TomoSeq data search

Data search

Results for MligTC455_12541

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12541

1229

25.60

Mlig455_037225

Neo: -

Age: -

ZFYVE1

Mlig455_037225 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=89.3]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [RH, Score=547, Expect=0.0]} {Dmel: FBgn0039492, CG6051, [Score=60.1, Expect=5e-09]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [RH, Score=387, Expect=5e-125]} {RNA1509_11257, RNA1509_55322} {RNA1310_5567, RNA1509_11257, RNA1509_55322} {RNA1509_11257, RNA1509_55322, RNA815_840.1}

Cumulative graph for MligTC455_12541

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.466	4.745	0.56900	1.00000
RegionR2	0.097	4.745	0.83986	1.00000
RegionR3	-0.121	4.745	0.76493	1.00000
RegionR4	-0.559	4.745	0.20927	0.49338
RegionR5	0.555	4.745	0.12229	0.35122
RegionR6	-0.038	4.745	0.92468	1.00000
RegionR7	0.037	4.745	0.93618	1.00000
RegionR8	0.494	4.745	0.33108	0.96430

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.341	4.745	0.28518	0.98385
RegenerationR2	-0.272	4.745	0.56411	0.90040
RegenerationR3	-0.004	4.745	0.99284	1.00000
RegenerationR4	-0.191	4.745	0.69415	0.95131
RegenerationR5	-0.305	4.745	0.50686	0.86206
RegenerationR6	0.191	4.745	0.69314	0.92065
RegenerationBL	-0.388	4.745	0.43376	0.80226
RegenerationTP	-0.301	4.745	0.57383	0.94650

