Data search
Results for MligTC455_12552
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12552 | 150 | 3.13 | Mlig455_063669 | Neo: - Age: - |
Mlig455_063669 {REF} {Length: 690} {RNA1509_32639} {RNA1310_46019, RNA1509_32639} {RNA1509_32639, RNA815_20672} |
Cumulative graph for MligTC455_12552
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.947 | 2.176 | 0.65200 | 1.00000 | |
| RegionR2 | 0.797 | 2.176 | 0.35133 | 0.74492 | |
| RegionR3 | -0.102 | 2.176 | 0.90142 | 1.00000 | |
| RegionR4 | -0.677 | 2.176 | 0.45728 | 0.78539 | |
| RegionR5 | -0.917 | 2.176 | 0.23663 | 0.54604 | |
| RegionR6 | 1.049 | 2.176 | 0.12363 | 0.64057 | |
| RegionR7 | 0.718 | 2.176 | 0.39306 | 1.00000 | |
| RegionR8 | 0.079 | 2.176 | 0.94343 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.568 | 2.176 | 0.46155 | 1.00000 | |
| RegenerationR2 | 0.551 | 2.176 | 0.41044 | 0.82048 | |
| RegenerationR3 | -0.319 | 2.176 | 0.70379 | 0.94914 | |
| RegenerationR4 | 0.567 | 2.176 | 0.51705 | 0.87836 | |
| RegenerationR5 | -0.727 | 2.176 | 0.41269 | 0.80748 | |
| RegenerationR6 | -2.547 | 2.176 | 0.00918 | 0.11758 | |
| RegenerationBL | -0.372 | 2.176 | 0.69565 | 1.00000 | |
| RegenerationTP | -0.677 | 2.176 | 0.52928 | 0.91981 |
Genes with expression patterns similar to MligTC455_12552
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12552 | 150 | 3.13 | Mlig455_063669 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063669 {REF} {Length: 690} {RNA1509_32639} {RNA1310_46019, RNA1509_32639} {RNA1509_32639, RNA815_20672} | |
| 2. | MligTC455_53524 | 34 | 0.7 | Mlig455_010882 | Neo: - Age: - Region-enriched R2: 5.283/0.01696 |
1.665 | - | 0.710 | - | - | 0.955 | - | Mlig455_010882 {REF} {Length: 1818} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=33.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.7]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=102, Expect=9e-24]} {RNA1310_45713} {RNA815_35716} | |
| 3. | MligTC455_40156 | 18 | 0.38 | Mlig455_038693 | Neo: - |
0.989 | - | - | - | - | 0.989 | - | Mlig455_038693 {REF} {Length: 2831} {RNA1509_1762} {RNA1310_2511} {RNA815_910.1} | |
| 4. | MligTC455_26074 | 4 | 0.08 | Mlig455_007443 | Neo: - Age: - |
0.984 | - | - | - | - | 0.984 | - | Mlig455_007443 {REF} {Length: 3942} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=94.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=91.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.8]; Aspartyl protease [PF13650.8, score=23.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=180, Expect=5e-49]} {RNA1509_34968} {RNA1310_827, RNA1509_34968} {RNA1509_34968, RNA815_6876} | |
| 5. | MligTC455_56231 | 7 | 0.14 | Mlig455_043876 | Neo: - Age: - |
0.984 | - | - | - | - | 0.984 | - | Mlig455_043876 {REF} {Length: 577} {RNA1310_34857} {RNA815_56033} | |
| 6. | MligTC455_13493 | 28 | 0.58 | Mlig455_020299 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_020299 {REF} {Length: 568} {RNA1310_11315} {RNA815_53929} | |
| 7. | MligTC455_02154 | 8 | 0.16 | Mlig455_000640 | Neo: Irradiation Age: Up-Down-Down |
TTC17 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_000640 {REF} {Length: 3975} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=35.8]; Tetratricopeptide repeat [PF00515.30, score=33.6]; Tetratricopeptide repeat [PF13176.8, score=29.2]; Tetratricopeptide repeat [PF13424.8, score=23.7]; TPR repeat [PF13414.8, score=21.7]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [RH, Score=159, Expect=5e-39]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [RH, Score=160, Expect=2e-39]} {Dmel: FBgn0029713, CG11436, [RH, Score=62.8, Expect=1e-09]} {Celegans: WBGene00020553, T19A5.1, [RH, Score=57.0, Expect=9e-08]} {Smed: dd_Smed_v6_11405_0_1, dd_Smed_v6_11405_0_1, [RH, Score=258, Expect=5e-71]} {RNA1509_10619, RNA1509_58302} {RNA1310_1270.1, RNA1509_10619, RNA1509_58302} {RNA1509_10619, RNA1509_58302, RNA815_24250} |
