Data search
Results for MligTC455_12654
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12654 | 82 | 1.72 | Mlig455_019923 | Neo: - Age: - |
Mlig455_019923 {REF} {Length: 853} {RNA1509_54363} {RNA1310_57594, RNA1509_54363} {RNA1509_54363, RNA815_31588} |
Cumulative graph for MligTC455_12654
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -9.762 | 1.643 | 0.04607 | 0.51341 | |
| RegionR2 | 4.931 | 1.643 | 0.01843 | 0.14535 | |
| RegionR3 | 1.681 | 1.643 | 0.35677 | 0.89178 | |
| RegionR4 | -4.943 | 1.643 | 1.00000 | 1.00000 | |
| RegionR5 | -0.542 | 1.643 | 0.97962 | 1.00000 | |
| RegionR6 | 0.801 | 1.643 | 0.68437 | 1.00000 | |
| RegionR7 | 3.709 | 1.643 | 0.02884 | 0.32134 | |
| RegionR8 | 4.125 | 1.643 | 0.06574 | 0.49515 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.473 | 1.643 | 0.99989 | 1.00000 | |
| RegenerationR2 | 0.205 | 1.643 | 0.96625 | 1.00000 | |
| RegenerationR3 | 2.218 | 1.643 | 0.35921 | 0.77601 | |
| RegenerationR4 | 2.38 | 1.643 | 0.34944 | 0.78020 | |
| RegenerationR5 | 1.661 | 1.643 | 0.50510 | 0.86103 | |
| RegenerationR6 | 3.72 | 1.643 | 0.07618 | 0.34504 | |
| RegenerationBL | 3.46 | 1.643 | 0.14752 | 0.45847 | |
| RegenerationTP | 0.662 | 1.643 | 0.89725 | 1.00000 |
Genes with expression patterns similar to MligTC455_12654
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12654 | 82 | 1.72 | Mlig455_019923 | Neo: - Age: - |
2 | - | 1.000 | - | - | 1.000 | - | Mlig455_019923 {REF} {Length: 853} {RNA1509_54363} {RNA1310_57594, RNA1509_54363} {RNA1509_54363, RNA815_31588} | |
| 2. | MligTC455_20279 | 667 | 13.89 | Mlig455_006734 | Neo: - Age: logFC(26M/2M)=0.289 Region-enriched R8: 2.499/0.00019 |
SH3GLB1 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_006734 {REF} {Length: 4587} {Pfam: BAR domain [PF03114.20, score=167.3]; Bin/amphiphysin/Rvs domain for vesicular trafficking [PF10455.11, score=26.3]; BAR domain of APPL family [PF16746.7, score=18.6]} {Human: ENSG00000097033, SH3GLB1, SH3 domain containing GRB2 like, endophilin B1, [Score=214, Expect=1e-61]} {Mouse: ENSMUSG00000037062, Sh3glb1, SH3-domain GRB2-like B1 (endophilin), [Score=214, Expect=4e-62]} {Dmel: FBgn0034433, EndoB, Endophilin B, [Score=196, Expect=1e-55]} {Celegans: WBGene00001335, F35A5.8, Endophilin-Related Protein, [Score=183, Expect=4e-51]} {Smed: dd_Smed_v6_1387_0_2, dd_Smed_v6_1387_0_2, [Score=169, Expect=2e-47]} {RNA1509_41110} {RNA1310_4694.1} {RNA815_6397.1} |
| 3. | MligTC455_50425 | 1754 | 36.55 | Mlig455_021985, Mlig455_031763, Mlig455_051833, Mlig455_063612 | Neo: - Age: Down-Up-Down |
0.966 | - | - | - | - | 0.966 | - | Mlig455_021985 {REF} {Length: 394} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.2} {RNA815_1698.1} Mlig455_031763 {REF} {Length: 391} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.2} {RNA815_1698.1} Mlig455_051833 {REF} {Length: 498} {TRANSSPLICED} {RNA1509_43937} {RNA1310_900.2} {RNA815_1698.1} Mlig455_063612 {REF} {Length: 710} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43937} {RNA1310_145253} {RNA815_1698.1} |
|
| 4. | MligTC455_39673 | 301 | 6.27 | Mlig455_032019 | Neo: - Age: logFC(26M/2M)=-0.502 |
RAP2B | 0.965 | - | - | - | - | 0.965 | - | Mlig455_032019 {REF} {Length: 2377} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=185.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=72.2]; ADP-ribosylation factor family [PF00025.23, score=38.3]; RsgA GTPase [PF03193.18, score=26.7]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.7]} {Human: ENSG00000181467, RAP2B, RAP2B, member of RAS oncogene family, [Score=214, Expect=4e-71]; ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=214, Expect=3e-71]; ENSG00000123728, RAP2C, RAP2C, member of RAS oncogene family, [Score=209, Expect=4e-69]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=209, Expect=4e-69]; ENSG00000125249, RAP2A, RAP2A, member of RAS oncogene family, [Score=206, Expect=4e-68]} {Mouse: ENSMUSG00000051615, Rap2a, RAS related protein 2a, [Score=215, Expect=7e-72]; ENSMUSG00000036894, Rap2b, RAP2B, member of RAS oncogene family, [Score=214, Expect=3e-71]; ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=214, Expect=2e-71]; ENSMUSG00000050029, Rap2c, RAP2C, member of RAS oncogene family, [Score=209, Expect=2e-69]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=209, Expect=3e-69]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [Score=208, Expect=4e-69]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [RH, Score=222, Expect=1e-74]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=207, Expect=9e-69]} {RNA1509_19937} {RNA1310_3952} {RNA815_8102} |