Genes with expression patterns similar to MligTC455_12541

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12541	1229	25.6	Mlig455_037225	Neo: - Age: -	ZFYVE1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037225 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=89.3]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [RH, Score=547, Expect=0.0]} {Dmel: FBgn0039492, CG6051, [Score=60.1, Expect=5e-09]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [RH, Score=387, Expect=5e-125]} {RNA1509_11257, RNA1509_55322} {RNA1310_5567, RNA1509_11257, RNA1509_55322} {RNA1509_11257, RNA1509_55322, RNA815_840.1}
2.	MligTC455_50529	987	20.57	Mlig455_017364	Neo: - Age: Up-Up-Down		1.774	-	-	-	-	0.957	0.817	Mlig455_017364 {REF} {Length: 724} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885}
3.	MligTC455_37443	711	14.81	Mlig455_043503	Neo: - Age: Up-Down-Down	ZFYVE26	1.731	0.781	0.950	-	-	-	-	Mlig455_043503 {REF} {Length: 12553} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=51.6]; Protein of unknown function, DUF547 [PF04784.16, score=39.3]} {Human: ENSG00000072121, ZFYVE26, zinc finger FYVE-type containing 26, [RH, Score=318, Expect=4e-86]} {Mouse: ENSMUSG00000066440, Zfyve26, zinc finger, FYVE domain containing 26, [RH, Score=310, Expect=8e-84]} {Dmel: FBgn0037897, CG5270, [RH, Score=113, Expect=3e-24]} {Celegans: WBGene00014019, ZK632.12, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_7794_0_1, dd_Smed_v6_7794_0_1, [RH, Score=371, Expect=9e-103]} {RNA1509_31972, RNA1509_4458} {RNA1310_277.1, RNA1509_31972, RNA1509_4458} {RNA1509_31972, RNA1509_4458, RNA815_103}
4.	MligTC455_35359	375	7.81	Mlig455_062928	Neo: - Age: Up-Down-Down	SCAP	1.73	-	0.950	-	-	0.780	-	Mlig455_062928 {REF} {Length: 5472} {TRANSSPLICED} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=147.1]; Patched family [PF02460.20, score=59.8]; WD domain, G-beta repeat [PF00400.34, score=28.0]} {Human: ENSG00000114650, SCAP, SREBF chaperone, [RH, Score=364, Expect=8e-106]} {Mouse: ENSMUSG00000032485, Scap, SREBF chaperone, [RH, Score=362, Expect=3e-105]} {Dmel: FBgn0033052, SCAP, SREBP cleavage activating protein, [RH, Score=289, Expect=2e-80]} {Celegans: WBGene00004744, scp-1, SREBP Cleavage activating Protein (SCAP) homolog, [RH, Score=236, Expect=1e-63]} {Smed: dd_Smed_v6_12222_0_1, dd_Smed_v6_12222_0_1, [RH, Score=366, Expect=2e-108]} {RNA1509_25017, RNA1509_28936} {RNA1310_1382.1, RNA1509_25017, RNA1509_28936} {RNA1509_25017, RNA1509_28936, RNA815_1411.1}
5.	MligTC455_22880	496	10.34	Mlig455_046062	Neo: - Age: Down-Up-Up	NAXE	1.707	0.749	0.958	-	-	-	-	Mlig455_046062 {REF} {Length: 978} {TRANSSPLICED} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=138.4]} {Human: ENSG00000163382, NAXE, NAD(P)HX epimerase, [RH, Score=266, Expect=3e-89]} {Mouse: ENSMUSG00000028070, Naxe, NAD(P)HX epimerase, [RH, Score=271, Expect=1e-91]} {Dmel: FBgn0030178, CG2974, [RH, Score=273, Expect=3e-93]} {Celegans: WBGene00012476, Y18D10A.3, NAD(P)H-hydrate epimerase, [RH, Score=218, Expect=8e-70]} {Smed: dd_Smed_v6_9067_0_1, dd_Smed_v6_9067_0_1, [RH, Score=277, Expect=2e-94]} {RNA1509_6958} {RNA1310_36172} {RNA815_17429}
6.	MligTC455_25367	617	12.86	Mlig455_005998	Neo: - Age: logFC(26M/2M)=-0.397 Region-enriched R5: 1.203/0.01149	PCNX1	1.707	0.956	-	-	-	-	0.751	Mlig455_005998 {REF} {Length: 7567} {TRANSSPLICED} {Pfam: Pecanex protein (C-terminus) [PF05041.17, score=277.0]} {Human: ENSG00000100731, PCNX1, pecanex 1, [RH, Score=892, Expect=0.0]} {Mouse: ENSMUSG00000021140, Pcnx, pecanex homolog, [RH, Score=903, Expect=0.0]} {Dmel: FBgn0003048, pcx, pecanex, [RH, Score=521, Expect=5e-150]} {Celegans: WBGene00015237, B0511.12, [RH, Score=699, Expect=0.0]} {Smed: dd_Smed_v6_4696_0_1, dd_Smed_v6_4696_0_1, [RH, Score=737, Expect=0.0]} {RNA1509_30867, RNA1509_3296, RNA1509_47476} {RNA1310_315.1, RNA1509_30867, RNA1509_47476} {RNA1509_30867, RNA1509_47476, RNA815_192}
7.	MligTC455_45828	282	5.88	Mlig455_038865	Neo: - Age: -	AARS2	0.969	-	-	-	-	0.969	-	Mlig455_038865 {REF} {Length: 3448} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=353.7]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=25.5]} {Human: ENSG00000124608, AARS2, alanyl-tRNA synthetase 2, mitochondrial, [Score=421, Expect=2e-130]} {Mouse: ENSMUSG00000023938, Aars2, alanyl-tRNA synthetase 2, mitochondrial, [Score=441, Expect=9e-138]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [Score=409, Expect=3e-126]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [Score=421, Expect=7e-131]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [Score=421, Expect=7e-131]} {RNA1509_11036} {RNA1310_3138.1} {RNA815_933}
