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Results for MligTC455_49480

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49480 3325 69.28 Mlig455_061462

Neo: -

Age: -

Regeneration-upregulated BL: 1.148

Regeneration-enriched BL: 1.148

RBM39 Mlig455_061462 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=136.6]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=60.2]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=363, Expect=1e-118]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=363, Expect=9e-119]} {Dmel: FBgn0031883, Caper, [RH, Score=342, Expect=1e-109]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=258, Expect=6e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=276, Expect=2e-86]} {RNA1509_4239, RNA1509_43417, RNA1509_9704} {RNA1310_3908, RNA1509_4239, RNA1509_43417} {RNA1509_4239, RNA1509_43417, RNA815_1081.1}

Cumulative graph for MligTC455_49480

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.665 6.277 0.30708 0.95600
RegionR2 0.216 6.277 0.47589 0.86107
RegionR3 -0.073 6.277 0.77473 1.00000
RegionR4 0.426 6.277 0.14142 0.38479
RegionR5 0.257 6.277 0.26607 0.58933
RegionR6 0.037 6.277 0.88488 1.00000
RegionR7 0.304 6.277 0.30023 0.93506
RegionR8 -0.502 6.277 0.21297 0.81709

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.308 6.277 0.73501 1.00000
RegenerationR2 0.465 6.277 0.08424 0.46579
RegenerationR3 0.457 6.277 0.12049 0.53906
RegenerationR4 0.068 6.277 0.82250 0.99511
RegenerationR5 0.437 6.277 0.11666 0.51365
RegenerationR6 0.881 6.277 0.00220 0.05333
RegenerationBL 1.148 6.277 0.00006 0.00299 Specific for BL: 1.148
RegenerationTP -0.142 6.277 0.69295 1.00000


Genes with expression patterns similar to MligTC455_49480

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49480 3325 69.28 Mlig455_061462

Neo: -

Age: -

Regeneration-upregulated BL: 1.148

Regeneration-enriched BL: 1.148

RBM39 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_061462 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=136.6]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=60.2]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=363, Expect=1e-118]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=363, Expect=9e-119]} {Dmel: FBgn0031883, Caper, [RH, Score=342, Expect=1e-109]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=258, Expect=6e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=276, Expect=2e-86]} {RNA1509_4239, RNA1509_43417, RNA1509_9704} {RNA1310_3908, RNA1509_4239, RNA1509_43417} {RNA1509_4239, RNA1509_43417, RNA815_1081.1}
2. MligTC455_49481 2896 60.33 Mlig455_061474

Neo: -

Age: -

Regeneration-upregulated BL: 1.088

Regeneration-enriched BL: 1.088

RBM39 5.568 0.995 0.984 0.805 0.989 0.989 0.806 Mlig455_061474 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.4]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=59.8]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=365, Expect=2e-119]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=365, Expect=1e-119]} {Dmel: FBgn0031883, Caper, [Score=342, Expect=6e-110]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=259, Expect=2e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=273, Expect=2e-85]} {RNA1509_9704} {RNA1310_3436.2, RNA1509_9704} {RNA1509_9704, RNA815_1081.1}
3. MligTC455_47256 1264 26.33 Mlig455_035294

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.234

Region-enriched R4: 1.028/0.00756

FRG1 2.613 - - - 0.741 0.917 0.955 Mlig455_035294 {REF} {Length: 1519} {TRANSSPLICED} {Pfam: FRG1-like domain [PF06229.14, score=186.6]; FAM32A [PF08555.12, score=20.3]} {Human: ENSG00000275145, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000283630, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000283153, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000109536, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]} {Mouse: ENSMUSG00000031590, Frg1, FSHD region gene 1, [RH, Score=209, Expect=7e-67]} {Dmel: FBgn0036964, FRG1, FSHD region gene 1, [RH, Score=168, Expect=7e-51]} {Celegans: WBGene00014177, frg-1, Protein FRG1 homolog, [RH, Score=129, Expect=8e-36]} {Smed: dd_Smed_v6_3094_0_1, dd_Smed_v6_3094_0_1, [RH, Score=206, Expect=8e-66]} {RNA1509_13353, RNA1509_49322} {RNA1310_22014.1, RNA1509_13353, RNA1509_49322} {RNA1509_13353, RNA1509_49322, RNA815_8956}
4. MligTC455_38399 4980 103.75 Mlig455_048481