| 5. | MligTC455_27670 | 2023 | 42.15 | Mlig455_048996, Mlig455_049013, Mlig455_067753 | Neo: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_048996 {REF} {Length: 700} {RNA1509_15098} {RNA1310_42155} {RNA815_20546} Mlig455_049013 {REF} {Length: 778} {RNA1509_15098} {RNA1310_42155} {RNA815_20546} Mlig455_067753 {REF} {Length: 887} {RNA1509_15098} {RNA1310_42155, RNA1509_15098} {RNA1509_15098, RNA815_20546} |
|
| 6. | MligTC455_51413 | 414 | 8.63 | Mlig455_025235 | Neo: - Age: logFC(26M/2M)=0.368 |
CTH | 0.959 | - | - | - | - | 0.959 | - | Mlig455_025235 {REF} {Length: 1605} {TRANSSPLICED} {Pfam: Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=442.5]; Methionine gamma-lyase [PF06838.13, score=17.2]} {Human: ENSG00000116761, CTH, cystathionine gamma-lyase, [RH, Score=411, Expect=1e-140]} {Mouse: ENSMUSG00000028179, Cth, cystathionase (cystathionine gamma-lyase), [RH, Score=423, Expect=1e-145]} {Dmel: FBgn0000566, Eip55E, [RH, Score=427, Expect=3e-147]} {Celegans: WBGene00022856, cth-2, Putative cystathionine gamma-lyase 2, [RH, Score=419, Expect=3e-144]} {Smed: dd_Smed_v6_2859_0_1, dd_Smed_v6_2859_0_1, [RH, Score=402, Expect=2e-137]} {RNA1509_28820} {RNA1310_16713} {RNA815_6828.1} |
| 7. | MligTC455_39067 | 1049 | 21.85 | Mlig455_015577 | Neo: - |
GSTP1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_015577 {REF} {Length: 1133} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=55.5]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=34.0]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=26.7]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=26.1]; Glutathione S-transferase N-terminal domain [PF17172.6, score=20.4]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=20.2]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=137, Expect=3e-40]} {Mouse: ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=142, Expect=2e-42]; ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=142, Expect=2e-42]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [Score=140, Expect=3e-41]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [Score=140, Expect=3e-41]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [RH, Score=101, Expect=5e-26]} {Celegans: WBGene00001749, gst-1, Glutathione S-transferase P, [RH, Score=145, Expect=1e-43]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=93.2, Expect=1e-23]} {RNA1509_48479, RNA1509_6171} {RNA1310_28502.1, RNA1509_48479} {RNA1509_48479, RNA815_13314} |
| 8. | MligTC455_40979 | 518 | 10.8 | Mlig455_066898 | Neo: - Age: logFC(26M/2M)=-0.780 Region-enriched R7: 3.575/0.00000 Regeneration-downregulated BL: -5.014 Regeneration-depleted BL: -5.014 |
WSCD2 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_066898 {REF} {Length: 1408} {Pfam: WSC domain [PF01822.21, score=87.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=64.3, Expect=7e-11]} {Dmel: FBgn0029697, CG15570, [Score=57.8, Expect=7e-09]} {RNA1509_2474} {RNA1310_28319.1} {RNA815_11100.2} |
| 9. | MligTC455_52643 | 5694 | 118.63 | Mlig455_044832 | Neo: - Age: Down-Up-Down |
