TomoSeq data search

Data search

Results for MligTC455_25367

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25367

617

12.86

Mlig455_005998

Neo: -

Age: logFC(26M/2M)=-0.397

Region-enriched R5: 1.203/0.01149

PCNX1

Mlig455_005998 {REF} {Length: 7567} {TRANSSPLICED} {Pfam: Pecanex protein (C-terminus) [PF05041.17, score=277.0]} {Human: ENSG00000100731, PCNX1, pecanex 1, [RH, Score=892, Expect=0.0]} {Mouse: ENSMUSG00000021140, Pcnx, pecanex homolog, [RH, Score=903, Expect=0.0]} {Dmel: FBgn0003048, pcx, pecanex, [RH, Score=521, Expect=5e-150]} {Celegans: WBGene00015237, B0511.12, [RH, Score=699, Expect=0.0]} {Smed: dd_Smed_v6_4696_0_1, dd_Smed_v6_4696_0_1, [RH, Score=737, Expect=0.0]} {RNA1509_30867, RNA1509_3296, RNA1509_47476} {RNA1310_315.1, RNA1509_30867, RNA1509_47476} {RNA1509_30867, RNA1509_47476, RNA815_192}

Cumulative graph for MligTC455_25367

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.116	3.936	0.19666	0.83242
RegionR2	-0.615	3.936	0.27283	0.65758
RegionR3	-0.12	3.936	0.80334	1.00000
RegionR4	1.342	3.936	0.00846	0.05383
RegionR5	1.203	3.936	0.00116	0.01149
RegionR6	-0.024	3.936	0.96706	1.00000
RegionR7	-0.012	3.936	0.98946	1.00000
RegionR8	0.341	3.936	0.58164	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.104	3.936	0.64140	1.00000
RegenerationR2	0.286	3.936	0.45769	0.85116
RegenerationR3	-0.296	3.936	0.49389	0.85544
RegenerationR4	-0.118	3.936	0.78560	0.98244
RegenerationR5	-0.214	3.936	0.56579	0.89432
RegenerationR6	0.137	3.936	0.76446	0.95855
RegenerationBL	-0.466	3.936	0.38785	0.75635
RegenerationTP	-1.02	3.936	0.08579	0.46326

