Data search
Results for MligTC455_18676
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18676 | 24 | 0.50 | Mlig455_018143, Mlig455_056919 | Neo: - Age: - |
Mlig455_018143 {REF} {Length: 569} {RNA1509_2129} {RNA1310_82423} {RNA815_43981} Mlig455_056919 {REF} {Length: 119} {NoTransDecoderORF} {RNA1310_82423} {RNA815_43981} |
Cumulative graph for MligTC455_18676
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.353 | 0.85 | 1.00000 | 1.00000 | |
| RegionR2 | -2.114 | 0.85 | 0.99983 | 1.00000 | |
| RegionR3 | -0.548 | 0.85 | 0.55937 | 1.00000 | |
| RegionR4 | 3.144 | 0.85 | 0.66143 | 0.96084 | |
| RegionR5 | -0.905 | 0.85 | 0.98444 | 1.00000 | |
| RegionR6 | 1.231 | 0.85 | 0.74603 | 1.00000 | |
| RegionR7 | 1.911 | 0.85 | 0.99887 | 1.00000 | |
| RegionR8 | -3.072 | 0.85 | 0.99987 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.152 | 0.85 | 0.99996 | 1.00000 | |
| RegenerationR2 | 1.318 | 0.85 | 0.99981 | 1.00000 | |
| RegenerationR3 | 0.63 | 0.85 | 0.27885 | 0.71188 | |
| RegenerationR4 | -0.892 | 0.85 | 0.43835 | 0.83588 | |
| RegenerationR5 | 1.151 | 0.85 | 0.19833 | 0.63057 | |
| RegenerationR6 | -1.78 | 0.85 | 1.00000 | 1.00000 | |
| RegenerationBL | 0.09 | 0.85 | 1.00000 | 1.00000 | |
| RegenerationTP | -1.344 | 0.85 | 1.00000 | 1.00000 |
Genes with expression patterns similar to MligTC455_18676
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18676 | 24 | 0.5 | Mlig455_018143, Mlig455_056919 | Neo: - Age: - |
3 | 1.000 | 1.000 | - | - | - | 1.000 | Mlig455_018143 {REF} {Length: 569} {RNA1509_2129} {RNA1310_82423} {RNA815_43981} Mlig455_056919 {REF} {Length: 119} {NoTransDecoderORF} {RNA1310_82423} {RNA815_43981} |
|
| 2. | MligTC455_36179 | 838 | 17.46 | Mlig455_012503 | Neo: - |
PLB1 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_012503 {REF} {Length: 2217} {Pfam: GDSL-like Lipase/Acylhydrolase [PF00657.24, score=76.8]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=39.4]} {Human: ENSG00000163803, PLB1, phospholipase B1, [RH, Score=294, Expect=2e-88]} {Mouse: ENSMUSG00000029134, Plb1, phospholipase B1, [RH, Score=309, Expect=8e-94]} {Dmel: FBgn0036939, CG7365, [Score=239, Expect=1e-74]} {Celegans: WBGene00022256, Y73B6BL.37, [RH, Score=245, Expect=1e-77]} {Smed: dd_Smed_v6_2690_0_1, dd_Smed_v6_2690_0_1, [Score=232, Expect=3e-72]} {RNA1509_30374, RNA1509_35882, RNA1509_40981} {RNA1310_16463, RNA1509_30374, RNA1509_35882, RNA1509_40981} {RNA1509_30374, RNA1509_35882, RNA1509_40981, RNA815_8760} |
| 3. | MligTC455_36060 | 69 | 1.45 | Mlig455_056811 | Neo: - Age: Up-Down-Down |
0.961 | - | - | - | - | - | 0.961 | Mlig455_056811 {REF} {Length: 2647} {Pfam: HEPN domain [PF05168.16, score=26.2]} {RNA1509_29577} {RNA1310_37309.1} {RNA815_5901.1} | |
| 4. | MligTC455_42218 | 241 | 5.03 | Mlig455_040328 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.322 Region-specific R4: 4.530 Region-enriched R4: 3.510/0.00006 |
SLC51A | 0.956 | - | - | - | - | - | 0.956 | Mlig455_040328 {REF} {Length: 2789} {Pfam: Organic solute transporter Ostalpha [PF03619.18, score=110.0]} {Human: ENSG00000163959, SLC51A, solute carrier family 51 alpha subunit, [RH, Score=55.5, Expect=4e-08]} {Mouse: ENSMUSG00000035699, Slc51a, solute carrier family 51, alpha subunit, [RH, Score=60.1, Expect=9e-10]} {Celegans: WBGene00012182, osta-3, Organic solute transporter alpha-like protein 3, [RH, Score=98.6, Expect=3e-23]} {Smed: dd_Smed_v6_3881_1_1, dd_Smed_v6_3881_1_1, [Score=46.6, Expect=1e-05]} {RNA1509_16927, RNA1509_59518} {RNA1310_16316, RNA1509_16927, RNA1509_59518} {RNA1509_16927, RNA1509_59518, RNA815_9480.1} |