| 8. | MligTC455_45205 | 147 | 3.06 | Mlig455_058679 | Neo: Int S/G2/M Age: - Region-enriched R2: 3.694/0.00736 |
0.974 | - | - | - | - | 0.974 | - | Mlig455_058679 {REF} {Length: 1141} {RNA1509_48085} {RNA1310_40804} {RNA815_27336} | |
| 9. | MligTC455_13102 | 65 | 1.35 | Mlig455_056246 | Neo: - Age: Up-Down-Down Region-enriched R2: 6.206/0.00027 |
NWD2 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_056246 {REF} {Length: 8104} {Pfam: NACHT domain [PF05729.14, score=51.2]; AAA ATPase domain [PF13191.8, score=36.8]; Domain of unknown function (DUF4062) [PF13271.8, score=36.5]; ATPase domain predominantly from Archaea [PF01637.20, score=23.7]; AAA domain [PF13401.8, score=20.6]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=451, Expect=2e-130]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [RH, Score=436, Expect=2e-125]} {Dmel: FBgn0038397, CG10185, [RH, Score=980, Expect=0.0]} {Celegans: WBGene00020254, T05C3.2, [RH, Score=925, Expect=0.0]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=344, Expect=9e-96]} {RNA1509_20730} {RNA1310_1147} {RNA815_11922} |
| 10. | MligTC455_32241 | 156 | 3.24 | Mlig455_063650 | Neo: - Age: - Region-enriched R4: 3.105/0.02582 |
MGLL | 0.967 | - | - | - | - | 0.967 | - | Mlig455_063650 {REF} {Length: 1932} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=135.3]; Alpha/beta hydrolase family [PF12697.9, score=39.2]; alpha/beta hydrolase fold [PF00561.22, score=34.4]; Prolyl oligopeptidase family [PF00326.23, score=21.7]} {Human: ENSG00000074416, MGLL, monoglyceride lipase, [Score=97.4, Expect=6e-23]} {Mouse: ENSMUSG00000033174, Mgll, monoglyceride lipase, [Score=106, Expect=2e-26]} {Smed: dd_Smed_v6_6796_0_1, dd_Smed_v6_6796_0_1, [Score=91.7, Expect=2e-21]} {RNA1509_47433} {RNA1310_29208} {RNA815_26468} |
| 11. | MligTC455_03110 | 58 | 1.2 | Mlig455_069260 | Neo: - Age: - |
GABBR2 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_069260 {REF} {Length: 6190} {TRANSSPLICED} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=150.8]; Receptor family ligand binding region [PF01094.30, score=121.6]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=259, Expect=1e-73]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=255, Expect=2e-72]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=238, Expect=4e-66]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=223, Expect=8e-62]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=112, Expect=1e-28]} {RNA1509_59815} {RNA1310_19655} {RNA815_19308} |
| 12. | MligTC455_40790 | 212 | 4.43 | Mlig455_032027 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 2.642/0.01234 |
PDE11A | 0.96 | - | - | - | - | 0.960 | - | Mlig455_032027 {REF} {Length: 3463} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=143.6]; GAF domain [PF01590.28, score=84.0]; GAF domain [PF13185.8, score=50.1]; GAF domain [PF13492.8, score=44.7]} {Human: ENSG00000128655, PDE11A, phosphodiesterase 11A, [Score=407, Expect=3e-128]; ENSG00000138735, PDE5A, phosphodiesterase 5A, [Score=405, Expect=4e-128]} {Mouse: ENSMUSG00000075270, Pde11a, phosphodiesterase 11A, [Score=405, Expect=1e-127]; ENSMUSG00000053965, Pde5a, phosphodiesterase 5A, cGMP-specific, [Score=404, Expect=5e-128]} {Dmel: FBgn0085370, Pde11, Phosphodiesterase 11, [Score=417, Expect=1e-130]} {Celegans: WBGene00016328, pde-5, Probable 3',5'-cyclic phosphodiesterase pde-5, [Score=232, Expect=1e-65]} {Smed: dd_Smed_v6_8595_0_4, dd_Smed_v6_8595_0_4, [Score=441, Expect=6e-142]} {RNA1509_52520} {RNA1310_8630.1, RNA1509_52520} {RNA1509_52520, RNA815_26873} |