Neo: Int S/G2/M

Age: -

VCP 0.99 - - - - - 0.990 Mlig455_048481 {REF} {Length: 3323} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=323.2]; AAA+ lid domain [PF17862.3, score=83.8]; Cell division protein 48 (CDC48), N-terminal domain [PF02359.20, score=75.5]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=52.5]; AAA ATPase domain [PF13191.8, score=50.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=43.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=41.5]; Cell division protein 48 (CDC48), domain 2 [PF02933.19, score=41.0]; AAA domain [PF13671.8, score=40.9]; Vps4 C terminal oligomerisation domain [PF09336.12, score=40.1]; AAA domain [PF13401.8, score=38.3]; TIP49 P-loop domain [PF06068.15, score=35.1]; AAA domain [PF13238.8, score=32.1]; RNA helicase [PF00910.24, score=31.2]; AAA domain [PF13173.8, score=29.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=29.0]; ABC transporter [PF00005.29, score=27.1]; IstB-like ATP binding protein [PF01695.19, score=27.1]; AAA domain [PF13521.8, score=27.0]; Parvovirus non-structural protein NS1 [PF01057.19, score=26.4]; P-loop containing dynein motor region [PF12775.9, score=26.1]; AAA domain [PF13207.8, score=25.5]; Bacterial dnaA protein [PF00308.20, score=24.8]; ATPase domain predominantly from Archaea [PF01637.20, score=24.3]; AAA domain [PF13481.8, score=23.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.1]; KaiC [PF06745.15, score=23.0]; AAA domain [PF13479.8, score=22.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=22.2]; Sigma-54 interaction domain [PF00158.28, score=22.1]; NACHT domain [PF05729.14, score=21.1]; Zeta toxin [PF06414.14, score=21.1]; Protein of unknown function (DUF815) [PF05673.15, score=20.4]; Type III restriction enzyme, res subunit [PF04851.17, score=20.2]; NB-ARC domain [PF00931.24, score=20.0]; Sigma-54 interaction domain [PF14532.8, score=19.1]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=19.0]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=18.5]} {Human: ENSG00000165280, VCP, valosin containing protein, [RH, Score=1269, Expect=0.0]} {Mouse: ENSMUSG00000028452, Vcp, valosin containing protein, [RH, Score=1269, Expect=0.0]} {Dmel: FBgn0261014, TER94, [RH, Score=1271, Expect=0.0]} {Celegans: WBGene00008053, cdc-48.2, Transitional endoplasmic reticulum ATPase homolog 2, [RH, Score=1209, Expect=0.0]} {Smed: dd_Smed_v6_482_0_1, dd_Smed_v6_482_0_1, [RH, Score=1309, Expect=0.0]} {RNA1509_11640, RNA1509_13887, RNA1509_41889, RNA1509_514, RNA1509_8519} {RNA1310_4584, RNA1509_11640, RNA1509_13887, RNA1509_41889, RNA1509_514, RNA1509_8519} {RNA1509_11640, RNA1509_13887, RNA1509_41889, RNA1509_514, RNA1509_8519, RNA815_1672.2}
5. MligTC455_39871 1444 30.09 Mlig455_029714, Mlig455_034857

Neo: -

Age: -

STAU2 0.972 - - - 0.972 - -

Mlig455_029714 {REF} {Length: 2011} {Pfam: Staufen C-terminal domain [PF16482.7, score=27.1]; Double-stranded RNA binding motif [PF00035.28, score=19.5]} {RNA1509_53015} {RNA1310_4047.1} {RNA815_17208.1}

Mlig455_034857 {REF} {Length: 3387} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=122.6]; Staufen C-terminal domain [PF16482.7, score=44.8]; double strand RNA binding domain from DEAD END PROTEIN 1 [PF14709.9, score=27.2]} {Human: ENSG00000040341, STAU2, staufen double-stranded RNA binding protein 2, [RH, Score=199, Expect=2e-54]} {Mouse: ENSMUSG00000025920, Stau2, staufen double-stranded RNA binding protein 2, [RH, Score=194, Expect=3e-53]} {Dmel: FBgn0003520, stau, staufen, [RH, Score=102, Expect=7e-22]} {Celegans: WBGene00018857, stau-1, STAUfen (DsRNA binding protein) homolog, [RH, Score=148, Expect=9e-37]} {RNA1509_18826, RNA1509_38637, RNA1509_42637, RNA1509_53015, RNA1509_55172, RNA1509_58024} {RNA1310_4047.1, RNA1509_18826, RNA1509_38637, RNA1509_42637, RNA1509_53015, RNA1509_55172, RNA1509_58024} {RNA1509_18826, RNA1509_38637, RNA1509_42637, RNA1509_53015, RNA1509_55172, RNA1509_58024, RNA815_4500}
6. MligTC455_42952 1133 23.6 Mlig455_038557