| 5. | MligTC455_03124 | 8 | 0.17 | Mlig455_052005 | Neo: - Age: - |
0.955 | - | 0.955 | - | - | - | - | Mlig455_052005 {REF} {Length: 598} {NoTransDecoderORF} {RNA1509_56084} {RNA1310_67138} {RNA815_60226} | |
| 6. | MligTC455_11054 | 3 | 0.06 | Mlig455_021174 | Neo: - Age: - |
ZFP36L1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_021174 {REF} {Length: 614} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=58.8]; Zinc finger domain [PF18345.3, score=35.7]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.0]; CCCH-type zinc finger [PF18044.3, score=28.1]} {Human: ENSG00000185650, ZFP36L1, ZFP36 ring finger protein like 1, [Score=67.8, Expect=2e-14]; ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [Score=66.2, Expect=9e-14]} {Mouse: ENSMUSG00000059334, Zfp36l3, zinc finger protein 36, C3H type-like 3, [Score=69.7, Expect=4e-15]; ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=68.6, Expect=7e-15]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [Score=69.3, Expect=4e-15]} {Celegans: WBGene00007961, C35D6.4, [RH, Score=66.6, Expect=6e-15]} {RNA1310_91211} {RNA815_52611} |
| 7. | MligTC455_15333 | 618 | 12.86 | Mlig455_004406, Mlig455_037227 | Neo: - Age: - |
PDZRN3, TRIM65 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_004406 {REF} {Length: 2142} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=34.7]; RING-type zinc-finger [PF13445.8, score=28.1]; Ring finger domain [PF13639.8, score=27.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=25.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.5]; zinc-RING finger domain [PF14634.8, score=20.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {Human: ENSG00000141569, TRIM65, tripartite motif containing 65, [RH, Score=72.4, Expect=1e-13]} {Mouse: ENSMUSG00000035357, Pdzrn3, PDZ domain containing RING finger 3, [Score=58.5, Expect=6e-09]; ENSMUSG00000035235, Trim13, tripartite motif-containing 13, [Score=57.0, Expect=1e-08]; ENSMUSG00000054517, Trim65, tripartite motif-containing 65, [Score=56.6, Expect=2e-08]} {Dmel: FBgn0020224, Cbl, Cbl proto-oncogene, [Score=50.1, Expect=2e-06]} {Celegans: WBGene00004829, sli-1, Sli-1 protein; Suppressor of LIneage defect, [Score=50.1, Expect=1e-06]} {Smed: dd_Smed_v6_14782_0_2, dd_Smed_v6_14782_0_2, [Score=45.8, Expect=1e-05]} {RNA1509_55221} {RNA1310_21941.1} {RNA815_9209} Mlig455_037227 {REF} {Length: 2155} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.2]; RING-type zinc-finger [PF13445.8, score=29.7]; Ring finger domain [PF13639.8, score=28.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=25.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.9]; zinc-RING finger domain [PF14634.8, score=21.2]; Prokaryotic RING finger family 4 [PF14447.8, score=20.4]} {Human: ENSG00000121440, PDZRN3, PDZ domain containing ring finger 3, [Score=59.7, Expect=1e-09]} {Mouse: ENSMUSG00000035357, Pdzrn3, PDZ domain containing RING finger 3, [Score=59.7, Expect=9e-10]} {Dmel: FBgn0020224, Cbl, Cbl proto-oncogene, [Score=49.3, Expect=2e-06]} {Celegans: WBGene00004829, sli-1, Sli-1 protein; Suppressor of LIneage defect, [Score=49.3, Expect=1e-06]} {RNA1509_55221} {RNA1310_21941.1} {RNA815_9209} |
| 8. | MligTC455_37990 | 53 | 1.11 | Mlig455_008621 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_008621 {REF} {Length: 2347} {Pfam: EF-hand domain pair [PF13499.8, score=32.3]; EF-hand domain [PF13405.8, score=26.8]; EF hand [PF00036.34, score=25.2]; EF hand [PF13202.8, score=19.4]; EF-hand domain pair [PF13833.8, score=19.2]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [Score=78.6, Expect=3e-17]} {RNA1310_31713.1} {RNA815_36423} | |
