Data search


search
Exact
Search

Results for MligTC455_13360

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13360 645 13.43 Mlig455_024715

Neo: -

Age: -

Mlig455_024715 {REF} {Length: 1887} {TRANSSPLICED} {RNA1509_18800} {RNA1310_27847.2} {RNA815_23363}

Cumulative graph for MligTC455_13360

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.179 4.09 0.21039 0.84997
RegionR2 -0.4 4.09 0.34610 0.73830
RegionR3 0.381 4.09 0.23814 0.77999
RegionR4 0.968 4.09 0.02092 0.10539
RegionR5 0.22 4.09 0.47342 0.83641
RegionR6 -0.102 4.09 0.76705 1.00000
RegionR7 -0.904 4.09 0.06920 0.50565
RegionR8 -1.341 4.09 0.03473 0.36575

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.468 4.09 0.04190 0.67581
RegenerationR2 -0.269 4.09 0.46279 0.85382
RegenerationR3 -0.431 4.09 0.25602 0.69022
RegenerationR4 -0.501 4.09 0.21645 0.66354
RegenerationR5 0.892 4.09 0.00954 0.17457
RegenerationR6 -0.215 4.09 0.61235 0.87545
RegenerationBL 0.046 4.09 0.94088 1.00000
RegenerationTP 0.679 4.09 0.24933 0.69644


Genes with expression patterns similar to MligTC455_13360

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13360 645 13.43 Mlig455_024715

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_024715 {REF} {Length: 1887} {TRANSSPLICED} {RNA1509_18800} {RNA1310_27847.2} {RNA815_23363}
2. MligTC455_38302 1233 25.69 Mlig455_046423, Mlig455_046438, Mlig455_046466

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.356/0.00306

1.769 - - - 0.963 - 0.806

Mlig455_046423 {REF} {Length: 509} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.8]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789} {RNA1310_68484} {RNA815_35591}

Mlig455_046438 {REF} {Length: 537} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.0]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789} {RNA1310_68484} {RNA815_35591}

Mlig455_046466 {REF} {Length: 538} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.0]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789, RNA1509_41299} {RNA1310_68484, RNA1509_18789, RNA1509_41299} {RNA1509_18789, RNA1509_41299, RNA815_35591}
3. MligTC455_46508 553 11.53 Mlig455_039158

Neo: -

Age: -

Region-enriched R4: 3.087/0.02676

1.719 - - - 0.769 - 0.950 Mlig455_039158 {REF} {Length: 2537} {Pfam: Lysosomal transcription factor, NCU-G1 [PF15065.8, score=241.7]} {Smed: dd_Smed_v6_2685_0_1, dd_Smed_v6_2685_0_1, [RH, Score=139, Expect=1e-36]} {RNA1509_23056, RNA1509_24004, RNA1509_36817, RNA1509_7566} {RNA1310_18836, RNA1509_23056, RNA1509_24004, RNA1509_36817} {RNA1509_23056, RNA1509_24004, RNA1509_36817, RNA815_9023}
4. MligTC455_24048 3092 64.42 Mlig455_008833, Mlig455_008935

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.252

HYPK 1.717 - - - 0.964 - 0.753

Mlig455_008833 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10390, RNA1509_54479} {RNA1310_31866, RNA1509_10390, RNA1509_54479} {RNA1509_10390, RNA1509_54479, RNA815_38606}

Mlig455_008935 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10375, RNA1509_10390} {RNA1310_31866, RNA1509_10375} {RNA1509_10375, RNA815_38606}
5. MligTC455_22324 507 10.57 Mlig455_007036

Neo: -

Age: -

Region-enriched R5: 2.145/0.00033

1.701 - - - - 0.955 0.746 Mlig455_007036 {REF} {Length: 1833} {TRANSSPLICED} {RNA1509_22840, RNA1509_40911} {RNA1310_17288, RNA1509_22840, RNA1509_40911} {RNA1509_22840, RNA1509_40911, RNA815_6634}
6. MligTC455_19167 737 15.35 Mlig455_009115