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.656

Region-enriched R4: 1.639/0.00071

0.964 - - - 0.964 - - Mlig455_038557 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=40.2]} {RNA1509_10373} {RNA1310_14044.2, RNA1509_10373} {RNA1509_10373, RNA815_9326.1}
7. MligTC455_44044 393 8.19 Mlig455_068889

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 2.803

Regeneration-enriched BL: 2.803

SNRPA 0.958 - - - - - 0.958 Mlig455_068889 {REF} {Length: 1007} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=85.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.1]; Protein of unknown function (DUF4523) [PF15023.8, score=25.7]; Occluded RNA-recognition motif [PF16842.7, score=20.6]} {Human: ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [RH, Score=239, Expect=7e-79]} {Mouse: ENSMUSG00000061479, Snrpa, small nuclear ribonucleoprotein polypeptide A, [RH, Score=237, Expect=4e-78]} {Dmel: FBgn0003449, snf, sans fille, [RH, Score=221, Expect=7e-73]} {Celegans: WBGene00004385, rnp-2, RNP (RRM RNA binding domain) containing, [RH, Score=197, Expect=1e-63]} {Smed: dd_Smed_v6_2274_0_1, dd_Smed_v6_2274_0_1, [RH, Score=253, Expect=1e-85]} {RNA1509_35516, RNA1509_38471, RNA1509_5409} {RNA1310_9619, RNA1509_35516, RNA1509_38471, RNA1509_5409} {RNA1509_35516, RNA1509_38471, RNA1509_5409, RNA815_13424}
8. MligTC455_45486 487 10.14 Mlig455_019746

Neo: -

Age: Down-Up-Up

DLG2 0.956 - - - - 0.956 - Mlig455_019746 {REF} {Length: 3340} {Pfam: Guanylate kinase [PF00625.23, score=164.7]; PDZ domain [PF00595.26, score=69.8]; PDZ domain [PF17820.3, score=37.7]; SH3 domain [PF00018.30, score=33.0]; Variant SH3 domain [PF07653.19, score=27.2]; PDZ domain [PF13180.8, score=22.1]; Variant SH3 domain [PF14604.8, score=20.5]; Procyclic acidic repetitive protein (PARP) [PF05887.13, score=19.1]} {Human: ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [RH, Score=427, Expect=6e-141]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=426, Expect=1e-140]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=434, Expect=1e-141]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [RH, Score=343, Expect=9e-107]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [RH, Score=317, Expect=2e-101]} {RNA1509_16120, RNA1509_26114} {RNA1310_2555.1, RNA1509_16120} {RNA1509_16120, RNA815_2319}
9. MligTC455_42882 1121 23.35 Mlig455_018334

Neo: -

Age: -

EEF2K 0.955 - - 0.955 - - - Mlig455_018334 {REF} {Length: 4963} {Pfam: Alpha-kinase family [PF02816.20, score=188.2]} {Human: ENSG00000103319, EEF2K, eukaryotic elongation factor 2 kinase, [Score=422, Expect=2e-135]; ENSG00000284161, EEF2K, eukaryotic elongation factor 2 kinase, [Score=420, Expect=1e-134]} {Mouse: ENSMUSG00000035064, Eef2k, eukaryotic elongation factor-2 kinase, [Score=416, Expect=8e-133]} {Celegans: WBGene00001160, efk-1, Eukaryotic elongation factor 2 kinase, [RH, Score=320, Expect=1e-96]} {Smed: dd_Smed_v6_9576_0_1, dd_Smed_v6_9576_0_1, [Score=401, Expect=3e-130]} {RNA1509_1554} {RNA1310_5135.1} {RNA815_1164.1}
10. MligTC455_12541 1229 25.6 Mlig455_037225

