Data search
Results for MligTC455_29482
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29482 | 49 | 1.03 | Mlig455_016797 | Neo: - Age: - |
Mlig455_016797 {REF} {Length: 3680} {RNA1509_4722} {RNA1310_655.4} {RNA815_335.1} |
Cumulative graph for MligTC455_29482
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.978 | 1.066 | 1.00000 | 1.00000 | |
| RegionR2 | 3.738 | 1.066 | 1.00000 | 1.00000 | |
| RegionR3 | 0.655 | 1.066 | 0.99962 | 1.00000 | |
| RegionR4 | -2.985 | 1.066 | 1.00000 | 1.00000 | |
| RegionR5 | -0.462 | 1.066 | 1.00000 | 1.00000 | |
| RegionR6 | 0.899 | 1.066 | 0.99968 | 1.00000 | |
| RegionR7 | 0.969 | 1.066 | 1.00000 | 1.00000 | |
| RegionR8 | 1.165 | 1.066 | 0.99982 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.958 | 1.066 | 0.99968 | 1.00000 | |
| RegenerationR2 | 5.19 | 1.066 | 0.01870 | 0.22483 | |
| RegenerationR3 | 5.906 | 1.066 | 0.01469 | 0.22164 | |
| RegenerationR4 | 6.183 | 1.066 | 0.00776 | 0.13007 | |
| RegenerationR5 | 5.676 | 1.066 | 0.01156 | 0.18956 | |
| RegenerationR6 | 6.187 | 1.066 | 0.01798 | 0.16551 | |
| RegenerationBL | 5.188 | 1.066 | 0.01228 | 0.11333 | |
| RegenerationTP | 5.823 | 1.066 | 0.01778 | 0.22872 |
Genes with expression patterns similar to MligTC455_29482
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29482 | 49 | 1.03 | Mlig455_016797 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_016797 {REF} {Length: 3680} {RNA1509_4722} {RNA1310_655.4} {RNA815_335.1} | |
| 2. | MligTC455_51400 | 220 | 4.58 | Mlig455_030378 | Neo: - Age: - |
KCNT1 | 1.737 | - | - | - | - | 0.772 | 0.965 | Mlig455_030378 {REF} {Length: 4793} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=91.7]; Ion channel [PF07885.18, score=43.4]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [RH, Score=1127, Expect=0.0]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [RH, Score=1107, Expect=0.0]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [RH, Score=1106, Expect=0.0]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [RH, Score=1102, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=821, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [RH, Score=846, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1355, Expect=0.0]} {RNA1509_10851} {RNA1310_11341} {RNA815_3987} |
| 3. | MligTC455_24844 | 70 | 1.45 | Mlig455_016641, Mlig455_035592 | Neo: - Age: - Region-enriched R4: 2.424/0.04540 |
0.974 | - | - | - | - | 0.974 | - | Mlig455_016641 {REF} {Length: 2405} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=70.0]} {Smed: dd_Smed_v6_14020_0_1, dd_Smed_v6_14020_0_1, [RH, Score=145, Expect=5e-44]} {RNA1509_2024} {RNA1310_10624} {RNA815_8671} Mlig455_035592 {REF} {Length: 632} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=70.0]} {Smed: dd_Smed_v6_14020_0_1, dd_Smed_v6_14020_0_1, [RH, Score=145, Expect=5e-44]} {RNA1310_10624} {RNA815_27265} |
|
| 4. | MligTC455_40790 | 212 | 4.43 | Mlig455_032027 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 2.642/0.01234 |
PDE11A | 0.967 | - | - | - | - | 0.967 | - | Mlig455_032027 {REF} {Length: 3463} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=143.6]; GAF domain [PF01590.28, score=84.0]; GAF domain [PF13185.8, score=50.1]; GAF domain [PF13492.8, score=44.7]} {Human: ENSG00000128655, PDE11A, phosphodiesterase 11A, [Score=407, Expect=3e-128]; ENSG00000138735, PDE5A, phosphodiesterase 5A, [Score=405, Expect=4e-128]} {Mouse: ENSMUSG00000075270, Pde11a, phosphodiesterase 11A, [Score=405, Expect=1e-127]; ENSMUSG00000053965, Pde5a, phosphodiesterase 5A, cGMP-specific, [Score=404, Expect=5e-128]} {Dmel: FBgn0085370, Pde11, Phosphodiesterase 11, [Score=417, Expect=1e-130]} {Celegans: WBGene00016328, pde-5, Probable 3',5'-cyclic phosphodiesterase pde-5, [Score=232, Expect=1e-65]} {Smed: dd_Smed_v6_8595_0_4, dd_Smed_v6_8595_0_4, [Score=441, Expect=6e-142]} {RNA1509_52520} {RNA1310_8630.1, RNA1509_52520} {RNA1509_52520, RNA815_26873} |
| 5. | MligTC455_06878 | 14 | 0.3 | Mlig455_054354 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_054354 {REF} {Length: 593} {NoTransDecoderORF} | |
| 6. | MligTC455_26074 | 4 | 0.08 | Mlig455_007443 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_007443 {REF} {Length: 3942} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=94.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=91.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.8]; Aspartyl protease [PF13650.8, score=23.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=180, Expect=5e-49]} {RNA1509_34968} {RNA1310_827, RNA1509_34968} {RNA1509_34968, RNA815_6876} | |
| 7. | MligTC455_56231 | 7 | 0.14 | Mlig455_043876 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_043876 {REF} {Length: 577} {RNA1310_34857} {RNA815_56033} | |
| 8. | MligTC455_02154 | 8 | 0.16 | Mlig455_000640 | Neo: Irradiation Age: Up-Down-Down |
TTC17 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_000640 {REF} {Length: 3975} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=35.8]; Tetratricopeptide repeat [PF00515.30, score=33.6]; Tetratricopeptide repeat [PF13176.8, score=29.2]; Tetratricopeptide repeat [PF13424.8, score=23.7]; TPR repeat [PF13414.8, score=21.7]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [RH, Score=159, Expect=5e-39]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [RH, Score=160, Expect=2e-39]} {Dmel: FBgn0029713, CG11436, [RH, Score=62.8, Expect=1e-09]} {Celegans: WBGene00020553, T19A5.1, [RH, Score=57.0, Expect=9e-08]} {Smed: dd_Smed_v6_11405_0_1, dd_Smed_v6_11405_0_1, [RH, Score=258, Expect=5e-71]} {RNA1509_10619, RNA1509_58302} {RNA1310_1270.1, RNA1509_10619, RNA1509_58302} {RNA1509_10619, RNA1509_58302, RNA815_24250} |
| 9. | MligTC455_31916 | 78 | 1.63 | Mlig455_067080 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_067080 {REF} {Length: 1168} {NoTransDecoderORF} {RNA1509_48060} {RNA1310_6149} {RNA815_1772.1} | |
| 10. | MligTC455_12552 | 150 | 3.13 | Mlig455_063669 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_063669 {REF} {Length: 690} {RNA1509_32639} {RNA1310_46019, RNA1509_32639} {RNA1509_32639, RNA815_20672} | |
| 11. | MligTC455_40156 | 18 | 0.38 | Mlig455_038693 | Neo: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_038693 {REF} {Length: 2831} {RNA1509_1762} {RNA1310_2511} {RNA815_910.1} |
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