Genes with expression patterns similar to MligTC455_25367

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25367	617	12.86	Mlig455_005998	Neo: - Age: logFC(26M/2M)=-0.397 Region-enriched R5: 1.203/0.01149	PCNX1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005998 {REF} {Length: 7567} {TRANSSPLICED} {Pfam: Pecanex protein (C-terminus) [PF05041.17, score=277.0]} {Human: ENSG00000100731, PCNX1, pecanex 1, [RH, Score=892, Expect=0.0]} {Mouse: ENSMUSG00000021140, Pcnx, pecanex homolog, [RH, Score=903, Expect=0.0]} {Dmel: FBgn0003048, pcx, pecanex, [RH, Score=521, Expect=5e-150]} {Celegans: WBGene00015237, B0511.12, [RH, Score=699, Expect=0.0]} {Smed: dd_Smed_v6_4696_0_1, dd_Smed_v6_4696_0_1, [RH, Score=737, Expect=0.0]} {RNA1509_30867, RNA1509_3296, RNA1509_47476} {RNA1310_315.1, RNA1509_30867, RNA1509_47476} {RNA1509_30867, RNA1509_47476, RNA815_192}
2.	MligTC455_15965	1263	26.31	Mlig455_069465	Neo: - Age: logFC(26M/2M)=0.319	HGS	1.732	-	-	0.776	0.956	-	-	Mlig455_069465 {REF} {Length: 3297} {Pfam: VHS domain [PF00790.21, score=124.0]; Hepatocyte growth factor-regulated tyrosine kinase substrate [PF12210.10, score=102.3]; FYVE zinc finger [PF01363.23, score=64.5]} {Human: ENSG00000185359, HGS, hepatocyte growth factor-regulated tyrosine kinase substrate, [RH, Score=454, Expect=8e-149]} {Mouse: ENSMUSG00000116045, Hgs, HGF-regulated tyrosine kinase substrate, [RH, Score=458, Expect=3e-150]; ENSMUSG00000025793, Hgs, HGF-regulated tyrosine kinase substrate, [RH, Score=449, Expect=4e-147]} {Dmel: FBgn0031450, Hrs, Hepatocyte growth factor regulated tyrosine kinase substrate, [RH, Score=256, Expect=3e-75]} {Celegans: WBGene00004101, hgrs-1, Hepatocyte Growth factor-Regulated TK Substrate (HRS) family, [RH, Score=312, Expect=2e-95]} {Smed: dd_Smed_v6_3184_0_2, dd_Smed_v6_3184_0_2, [RH, Score=491, Expect=3e-166]} {RNA1509_2594, RNA1509_47228} {RNA1310_5654.1, RNA1509_47228} {RNA1509_47228, RNA815_1079.1}
3.	MligTC455_12541	1229	25.6	Mlig455_037225	Neo: - Age: -	ZFYVE1	1.707	0.956	-	-	-	-	0.751	Mlig455_037225 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=89.3]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [RH, Score=547, Expect=0.0]} {Dmel: FBgn0039492, CG6051, [Score=60.1, Expect=5e-09]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [RH, Score=387, Expect=5e-125]} {RNA1509_11257, RNA1509_55322} {RNA1310_5567, RNA1509_11257, RNA1509_55322} {RNA1509_11257, RNA1509_55322, RNA815_840.1}
4.	MligTC455_45379	454	9.46	Mlig455_053374	Neo: - Age: - Region-enriched R5: 2.043/0.00052	RGS7	1.696	0.965	-	0.731	-	-	-	Mlig455_053374 {REF} {Length: 3520} {TRANSSPLICED} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=116.3]; Regulator of G protein signaling domain [PF00615.21, score=95.4]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=53.0]; GGL domain [PF00631.24, score=46.1]} {Human: ENSG00000182901, RGS7, regulator of G protein signaling 7, [RH, Score=392, Expect=2e-131]; ENSG00000182732, RGS6, regulator of G protein signaling 6, [RH, Score=384, Expect=4e-128]} {Mouse: ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [RH, Score=390, Expect=6e-131]; ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [RH, Score=385, Expect=1e-128]} {Dmel: FBgn0024941, RSG7, Regulator of G-protein signaling 7, [RH, Score=460, Expect=3e-156]} {Celegans: WBGene00001179, egl-10, Regulator of G-protein signaling egl-10, [RH, Score=246, Expect=9e-74]} {Smed: dd_Smed_v6_4578_0_1, dd_Smed_v6_4578_0_1, [RH, Score=296, Expect=4e-93]} {RNA1509_21995} {RNA1310_14871, RNA1509_21995} {RNA1509_21995, RNA815_14740}
5.	MligTC455_51875	649	13.52	Mlig455_070117	Neo: - Age: -	INTS1	1.663	-	-	-	0.960	0.703	-	Mlig455_070117 {REF} {Length: 7090} {Pfam: Protein of unknown function (DUF3677) [PF12432.10, score=62.2]} {Human: ENSG00000164880, INTS1, integrator complex subunit 1, [RH, Score=405, Expect=1e-113]} {Mouse: ENSMUSG00000029547, Ints1, integrator complex subunit 1, [RH, Score=405, Expect=8e-114]} {Dmel: FBgn0034964, IntS1, Integrator 1, [RH, Score=345, Expect=1e-95]} {Celegans: WBGene00015499, inst-1, INtegrator complex SubuniT 1 homolog, [RH, Score=72.8, Expect=3e-12]} {Smed: dd_Smed_v6_2322_0_2, dd_Smed_v6_2322_0_2, [RH, Score=161, Expect=2e-39]} {RNA1509_5844} {RNA1310_413.1} {RNA815_1627}