Neo: -

Age: Up-Up-Down

KCTD2 1.695 - - - 0.972 - 0.723 Mlig455_009115 {REF} {Length: 2259} {Pfam: BTB/POZ domain [PF02214.24, score=81.5]} {Human: ENSG00000180901, KCTD2, potassium channel tetramerization domain containing 2, [RH, Score=221, Expect=9e-72]; ENSG00000167977, KCTD5, potassium channel tetramerization domain containing 5, [RH, Score=216, Expect=3e-70]} {Mouse: ENSMUSG00000016940, Kctd2, potassium channel tetramerisation domain containing 2, [RH, Score=218, Expect=1e-70]; ENSMUSG00000016946, Kctd5, potassium channel tetramerisation domain containing 5, [RH, Score=216, Expect=2e-70]} {Dmel: FBgn0025394, inc, insomniac, [RH, Score=191, Expect=1e-60]} {Celegans: WBGene00016871, inso-1, INSOmniac (Drosophila sleep affecting) homolog, [RH, Score=177, Expect=6e-55]} {Smed: dd_Smed_v6_1496_0_1, dd_Smed_v6_1496_0_1, [RH, Score=194, Expect=2e-62]} {RNA1509_12968, RNA1509_57908} {RNA1310_5197.1, RNA1509_12968, RNA1509_57908} {RNA1509_12968, RNA1509_57908, RNA815_17009}
7. MligTC455_42163 1246 25.95 Mlig455_048416

Neo: Int S/G2/M

Age: Down-Down-Up

DR1 1.677 - - - 0.968 - 0.709 Mlig455_048416 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA1509_7108} {RNA1310_37108, RNA1509_14024, RNA1509_24840, RNA1509_26197} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA815_17293}
8. MligTC455_52414 166 3.45 Mlig455_002593

Neo: -

Age: Up-Down-Down

1.674 - - - 0.724 - 0.950 Mlig455_002593 {REF} {Length: 2578} {RNA1509_42741} {RNA1310_20005.1, RNA1509_42741} {RNA1509_42741, RNA815_31480}
9. MligTC455_35984 419 8.73 Mlig455_015119, Mlig455_015239

Neo: Int S/G2/M

Age: -

Region-enriched R2: 2.401/0.00423

0.968 - - - - - 0.968

Mlig455_015119 {REF} {Length: 4661} {Pfam: TATA box binding protein associated factor (TAF) [PF02969.19, score=45.0]} {RNA1509_15017} {RNA1310_6705} {RNA815_9564}

Mlig455_015239 {REF} {Length: 3384} {Pfam: TATA box binding protein associated factor (TAF) [PF02969.19, score=45.0]} {RNA1509_15017} {RNA1310_6705, RNA1509_15017} {RNA1509_15017, RNA815_9564}
10. MligTC455_44726 315 6.57 Mlig455_010903

Neo: -

Age: -

CLCN3 0.963 - - 0.963 - - - Mlig455_010903 {REF} {Length: 3753} {Pfam: Voltage gated chloride channel [PF00654.22, score=265.7]; CBS domain [PF00571.30, score=45.5]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=695, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=679, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=662, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=696, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=677, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=690, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=642, Expect=0.0]} {RNA1509_27287} {RNA1310_201.2} {RNA815_18093}
11. MligTC455_18853 111 2.31 Mlig455_003980

Neo: -

Age: Down-Down-Down

Region-enriched R5: 2.394/0.01639

MRPL45 0.962 - - - - - 0.962 Mlig455_003980 {REF} {Length: 1097} {TRANSSPLICED} {Human: ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=4e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=73.9, Expect=1e-14]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.1, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=64.3, Expect=8e-12]} {RNA1509_6788} {RNA1310_30839} {RNA815_14208}
12. MligTC455_19372 108 2.25 Mlig455_040134

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_040134 {REF} {Length: 760} {NoTransDecoderORF} {RNA1509_49196} {RNA1310_22309.2} {RNA815_54078}
13. MligTC455_16490 190 3.95 Mlig455_050433

Neo: -

Age: -

ADO 0.961 - - - - - 0.961 Mlig455_050433 {REF} {Length: 2970} {TRANSSPLICED} {Pfam: PCO_ADO [PF07847.14, score=155.2]} {Human: ENSG00000181915, ADO, 2-aminoethanethiol dioxygenase, [RH, Score=121, Expect=1e-32]} {Mouse: ENSMUSG00000116486, Ado, 2-aminoethanethiol (cysteamine) dioxygenase, [RH, Score=124, Expect=5e-34]; ENSMUSG00000057134, Ado, 2-aminoethanethiol (cysteamine) dioxygenase, [RH, Score=124, Expect=5e-34]} {Dmel: FBgn0035839, CG7550, [RH, Score=109, Expect=8e-29]} {Celegans: WBGene00021750, Y50D4C.6, [Score=45.8, Expect=8e-06]} {Smed: dd_Smed_v6_6833_0_1, dd_Smed_v6_6833_0_1, [RH, Score=215, Expect=1e-69]} {RNA1509_36208, RNA1509_48961} {RNA1310_34291, RNA1509_36208, RNA1509_48961} {RNA1509_36208, RNA1509_48961, RNA815_17054}
14. MligTC455_48944 586 12.22 Mlig455_000665

