Data search
Results for MligTC455_39673
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39673 | 301 | 6.27 | Mlig455_032019 | Neo: - Age: logFC(26M/2M)=-0.502 |
RAP2B | Mlig455_032019 {REF} {Length: 2377} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=185.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=72.2]; ADP-ribosylation factor family [PF00025.23, score=38.3]; RsgA GTPase [PF03193.18, score=26.7]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.7]} {Human: ENSG00000181467, RAP2B, RAP2B, member of RAS oncogene family, [Score=214, Expect=4e-71]; ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=214, Expect=3e-71]; ENSG00000123728, RAP2C, RAP2C, member of RAS oncogene family, [Score=209, Expect=4e-69]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=209, Expect=4e-69]; ENSG00000125249, RAP2A, RAP2A, member of RAS oncogene family, [Score=206, Expect=4e-68]} {Mouse: ENSMUSG00000051615, Rap2a, RAS related protein 2a, [Score=215, Expect=7e-72]; ENSMUSG00000036894, Rap2b, RAP2B, member of RAS oncogene family, [Score=214, Expect=3e-71]; ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=214, Expect=2e-71]; ENSMUSG00000050029, Rap2c, RAP2C, member of RAS oncogene family, [Score=209, Expect=2e-69]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=209, Expect=3e-69]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [Score=208, Expect=4e-69]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [RH, Score=222, Expect=1e-74]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=207, Expect=9e-69]} {RNA1509_19937} {RNA1310_3952} {RNA815_8102} |
Cumulative graph for MligTC455_39673
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.43 | 3.031 | 0.20818 | 0.84736 | |
| RegionR2 | 0.281 | 3.031 | 0.66257 | 0.99363 | |
| RegionR3 | -0.02 | 3.031 | 0.97016 | 1.00000 | |
| RegionR4 | -0.55 | 3.031 | 0.37757 | 0.70170 | |
| RegionR5 | -0.252 | 3.031 | 0.55863 | 0.91865 | |
| RegionR6 | 0.52 | 3.031 | 0.26946 | 0.85819 | |
| RegionR7 | -1.355 | 3.031 | 0.08170 | 0.55000 | |
| RegionR8 | -0.054 | 3.031 | 0.94198 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.121 | 3.031 | 0.18422 | 0.92473 | |
| RegenerationR2 | 0.072 | 3.031 | 0.89994 | 1.00000 | |
| RegenerationR3 | 0.24 | 3.031 | 0.69346 | 0.94568 | |
| RegenerationR4 | 0.171 | 3.031 | 0.78224 | 0.98164 | |
| RegenerationR5 | 0.287 | 3.031 | 0.59893 | 0.90957 | |
| RegenerationR6 | -1.498 | 3.031 | 0.03675 | 0.23936 | |
| RegenerationBL | -0.685 | 3.031 | 0.51999 | 0.88199 | |
| RegenerationTP | 0.724 | 3.031 | 0.40834 | 0.83535 |
Genes with expression patterns similar to MligTC455_39673
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39673 | 301 | 6.27 | Mlig455_032019 | Neo: - Age: logFC(26M/2M)=-0.502 |
RAP2B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032019 {REF} {Length: 2377} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=185.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=72.2]; ADP-ribosylation factor family [PF00025.23, score=38.3]; RsgA GTPase [PF03193.18, score=26.7]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.7]} {Human: ENSG00000181467, RAP2B, RAP2B, member of RAS oncogene family, [Score=214, Expect=4e-71]; ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=214, Expect=3e-71]; ENSG00000123728, RAP2C, RAP2C, member of RAS oncogene family, [Score=209, Expect=4e-69]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=209, Expect=4e-69]; ENSG00000125249, RAP2A, RAP2A, member of RAS oncogene family, [Score=206, Expect=4e-68]} {Mouse: ENSMUSG00000051615, Rap2a, RAS related protein 2a, [Score=215, Expect=7e-72]; ENSMUSG00000036894, Rap2b, RAP2B, member of RAS oncogene family, [Score=214, Expect=3e-71]; ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=214, Expect=2e-71]; ENSMUSG00000050029, Rap2c, RAP2C, member of RAS oncogene family, [Score=209, Expect=2e-69]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=209, Expect=3e-69]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [Score=208, Expect=4e-69]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [RH, Score=222, Expect=1e-74]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=207, Expect=9e-69]} {RNA1509_19937} {RNA1310_3952} {RNA815_8102} |
| 2. | MligTC455_33643 | 101 | 2.11 | Mlig455_027040 | Neo: - Age: Down-Up-Up |