| 13. | MligTC455_18003 | 26 | 0.54 | Mlig455_050296 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_050296 {REF} {Length: 1873} {RNA1509_36362} {RNA1310_57811} {RNA815_23362} | |
| 14. | MligTC455_35572 | 171 | 3.57 | Mlig455_052756 | Neo: - Age: - |
GBA2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_052756 {REF} {Length: 5456} {TRANSSPLICED} {Pfam: Glycosyl-hydrolase family 116, catalytic region [PF04685.15, score=406.6]; beta-glucosidase 2, glycosyl-hydrolase family 116 N-term [PF12215.10, score=265.2]} {Human: ENSG00000070610, GBA2, glucosylceramidase beta 2, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000028467, Gba2, glucosidase beta 2, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0028916, CG33090, [RH, Score=350, Expect=2e-106]} {Celegans: WBGene00013670, hpo-13, Non-lysosomal glucosylceramidase, [RH, Score=536, Expect=7e-177]} {Smed: dd_Smed_v6_9887_0_1, dd_Smed_v6_9887_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_35078, RNA1509_51930, RNA1509_53283, RNA1509_55884, RNA1509_56084} {RNA1310_7114.1, RNA1509_35078, RNA1509_53283, RNA1509_55884, RNA1509_56084} {RNA1509_35078, RNA1509_53283, RNA1509_55884, RNA1509_56084, RNA815_2167.1} |
| 15. | MligTC455_49303 | 64 | 1.33 | Mlig455_058897 | Neo: - Age: - |
SALL3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_058897 {REF} {Length: 4598} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.9]; C2H2-type zinc finger [PF13894.8, score=55.8]; Zinc-finger double domain [PF13465.8, score=55.4]; Zinc-finger of C2H2 type [PF12874.9, score=45.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=39.1]} {Human: ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=91.3, Expect=5e-18]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=90.9, Expect=1e-17]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=90.1, Expect=2e-17]} {Mouse: ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=92.0, Expect=2e-18]; ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=91.7, Expect=3e-18]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Dmel: FBgn0261648, salm, spalt major, [RH, Score=97.4, Expect=5e-20]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [RH, Score=97.4, Expect=2e-20]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [RH, Score=121, Expect=2e-28]} {RNA1310_43057} {RNA815_29425} |
| 16. | MligTC455_22555 | 16 | 0.34 | Mlig455_014043 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_014043 {REF} {Length: 1521} {RNA1509_57689} {RNA1310_98725} {RNA815_30060} | |
| 17. | MligTC455_00401 | 18 | 0.37 | Mlig455_066572 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_066572 {REF} {Length: 123} {NoTransDecoderORF} {RNA1310_85631} | |
| 18. | MligTC455_29482 | 49 | 1.03 | Mlig455_016797 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_016797 {REF} {Length: 3680} {RNA1509_4722} {RNA1310_655.4} {RNA815_335.1} | |
| 19. | MligTC455_48569 | 31 | 0.65 | Mlig455_066874 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_066874 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1310_59259} | |
| 20. | MligTC455_43621 | 222 | 4.63 | Mlig455_025703 | Neo: - Age: - Region-enriched R4: 4.147/0.00000 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_025703 {REF} {Length: 2480} {RNA1509_50338} {RNA1310_25031} {RNA815_24211} | |
| 21. | MligTC455_34072 | 454 | 9.46 | Mlig455_029674 | Neo: - Age: logFC(26M/2M)=-0.376 Region-enriched R2: 2.315/0.04888 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_029674 {REF} {Length: 3896} {Pfam: SH3 domain [PF17902.3, score=34.0]; Plectin repeat [PF00681.22, score=33.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [RH, Score=79.3, Expect=4e-15]} {RNA1509_4651} {RNA1310_7377.1, RNA1509_4651} {RNA1509_4651, RNA815_2196} |
Berezikov Lab - 2020-2021 © ERIBA