_0_1, [RH, Score=185, Expect=4e-58]} {RNA1509_46903} {RNA1310_33017} {RNA815_21924.1} Mlig455_046919 {REF} {Length: 3723} {Pfam: Phosphoribulokinase / Uridine kinase family [PF00485.20, score=124.5]} {Human: ENSG00000143179, UCK2, uridine-cytidine kinase 2, [Score=212, Expect=3e-68]; ENSG00000130717, UCK1, uridine-cytidine kinase 1, [Score=204, Expect=6e-65]} {Mouse: ENSMUSG00000026558, Uck2, uridine-cytidine kinase 2, [Score=207, Expect=2e-66]; ENSMUSG00000002550, Uck1, uridine-cytidine kinase 1, [Score=202, Expect=3e-64]} {Dmel: FBgn0263398, CG6364, [Score=209, Expect=3e-67]} {Celegans: WBGene00007089, B0001.4, Probable uridine-cytidine kinase, [Score=176, Expect=2e-54]} {Smed: dd_Smed_v6_5820_0_1, dd_Smed_v6_5820_0_1, [RH, Score=185, Expect=4e-58]} {RNA1509_46903} {RNA1310_33017, RNA1509_46903} {RNA1509_46903, RNA815_21924.1} |
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