Neo: Int S/G2/M

Age: Down-Up-Up

UTP14C 0.961 - - - - - 0.961 Mlig455_000665 {REF} {Length: 2682} {TRANSSPLICED} {Pfam: Utp14 protein [PF04615.15, score=289.8]} {Human: ENSG00000253797, UTP14C, UTP14C, small subunit processome component, [RH, Score=96.7, Expect=4e-20]; ENSG00000156697, UTP14A, UTP14A, small subunit processome component, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000079470, Utp14b, UTP14B small subunit processome component, [RH, Score=94.7, Expect=1e-19]} {Dmel: FBgn0036514, CG12301, [RH, Score=80.5, Expect=2e-15]} {Celegans: WBGene00017855, F27C1.6, [RH, Score=108, Expect=2e-24]} {Smed: dd_Smed_v6_3884_0_2, dd_Smed_v6_3884_0_2, [RH, Score=145, Expect=2e-37]} {RNA1509_7201} {RNA1310_13072, RNA1509_7201} {RNA1509_7201, RNA815_10886}
15. MligTC455_37383 359 7.48 Mlig455_024630

Neo: -

Age: -

0.96 - - - 0.960 - - Mlig455_024630 {REF} {Length: 2395} {Pfam: Osteopetrosis-associated transmembrane protein 1 precursor [PF09777.11, score=133.8]} {RNA1509_46891} {RNA1310_17332, RNA1509_46891} {RNA1509_46891, RNA815_13588}
16. MligTC455_18104 454 9.45 Mlig455_039777

Neo: -

Age: -

SLC35C2 0.959 - - 0.959 - - - Mlig455_039777 {REF} {Length: 2871} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=71.9]; UAA transporter family [PF08449.13, score=35.9]; EamA-like transporter family [PF00892.22, score=22.3]} {Human: ENSG00000080189, SLC35C2, solute carrier family 35 member C2, [RH, Score=313, Expect=1e-104]} {Mouse: ENSMUSG00000017664, Slc35c2, solute carrier family 35, member C2, [RH, Score=298, Expect=9e-99]} {Dmel: FBgn0035449, CG14971, [RH, Score=275, Expect=1e-88]} {Celegans: WBGene00021637, Y47G6A.7, [Score=223, Expect=1e-69]} {Smed: dd_Smed_v6_10022_0_1, dd_Smed_v6_10022_0_1, [Score=362, Expect=3e-124]} {RNA1509_11424} {RNA1310_9746, RNA1509_11424} {RNA1509_11424, RNA815_4547}
17. MligTC455_45547 1314 27.37 Mlig455_030172, Mlig455_030174, Mlig455_049258

Neo: -

Age: -

0.957 - - - 0.957 - -

Mlig455_030172 {REF} {Length: 362} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25532} {RNA1310_40056} {RNA815_24383.2}

Mlig455_030174 {REF} {Length: 361} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25532} {RNA1310_40056} {RNA815_24383.2}

Mlig455_049258 {REF} {Length: 360} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25532} {RNA1310_40056} {RNA815_24383.2}
18. MligTC455_22353 204 4.24 Mlig455_031527

Neo: -

Age: Down-Up-Down

EIF2B3 0.956 - - - - - 0.956 Mlig455_031527 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: MobA-like NTP transferase domain [PF12804.9, score=34.7]; Nucleotidyl transferase [PF00483.25, score=31.8]; Domain of unknown function (DUF4954) [PF16314.7, score=22.9]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.0]} {Human: ENSG00000070785, EIF2B3, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=125, Expect=1e-30]} {Mouse: ENSMUSG00000028683, Eif2b3, eukaryotic translation initiation factor 2B, subunit 3, [RH, Score=136, Expect=6e-35]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=143, Expect=2e-37]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.6, Expect=3e-13]} {RNA1509_30817, RNA1509_53347, RNA1509_58887} {RNA1310_17674, RNA1509_53347, RNA1509_58887} {RNA1509_53347, RNA1509_58887, RNA815_11116}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA