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Results for MligTC455_12744

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12744 227 4.72 Mlig455_039893

Neo: Irradiation

Age: Down-Up-Down

 PHRF1 Mlig455_039893 {REF} {Length: 4208} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=47.9]; Ring finger domain [PF13639.8, score=42.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; PHD-finger [PF13831.8, score=18.9]} {Human: ENSG00000070047, PHRF1, PHD and ring finger domains 1, [RH, Score=122, Expect=1e-27]; ENSG00000274780, PHRF1, PHD and ring finger domains 1, [RH, Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000038611, Phrf1, PHD and ring finger domains 1, [RH, Score=118, Expect=2e-26]} {Dmel: FBgn0037344, CG2926, [RH, Score=110, Expect=5e-24]} {Celegans: WBGene00001470, baz-2, Bromodomain Adjacent to Zinc finger domain, 2A/2B, homolog, [Score=58.9, Expect=1e-08]} {Smed: dd_Smed_v6_12548_0_1, dd_Smed_v6_12548_0_1, [RH, Score=132, Expect=3e-31]} {RNA1509_14891} {RNA1310_3964.1, RNA1509_14891} {RNA1509_14891, RNA815_13171}

Cumulative graph for MligTC455_12744

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.145 2.944 0.08770 0.63979
RegionR2 2.093 2.944 0.01212 0.11337
RegionR3 -0.162 2.944 0.79583 1.00000
RegionR4 -1.853 2.944 0.03277 0.14455
RegionR5 0.666 2.944 0.22138 0.52360
RegionR6 0.038 2.944 0.95554 1.00000
RegionR7 1.177 2.944 0.13205 0.68468
RegionR8 1.186 2.944 0.22200 0.82993

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.913 2.944 0.81921 1.00000
RegenerationR2 -0.974 2.944 0.20435 0.65122
RegenerationR3 0.397 2.944 0.61707 0.91554
RegenerationR4 0.831 2.944 0.29648 0.73891
RegenerationR5 0.237 2.944 0.67107 0.94139
RegenerationR6 1.009 2.944 0.20564 0.54799
RegenerationBL -4.692 2.944 0.04794 0.25102
RegenerationTP 0.308 2.944 0.74107 1.00000


Genes with expression patterns similar to MligTC455_12744

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12744 227 4.72 Mlig455_039893

Neo: Irradiation

Age: Down-Up-Down

 PHRF1 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_039893 {REF} {Length: 4208} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=47.9]; Ring finger domain [PF13639.8, score=42.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; PHD-finger [PF13831.8, score=18.9]} {Human: ENSG00000070047, PHRF1, PHD and ring finger domains 1, [RH, Score=122, Expect=1e-27]; ENSG00000274780, PHRF1, PHD and ring finger domains 1, [RH, Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000038611, Phrf1, PHD and ring finger domains 1, [RH, Score=118, Expect=2e-26]} {Dmel: FBgn0037344, CG2926, [RH, Score=110, Expect=5e-24]} {Celegans: WBGene00001470, baz-2, Bromodomain Adjacent to Zinc finger domain, 2A/2B, homolog, [Score=58.9, Expect=1e-08]} {Smed: dd_Smed_v6_12548_0_1, dd_Smed_v6_12548_0_1, [RH, Score=132, Expect=3e-31]} {RNA1509_14891} {RNA1310_3964.1, RNA1509_14891} {RNA1509_14891, RNA815_13171}
2. MligTC455_52963 94 1.95 Mlig455_019424, Mlig455_058390

Neo: Int S/G2/M

Age: -

 ZC3H3 1.677 - - 0.958 - 0.719 -

Mlig455_019424 {REF} {Length: 3114} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=23.1]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [RH, Score=95.9, Expect=7e-21]} {Mouse: ENSMUSG00000075600, Zc3h3, zinc finger CCCH type containing 3, [RH, Score=100, Expect=2e-22]} {Dmel: FBgn0035900, ZC3H3, [RH, Score=67.0, Expect=9e-12]} {RNA1509_37082} {RNA1310_10963.2} {RNA815_18673}

Mlig455_058390 {REF} {Length: 2783} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.1]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [RH, Score=96.3, Expect=6e-21]} {Mouse: ENSMUSG00000075600, Zc3h3, zinc finger CCCH type containing 3, [RH, Score=99.8, Expect=3e-22]} {Dmel: FBgn0035900, ZC3H3, [RH, Score=67.4, Expect=6e-12]} {RNA1509_34328} {RNA1310_10963.2} {RNA815_18673}
3. MligTC455_35686 65 1.36 Mlig455_038919