Neo: -

Age: -

ZFYVE1 0.953 - - - - 0.953 - Mlig455_037225 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=89.3]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [RH, Score=547, Expect=0.0]} {Dmel: FBgn0039492, CG6051, [Score=60.1, Expect=5e-09]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [RH, Score=387, Expect=5e-125]} {RNA1509_11257, RNA1509_55322} {RNA1310_5567, RNA1509_11257, RNA1509_55322} {RNA1509_11257, RNA1509_55322, RNA815_840.1}
11. MligTC455_44854 1026 21.38 Mlig455_021934

Neo: -

Age: -

Region-enriched R5: 1.051/0.00690

RNF217 0.952 - - - 0.952 - - Mlig455_021934 {REF} {Length: 2682} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=56.5]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=172, Expect=6e-46]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=170, Expect=1e-45]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=72.8, Expect=3e-13]} {Celegans: WBGene00013270, Y57A10A.31, [Score=78.6, Expect=8e-15]} {Smed: dd_Smed_v6_7110_0_1, dd_Smed_v6_7110_0_1, [Score=135, Expect=2e-33]} {RNA1509_38984, RNA1509_4132} {RNA1310_7549, RNA1509_38984} {RNA1509_38984, RNA815_2398.1}
12. MligTC455_39898 738 15.38 Mlig455_030521

Neo: Irradiation

Age: -

Region-enriched R4: 2.375/0.00002

ZNF569 0.951 - - - - - 0.951 Mlig455_030521 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=113.0]; Zinc finger, C2H2 type [PF00096.28, score=73.4]; C2H2-type zinc finger [PF13894.8, score=62.0]; Zinc-finger of C2H2 type [PF12874.9, score=25.8]; C2H2-type zinc finger [PF13912.8, score=22.8]; zinc-finger of a C2HC-type [PF13913.8, score=22.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=21.9]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=167, Expect=2e-44]; ENSG00000278129, ZNF8, zinc finger protein 8, [Score=167, Expect=5e-45]; ENSG00000160961, ZNF333, zinc finger protein 333, [Score=166, Expect=4e-44]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=164, Expect=6e-44]; ENSG00000130182, ZSCAN10, zinc finger and SCAN domain containing 10, [Score=163, Expect=2e-43]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=162, Expect=3e-43]; ENSG00000175691, ZNF77, zinc finger protein 77, [Score=162, Expect=3e-43]; ENSG00000187801, ZFP69B, ZFP69 zinc finger protein B, [Score=162, Expect=1e-43]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=160, Expect=5e-43]; ENSG00000172006, ZNF554, zinc finger protein 554, [Score=160, Expect=8e-43]; ENSG00000189042, ZNF567, zinc finger protein 567, [Score=159, Expect=6e-42]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=159, Expect=1e-41]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=159, Expect=5e-41]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=159, Expect=9e-42]; ENSG00000268696, ZNF723, zinc finger protein 723, [Score=159, Expect=1e-42]; ENSG00000170100, ZNF778, zinc finger protein 778, [Score=159, Expect=1e-41]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=159, Expect=1e-41]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=159, Expect=5e-42]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=170, Expect=2e-45]; ENSMUSG00000066880, Zfp617, zinc finger protein 617, [Score=169, Expect=5e-46]; ENSMUSG00000059975, Zfp74, zinc finger protein 74, [Score=167, Expect=2e-44]; ENSMUSG00000032425, Zfp949, zinc finger protein 949, [Score=166, Expect=1e-44]; ENSMUSG00000064141, Zfp69, zinc finger protein 69, [Score=165, Expect=3e-44]; ENSMUSG00000060397, Zfp128, zinc finger protein 128, [Score=165, Expect=2e-44]; ENSMUSG00000031079, Zfp300, zinc finger protein 300, [Score=164, Expect=7e-44]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=163, Expect=1e-43]; ENSMUSG00000022526, Zfp251, zinc finger protein 251, [Score=162, Expect=4e-43]; ENSMUSG00000060510, Zfp266, zinc finger protein 266, [Score=162, Expect=3e-43]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=162, Expect=2e-42]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=162, Expect=1e-42]} {Dmel: FBgn0038301, CG6654, [Score=159, Expect=3e-42]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=137, Expect=1e-37]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=141, Expect=4e-39]} {RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1310_8262, RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1509_12331, RNA1509_18316, RNA1509_37936, RNA815_4306.2}

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