CALM1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_044832 {REF} {Length: 2065} {Pfam: EF hand [PF00036.34, score=129.9]; EF-hand domain pair [PF13499.8, score=116.0]; EF hand [PF13202.8, score=114.5]; EF-hand domain [PF13405.8, score=104.0]; EF-hand domain pair [PF13833.8, score=99.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=41.9]; EF-hand domain [PF14658.8, score=39.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=36.5]; Dockerin type I domain [PF00404.20, score=33.2]; Uncharacterised protein family (UPF0154) [PF03672.15, score=30.4]; Caleosin related protein [PF05042.15, score=23.3]; Tellurite resistance protein TerB [PF05099.15, score=22.5]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=155, Expect=8e-49]; ENSG00000143933, CALM2, calmodulin 2, [Score=154, Expect=2e-48]; ENSG00000160014, CALM3, calmodulin 3, [Score=154, Expect=2e-48]; ENSG00000178363, CALML3, calmodulin like 3, [Score=152, Expect=2e-47]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=154, Expect=2e-48]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=154, Expect=2e-48]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=154, Expect=2e-48]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=149, Expect=1e-46]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=153, Expect=3e-48]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=153, Expect=2e-48]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=153, Expect=2e-48]} {RNA1509_2226, RNA1509_31686, RNA1509_36513, RNA1509_55237, RNA1509_57458} {RNA1310_27597, RNA1509_2226, RNA1509_31686, RNA1509_36513, RNA1509_55237, RNA1509_57458} {RNA1509_2226, RNA1509_31686, RNA1509_36513, RNA1509_55237, RNA1509_57458, RNA815_7140} |
| 10. | MligTC455_35511 | 2685 | 55.94 | Mlig455_028291 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_028291 {REF} {Length: 1495} {RNA1509_42313, RNA1509_7021} {RNA1310_28853, RNA1509_42313, RNA1509_7021} {RNA1509_42313, RNA1509_7021, RNA815_13425.1} | |
| 11. | MligTC455_29154 | 13535 | 281.98 | Mlig455_036362 | Neo: - Age: - Region-enriched R4: 2.051/0.00015 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_036362 {REF} {Length: 87} {NoTransDecoderORF} | |
| 12. | MligTC455_26713 | 1834 | 38.2 | Mlig455_062582 | Neo: - Age: Down-Up-Up Region-enriched R6: 1.015/0.03194 |
RHOA | 0.954 | - | - | - | - | 0.954 | - | Mlig455_062582 {REF} {Length: 1609} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=164.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.9]; ADP-ribosylation factor family [PF00025.23, score=30.2]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.7]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [Score=188, Expect=4e-60]; ENSG00000155366, RHOC, ras homolog family member C, [Score=183, Expect=4e-58]; ENSG00000143878, RHOB, ras homolog family member B, [Score=179, Expect=3e-56]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [Score=188, Expect=2e-60]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [Score=183, Expect=3e-58]; ENSMUSG00000036463, 4930544G11Rik, RIKEN cDNA 4930544G11 gene, [Score=181, Expect=3e-57]; ENSMUSG00000054364, Rhob, ras homolog family member B, [Score=179, Expect=2e-56]} {Dmel: FBgn0014020, Rho1, [Score=184, Expect=5e-59]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [Score=182, Expect=2e-58]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [Score=186, Expect=7e-60]} {RNA1509_22569, RNA1509_3247} {RNA1310_15563, RNA1509_22569, RNA1509_3247} {RNA1509_22569, RNA1509_3247, RNA815_8100} |
| 13. | MligTC455_26667 | 92 | 1.91 | Mlig455_014529 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_014529 {REF} {Length: 1721} {RNA1509_15438} {RNA1310_134322} {RNA815_18679} | |
| 14. | MligTC455_45689 | 863 | 17.97 | Mlig455_051128 | Neo: - Age: logFC(26M/2M)=0.541 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_051128 {REF} {Length: 2347} {RNA1509_31908} {RNA1310_21586} {RNA815_10734.1} | |
| 15. | MligTC455_34354 | 1250 | 26.04 | Mlig455_041299, Mlig455_056201 | Neo: - Age: - Regeneration-downregulated BL: -2.125 Regeneration-depleted BL: -2.125 |
DYNLRB2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_041299 {REF} {Length: 5797} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728, RNA1509_41581} {RNA1310_30473, RNA1509_41581} {RNA1509_41581, RNA815_14022} Mlig455_056201 {REF} {Length: 1126} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728} {RNA1310_30473, RNA1509_28728} {RNA1509_28728, RNA815_14022} |
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