| 9. | MligTC455_25325 | 264 | 5.5 | Mlig455_060516 | Neo: - Age: logFC(26M/2M)=-0.593 Region-enriched R3: 3.266/0.00002 |
MYRF | 0.953 | - | - | - | - | - | 0.953 | Mlig455_060516 {REF} {Length: 3746} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=59.4]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=25.1]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=241, Expect=1e-65]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=236, Expect=2e-64]} {Dmel: FBgn0034985, CG3328, [Score=235, Expect=2e-63]} {Celegans: WBGene00008999, myrf-2, Myelin regulatory factor related, [RH, Score=156, Expect=9e-39]} {RNA1509_20418} {RNA1310_4590.2, RNA1509_20418} {RNA1509_20418, RNA815_1404} |
| 10. | MligTC455_12355 | 27 | 0.56 | Mlig455_024618 | Neo: - Age: - |
CHRNA3 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_024618 {REF} {Length: 2865} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=270.1]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=246.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [RH, Score=432, Expect=7e-146]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [RH, Score=432, Expect=5e-146]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [RH, Score=419, Expect=1e-140]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [RH, Score=427, Expect=6e-144]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [RH, Score=426, Expect=2e-143]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [RH, Score=418, Expect=1e-140]; ENSMUSG00000035200, Chrnb4, cholinergic receptor, nicotinic, beta polypeptide 4, [RH, Score=406, Expect=4e-136]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [RH, Score=524, Expect=0.0]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=459, Expect=4e-157]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [RH, Score=521, Expect=6e-180]} {RNA1509_36802} {RNA1310_50512} {RNA815_3014.1} |
| 11. | MligTC455_31826 | 3263 | 67.98 | Mlig455_047238 | Neo: - Age: logFC(26M/2M)=0.279 Region-enriched R3: 1.778/0.00195 |
CTDSP1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_047238 {REF} {Length: 3089} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=72.1]; VDE lipocalin domain [PF07137.13, score=58.0]} {Human: ENSG00000144579, CTDSP1, CTD small phosphatase 1, [Score=128, Expect=9e-33]} {Mouse: ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [Score=127, Expect=7e-33]} {Dmel: FBgn0036556, CG5830, [Score=120, Expect=1e-29]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [Score=110, Expect=7e-27]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [Score=135, Expect=3e-33]} {RNA1509_13014} {RNA1310_14334.1} {RNA815_7820} |
| 12. | MligTC455_51842 | 25 | 0.53 | Mlig455_023965 | Neo: - Age: - |
0.951 | - | 0.951 | - | - | - | - | Mlig455_023965 {REF} {Length: 983} {RNA1310_64708} {RNA815_46410} | |
| 13. | MligTC455_03424 | 3 | 0.07 | Mlig455_036663 | Neo: - Age: Up-Down-Down |
0.95 | - | 0.950 | - | - | - | - | Mlig455_036663 {REF} {Length: 982} {Pfam: Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=26.8]; Intra-flagellar transport protein 57 [PF10498.11, score=26.5]; Sec34-like family [PF04136.17, score=25.3]; Protein of unknown function (DUF1664) [PF07889.14, score=24.8]; Predicted membrane protein (DUF2106) [PF09879.11, score=22.9]; Domain of unknown function (DUF1970) [PF09301.12, score=21.7]; Initiation control protein YabA [PF06156.15, score=21.6]; Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=17.9]} {Mouse: ENSMUSG00000046056, Sbsn, suprabasin, [RH, Score=71.2, Expect=1e-13]} {RNA1310_65283} {RNA815_56810.1} |
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