FYN | 1.655 | - | - | 0.704 | - | - | 0.951 | Mlig455_027040 {REF} {Length: 3809} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=278.3]; Protein kinase domain [PF00069.27, score=160.7]; SH3 domain [PF00018.30, score=46.9]; Variant SH3 domain [PF14604.8, score=36.5]; SH2 domain [PF00017.26, score=34.2]; Variant SH3 domain [PF07653.19, score=28.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=330, Expect=3e-105]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=325, Expect=5e-104]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=324, Expect=3e-103]; ENSG00000111816, FRK, fyn related Src family tyrosine kinase, [Score=323, Expect=5e-103]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=318, Expect=2e-101]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=329, Expect=4e-105]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=325, Expect=2e-103]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=322, Expect=8e-103]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=317, Expect=8e-101]; ENSMUSG00000019779, Frk, fyn-related kinase, [Score=317, Expect=1e-100]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=333, Expect=3e-107]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=319, Expect=1e-101]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [Score=413, Expect=3e-138]} {RNA1509_9783} {RNA1310_3966.1, RNA1509_9783} {RNA1509_9783, RNA815_6224} |
| 3. | MligTC455_12654 | 82 | 1.72 | Mlig455_019923 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_019923 {REF} {Length: 853} {RNA1509_54363} {RNA1310_57594, RNA1509_54363} {RNA1509_54363, RNA815_31588} | |
| 4. | MligTC455_41318 | 183 | 3.81 | Mlig455_061686 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_061686 {REF} {Length: 788} {TRANSSPLICED} {RNA1509_31046} {RNA1310_41579} {RNA815_19702} | |
| 5. | MligTC455_26206 | 322 | 6.7 | Mlig455_028076, Mlig455_028138, Mlig455_028270 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_028076 {REF} {Length: 925} {Pfam: Tetraspanin family [PF00335.22, score=35.6]} {RNA1310_3367.2} {RNA815_14447} Mlig455_028138 {REF} {Length: 3873} {Pfam: Tetraspanin family [PF00335.22, score=76.9]; Protein of unknown function (DUF4011) [PF13195.8, score=19.5]} {RNA1509_38062} {RNA1310_34407} {RNA815_14447} Mlig455_028270 {REF} {Length: 3287} {Pfam: Tetraspanin family [PF00335.22, score=41.0]} {RNA1509_38062} {RNA1310_3367.1} {RNA815_14447} |
|
| 6. | MligTC455_21523 | 317 | 6.61 | Mlig455_029394 | Neo: - Age: - Region-enriched R6: 2.246/0.01608 Regeneration-downregulated R6: -3.517 Regeneration-depleted R6: -3.517 |
MYL4 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_029394 {REF} {Length: 861} {Pfam: EF-hand domain pair [PF13499.8, score=40.0]; EF hand [PF00036.34, score=25.2]; EF-hand domain pair [PF13833.8, score=24.8]; EF-hand domain [PF13405.8, score=22.4]} {Human: ENSG00000198336, MYL4, myosin light chain 4, [Score=57.4, Expect=7e-10]; ENSG00000160808, MYL3, myosin light chain 3, [Score=55.5, Expect=4e-09]} {Mouse: ENSMUSG00000059741, Myl3, myosin, light polypeptide 3, [Score=57.4, Expect=5e-10]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=56.6, Expect=7e-10]} {Dmel: FBgn0004687, Mlc-c, Myosin light chain cytoplasmic, [Score=70.1, Expect=3e-15]} {Celegans: WBGene00011734, mlc-5, Myosin-2 essential light chain, [Score=61.6, Expect=3e-12]} {Smed: dd_Smed_v6_20435_0_1, dd_Smed_v6_20435_0_1, [Score=48.5, Expect=6e-07]} {RNA1509_43205} {RNA1310_45370, RNA1509_43205} {RNA1509_43205, RNA815_24120.1} |
| 7. | MligTC455_51413 | 414 | 8.63 | Mlig455_025235 | Neo: - Age: logFC(26M/2M)=0.368 |
CTH | 0.95 | - | - | - | - | 0.950 | - | Mlig455_025235 {REF} {Length: 1605} {TRANSSPLICED} {Pfam: Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=442.5]; Methionine gamma-lyase [PF06838.13, score=17.2]} {Human: ENSG00000116761, CTH, cystathionine gamma-lyase, [RH, Score=411, Expect=1e-140]} {Mouse: ENSMUSG00000028179, Cth, cystathionase (cystathionine gamma-lyase), [RH, Score=423, Expect=1e-145]} {Dmel: FBgn0000566, Eip55E, [RH, Score=427, Expect=3e-147]} {Celegans: WBGene00022856, cth-2, Putative cystathionine gamma-lyase 2, [RH, Score=419, Expect=3e-144]} {Smed: dd_Smed_v6_2859_0_1, dd_Smed_v6_2859_0_1, [RH, Score=402, Expect=2e-137]} {RNA1509_28820} {RNA1310_16713} {RNA815_6828.1} |
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