8.	MligTC455_24310	169	3.52	Mlig455_044934	Neo: - Age: - Region-enriched R2: 3.442/0.01506	SLC16A12	0.962	-	0.962	-	-	-	-	Mlig455_044934 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=125.7]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [RH, Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [RH, Score=187, Expect=2e-53]} {Dmel: FBgn0033095, CG3409, [Score=138, Expect=1e-34]} {Celegans: WBGene00021227, mct-1, MonoCarboxylate Transporter family, [Score=117, Expect=3e-28]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=123, Expect=3e-30]} {RNA1509_33089} {RNA1310_9979} {RNA815_6321}
9.	MligTC455_29830	621	12.94	Mlig455_030938	Neo: - Age: Up-Up-Down	RPS6KB1	0.962	-	-	-	-	0.962	-	Mlig455_030938 {REF} {Length: 5123} {Pfam: Protein kinase domain [PF00069.27, score=226.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.9]; Protein kinase C terminal domain [PF00433.26, score=32.7]; Kinase-like [PF14531.8, score=21.9]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=19.2]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=494, Expect=2e-171]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=478, Expect=6e-165]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=494, Expect=1e-170]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=467, Expect=1e-160]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [RH, Score=469, Expect=8e-161]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=470, Expect=7e-162]} {RNA1509_14034, RNA1509_25974, RNA1509_33000, RNA1509_7605} {RNA1310_19244, RNA1509_14034, RNA1509_25974, RNA1509_33000} {RNA1509_14034, RNA1509_25974, RNA1509_33000, RNA815_2217.1}
10.	MligTC455_49481	2896	60.33	Mlig455_061474	Neo: - Age: - Regeneration-upregulated BL: 1.088 Regeneration-enriched BL: 1.088	RBM39	0.957	-	-	-	-	0.957	-	Mlig455_061474 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.4]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=59.8]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=365, Expect=2e-119]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=365, Expect=1e-119]} {Dmel: FBgn0031883, Caper, [Score=342, Expect=6e-110]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=259, Expect=2e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=273, Expect=2e-85]} {RNA1509_9704} {RNA1310_3436.2, RNA1509_9704} {RNA1509_9704, RNA815_1081.1}
11.	MligTC455_49480	3325	69.28	Mlig455_061462	Neo: - Age: - Regeneration-upregulated BL: 1.148 Regeneration-enriched BL: 1.148	RBM39	0.953	-	-	-	-	0.953	-	Mlig455_061462 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=136.6]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=60.2]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=363, Expect=1e-118]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=363, Expect=9e-119]} {Dmel: FBgn0031883, Caper, [RH, Score=342, Expect=1e-109]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=258, Expect=6e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=276, Expect=2e-86]} {RNA1509_4239, RNA1509_43417, RNA1509_9704} {RNA1310_3908, RNA1509_4239, RNA1509_43417} {RNA1509_4239, RNA1509_43417, RNA815_1081.1}
12.	MligTC455_28569	166	3.45	Mlig455_027009	Neo: - Age: Down-Up-Up	PNPLA6	0.951	-	0.951	-	-	-	-	Mlig455_027009 {REF} {Length: 3537} {TRANSSPLICED} {Pfam: Patatin-like phospholipase [PF01734.24, score=78.7]} {Human: ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [Score=188, Expect=5e-52]; ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [Score=182, Expect=4e-50]} {Mouse: ENSMUSG00000004565, Pnpla6, patatin-like phospholipase domain containing 6, [Score=185, Expect=4e-51]; ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [Score=183, Expect=1e-50]} {Dmel: FBgn0003656, sws, swiss cheese, [Score=165, Expect=2e-44]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [Score=141, Expect=2e-36]} {Smed: dd_Smed_v6_11184_0_1, dd_Smed_v6_11184_0_1, [Score=194, Expect=2e-54]} {RNA1509_9920} {RNA1310_3751.1} {RNA815_1105}
13.	MligTC455_08357	132	2.76	Mlig455_048179	Neo: - Age: -	CPTP	0.95	-	0.950	-	-	-	-	Mlig455_048179 {REF} {Length: 7247} {Pfam: Glycolipid transfer protein (GLTP) [PF08718.13, score=119.9]} {Human: ENSG00000224051, CPTP, ceramide-1-phosphate transfer protein, [RH, Score=135, Expect=4e-39]} {Mouse: ENSMUSG00000029073, Cptp, ceramide-1-phosphate transfer protein, [RH, Score=134, Expect=1e-38]} {Dmel: FBgn0050392, CG30392, [RH, Score=98.2, Expect=5e-25]} {Celegans: WBGene00018632, tag-296, [RH, Score=109, Expect=7e-29]} {Smed: dd_Smed_v6_4270_0_1, dd_Smed_v6_4270_0_1, [RH, Score=114, Expect=2e-31]} {RNA1509_18178} {RNA1310_20513} {RNA815_20813}
14.	MligTC455_18849	285	5.93	Mlig455_019510	Neo: - Age: -		0.95	-	0.950	-	-	-	-	Mlig455_019510 {REF} {Length: 1502} {TRANSSPLICED} {Pfam: SUZ domain [PF12752.9, score=43.3]} {RNA1509_41034} {RNA1310_40561} {RNA815_9711.1}

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