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_038919 {REF} {Length: 2464} {RNA1509_23775} {RNA1310_8867} {RNA815_5748.1}
4. MligTC455_37748 123 2.56 Mlig455_012702, Mlig455_033010

Neo: -

Age: -

 0.98 - - 0.980 - - -

Mlig455_012702 {REF} {Length: 2807} {Smed: dd_Smed_v6_32414_0_1, dd_Smed_v6_32414_0_1, [Score=87.0, Expect=4e-18]} {RNA1509_52343} {RNA1310_5679} {RNA815_10252}

Mlig455_033010 {REF} {Length: 3464} {Smed: dd_Smed_v6_13730_0_1, dd_Smed_v6_13730_0_1, [Score=174, Expect=4e-45]} {RNA1509_52343} {RNA1310_5679} {RNA815_10252}
5. MligTC455_14824 13 0.26 Mlig455_010581

Neo: -

Age: -

 0.976 - - 0.976 - - - Mlig455_010581 {REF} {Length: 861}
6. MligTC455_36815 42 0.88 Mlig455_027859

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.807

 TRPM3 0.973 - - 0.973 - - - Mlig455_027859 {REF} {Length: 5435} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=93.4]; Ankyrin repeats (many copies) [PF13637.8, score=66.4]; Ankyrin repeats (many copies) [PF13857.8, score=50.5]; Ankyrin repeat [PF13606.8, score=40.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=77.8, Expect=2e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=79.0, Expect=6e-14]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=77.0, Expect=2e-13]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=63.9, Expect=1e-09]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=80.5, Expect=1e-14]} {Smed: dd_Smed_v6_13669_0_1, dd_Smed_v6_13669_0_1, [Score=84.0, Expect=5e-16]} {RNA1509_30268} {RNA1310_2381} {RNA815_861}
7. MligTC455_39812 95 1.98 Mlig455_045935

Neo: -

Age: -

 SLC17A8 0.972 - - 0.972 - - - Mlig455_045935 {REF} {Length: 3220} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_38152} {RNA1310_33327} {RNA815_25224}
8. MligTC455_27329 53 1.1 Mlig455_027779, Mlig455_063482

Neo: -

Age: Down-Down-Down

 0.97 - - 0.970 - - -

Mlig455_027779 {REF} {Length: 621} {NoTransDecoderORF} {RNA1310_134251} {RNA815_21359}

Mlig455_063482 {REF} {Length: 3434} {Pfam: TIR domain [PF13676.8, score=60.3]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=140, Expect=2e-34]} {RNA1509_39812} {RNA1310_13757.1} {RNA815_21359}
9. MligTC455_49482 141 2.93 Mlig455_025488, Mlig455_025510

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.130

Region-enriched R7: 2.725/0.03700

 0.97 - - 0.970 - - -

Mlig455_025488 {REF} {Length: 729} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [Score=65.1, Expect=8e-15]} {RNA1509_30340} {RNA1310_59879} {RNA815_30690}

Mlig455_025510 {REF} {Length: 553} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [Score=65.1, Expect=8e-15]} {RNA1509_30340} {RNA1310_59879} {RNA815_30690}
10. MligTC455_30194 58 1.22 Mlig455_047404

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_047404 {REF} {Length: 4134} {TRANSSPLICED} {RNA1509_13168} {RNA1310_10284} {RNA815_5087}
11. MligTC455_51212 300 6.24 Mlig455_007565, Mlig455_030549

Neo: -

Age: -

 PROX1 0.965 - - 0.965 - - -

Mlig455_007565 {REF} {Length: 7078} {Pfam: Homeo-prospero domain [PF05044.14, score=269.2]} {Human: ENSG00000117707, PROX1, prospero homeobox 1, [RH, Score=227, Expect=2e-64]} {Mouse: ENSMUSG00000010175, Prox1, prospero homeobox 1, [RH, Score=227, Expect=2e-64]; ENSMUSG00000042320, Prox2, prospero homeobox 2, [RH, Score=221, Expect=2e-63]} {Dmel: FBgn0004595, pros, prospero, [RH, Score=280, Expect=4e-81]} {Celegans: WBGene00000448, pros-1, Homeobox protein prospero homolog 1, [RH, Score=238, Expect=6e-70]} {Smed: dd_Smed_v6_13772_0_1, dd_Smed_v6_13772_0_1, [RH, Score=210, Expect=1e-60]} {RNA1509_45128} {RNA1310_18498.1, RNA1509_45128} {RNA1509_45128, RNA815_23560}