6.	MligTC455_49703	948	19.75	Mlig455_012619, Mlig455_066530	Neo: Int S/G2/M Age: -	KCND3	0.974	-	-	-	0.974	-	-	Mlig455_012619 {REF} {Length: 2258} {Pfam: Ion transport protein [PF00520.33, score=130.5]; BTB/POZ domain [PF02214.24, score=83.7]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=53.8]; Ion channel [PF07885.18, score=51.4]; Domain of unknown function (DUF3399) [PF11879.10, score=38.2]; BTB/POZ domain [PF16017.7, score=28.0]} {Human: ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=699, Expect=0.0]; ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=684, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [Score=682, Expect=0.0]} {Mouse: ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=695, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [Score=688, Expect=0.0]; ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=682, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=705, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=692, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=694, Expect=0.0]} {RNA1509_13822} {RNA1310_11399, RNA1509_13822} {RNA1509_13822, RNA815_3704.1} Mlig455_066530 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=129.8]; BTB/POZ domain [PF02214.24, score=83.6]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=53.7]; Ion channel [PF07885.18, score=50.5]; Domain of unknown function (DUF3399) [PF11879.10, score=37.7]; BTB/POZ domain [PF16017.7, score=28.0]} {Human: ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=699, Expect=0.0]; ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=687, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [Score=685, Expect=0.0]} {Mouse: ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=697, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [Score=690, Expect=0.0]; ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=686, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=709, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=689, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=692, Expect=0.0]} {RNA1509_60079} {RNA1310_11399, RNA1509_60079} {RNA1509_60079, RNA815_3704.1}
7.	MligTC455_17108	1081	22.52	Mlig455_045167	Neo: - Age: logFC(26M/2M)=0.316	RAPGEF1	0.973	-	-	-	-	-	0.973	Mlig455_045167 {REF} {Length: 4776} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=84.9]} {Human: ENSG00000107263, RAPGEF1, Rap guanine nucleotide exchange factor 1, [RH, Score=185, Expect=3e-47]} {Mouse: ENSMUSG00000039844, Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, [RH, Score=187, Expect=6e-48]} {Dmel: FBgn0259228, C3G, C3G guanyl-nucleotide exchange factor, [RH, Score=165, Expect=5e-41]} {Celegans: WBGene00021320, Y34B4A.4, [RH, Score=174, Expect=1e-44]} {Smed: dd_Smed_v6_11351_0_1, dd_Smed_v6_11351_0_1, [RH, Score=128, Expect=2e-30]} {RNA1509_14166, RNA1509_14480} {RNA1310_2752.1, RNA1509_14166, RNA1509_14480} {RNA1509_14166, RNA1509_14480, RNA815_12010.1}
8.	MligTC455_48134	691	14.39	Mlig455_067229	Neo: - Age: -	ZDHHC22	0.967	0.967	-	-	-	-	-	Mlig455_067229 {REF} {Length: 3557} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=86.9]} {Human: ENSG00000177108, ZDHHC22, zinc finger DHHC-type containing 22, [Score=73.9, Expect=9e-15]; ENSG00000174165, ZDHHC24, zinc finger DHHC-type containing 24, [Score=70.9, Expect=1e-13]} {Mouse: ENSMUSG00000006463, Zdhhc24, zinc finger, DHHC domain containing 24, [Score=77.0, Expect=6e-16]; ENSMUSG00000048483, Zdhhc22, zinc finger, DHHC-type containing 22, [Score=75.5, Expect=2e-15]} {Dmel: FBgn0039370, CG4956, [Score=80.1, Expect=4e-17]} {Celegans: WBGene00019344, dhhc-10, Palmitoyltransferase, [Score=85.9, Expect=3e-19]} {Smed: dd_Smed_v6_13359_0_1, dd_Smed_v6_13359_0_1, [Score=95.9, Expect=1e-22]} {RNA1509_37212, RNA1509_45534, RNA1509_56198} {RNA1310_25875, RNA1509_37212, RNA1509_56198} {RNA1509_37212, RNA1509_56198, RNA815_12363}
9.	MligTC455_51962	132	2.75	Mlig455_049906	Neo: - Age: logFC(26M/2M)=-0.874		0.962	0.962	-	-	-	-	-	Mlig455_049906 {REF} {Length: 2198} {TRANSSPLICED} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=31.3]} {Smed: dd_Smed_v6_47836_0_1, dd_Smed_v6_47836_0_1, [Score=43.9, Expect=3e-07]} {RNA1509_36216} {RNA1310_1482.1} {RNA815_10965}
10.	MligTC455_32985	415	8.65	Mlig455_046914	Neo: - Age: Up-Up-Down		0.956	-	-	-	-	0.956	-	Mlig455_046914 {REF} {Length: 2316} {Pfam: Kazal-type serine protease inhibitor domain [PF18434.3, score=47.7]} {RNA1509_16553} {RNA1310_30330.1} {RNA815_16460}
11.	MligTC455_37553	956	19.92	Mlig455_011713	Neo: - Age: logFC(26M/2M)=0.316 Region-enriched R5: 1.567/0.00003 Region-enriched R4: 1.267/0.01529		0.951	0.951	-	-	-	-	-	Mlig455_011713 {REF} {Length: 2306} {TRANSSPLICED} {RNA1509_24750} {RNA1310_22667} {RNA815_17057}

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