Mlig455_030549 {REF} {Length: 3353} {Pfam: Homeo-prospero domain [PF05044.14, score=268.4]} {Human: ENSG00000117707, PROX1, prospero homeobox 1, [RH, Score=228, Expect=6e-63]} {Mouse: ENSMUSG00000010175, Prox1, prospero homeobox 1, [RH, Score=227, Expect=5e-63]; ENSMUSG00000042320, Prox2, prospero homeobox 2, [RH, Score=221, Expect=7e-62]} {Dmel: FBgn0004595, pros, prospero, [RH, Score=282, Expect=2e-79]} {Celegans: WBGene00000448, pros-1, Homeobox protein prospero homolog 1, [RH, Score=239, Expect=1e-68]} {Smed: dd_Smed_v6_13772_0_1, dd_Smed_v6_13772_0_1, [RH, Score=211, Expect=1e-59]} {RNA1509_45128} {RNA1310_18498.1} {RNA815_23560}
12. MligTC455_50092 140 2.92 Mlig455_041942

Neo: Irradiation

Age: -

 RNF216 0.964 - - 0.964 - - - Mlig455_041942 {REF} {Length: 2906} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=26.8]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=176, Expect=1e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=173, Expect=5e-45]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=61.6, Expect=1e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=68.9, Expect=5e-12]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=63.9, Expect=1e-10]} {RNA1509_15865} {RNA1310_11127, RNA1509_15865} {RNA1509_15865, RNA815_4010.1}
13. MligTC455_41930 202 4.2 Mlig455_020366, Mlig455_020425

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.811

 MAP3K19 0.961 - - 0.961 - - -

Mlig455_020366 {REF} {Length: 1403} {Pfam: Protein kinase domain [PF00069.27, score=198.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.9]; Fungal protein kinase [PF17667.3, score=21.9]; ABC1 atypical kinase-like domain [PF03109.18, score=20.5]; Kinase-like [PF14531.8, score=20.3]; Phosphotransferase enzyme family [PF01636.25, score=19.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=133, Expect=3e-35]; ENSG00000163482, STK36, serine/threonine kinase 36, [Score=131, Expect=2e-36]; ENSG00000095015, MAP3K1, mitogen-activated protein kinase kinase kinase 1, [Score=127, Expect=1e-32]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=134, Expect=1e-35]; ENSMUSG00000073457, Smok2b, sperm motility kinase 2B, [Score=133, Expect=1e-35]; ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [Score=132, Expect=1e-34]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=122, Expect=3e-31]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=127, Expect=3e-33]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=122, Expect=2e-33]} {RNA1310_30984} {RNA815_35372}

Mlig455_020425 {REF} {Length: 1227} {Pfam: Protein kinase domain [PF00069.27, score=146.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=114, Expect=1e-28]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=101, Expect=4e-24]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=102, Expect=9e-25]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=95.1, Expect=3e-23]} {RNA1310_30984} {RNA815_35372}
14. MligTC455_33992 126 2.62 Mlig455_022511

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.421

Region-specific R4: 6.174

 0.959 - - - - 0.959 - Mlig455_022511 {REF} {Length: 5447} {RNA1509_15103} {RNA1310_4294.1} {RNA815_17182}
15. MligTC455_47768 38 0.79 Mlig455_034040

Neo: -

Age: -

 CHRNA3 0.954 - - 0.954 - - - Mlig455_034040 {REF} {Length: 2559} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.2]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=25.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=139, Expect=1e-36]; ENSG00000275917, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=4e-37]; ENSG00000166664, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=8e-37]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=3e-36]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=1e-36]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=138, Expect=3e-36]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=135, Expect=5e-35]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=142, Expect=7e-38]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=136, Expect=2e-35]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=135, Expect=2e-35]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=160, Expect=3e-44]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=144, Expect=1e-38]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=149, Expect=3e-40]} {RNA1310_10964.1} {RNA815_16260.1}
16. MligTC455_52196 902 18.79 Mlig455_058288

Neo: Irradiation

Age: -

Regeneration-depleted BL: -2.377
Regeneration-depleted R6: -1.363

 0.951 - - - - - 0.951 Mlig455_058288 {REF} {Length: 1745} {RNA1509_45448} {RNA1310_10531.1} {RNA815_1622}

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