M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_22353

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22353 204 4.24 Mlig455_031527

Neo: -

Age: Down-Up-Down

 EIF2B3 Mlig455_031527 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: MobA-like NTP transferase domain [PF12804.9, score=34.7]; Nucleotidyl transferase [PF00483.25, score=31.8]; Domain of unknown function (DUF4954) [PF16314.7, score=22.9]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.0]} {Human: ENSG00000070785, EIF2B3, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=125, Expect=1e-30]} {Mouse: ENSMUSG00000028683, Eif2b3, eukaryotic translation initiation factor 2B, subunit 3, [RH, Score=136, Expect=6e-35]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=143, Expect=2e-37]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.6, Expect=3e-13]} {RNA1509_30817, RNA1509_53347, RNA1509_58887} {RNA1310_17674, RNA1509_53347, RNA1509_58887} {RNA1509_53347, RNA1509_58887, RNA815_11116}

Cumulative graph for MligTC455_22353

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.554 2.649 0.03714 0.47360
RegionR2 1.132 2.649 0.32665 0.71887
RegionR3 0.82 2.649 0.39570 0.92549
RegionR4 -0.807 2.649 0.98005 1.00000
RegionR5 1.768 2.649 0.01788 0.08918
RegionR6 0.976 2.649 0.31132 0.90125
RegionR7 0.818 2.649 0.46162 1.00000
RegionR8 2.847 2.649 0.00304 0.09571

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 8.627 2.649 0.04658 0.68511
RegenerationR2 -0.179 2.649 0.82308 0.99583
RegenerationR3 -0.497 2.649 0.55943 0.88832
RegenerationR4 0.707 2.649 0.39563 0.81041
RegenerationR5 -0.085 2.649 0.93138 1.00000
RegenerationR6 0.322 2.649 0.68633 0.91733
RegenerationBL -5.258 2.649 0.01821 0.14491
RegenerationTP -1.045 2.649 0.35257 0.79388


Genes with expression patterns similar to MligTC455_22353

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22353 204 4.24 Mlig455_031527

Neo: -

Age: Down-Up-Down

 EIF2B3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031527 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: MobA-like NTP transferase domain [PF12804.9, score=34.7]; Nucleotidyl transferase [PF00483.25, score=31.8]; Domain of unknown function (DUF4954) [PF16314.7, score=22.9]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.0]} {Human: ENSG00000070785, EIF2B3, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=125, Expect=1e-30]} {Mouse: ENSMUSG00000028683, Eif2b3, eukaryotic translation initiation factor 2B, subunit 3, [RH, Score=136, Expect=6e-35]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=143, Expect=2e-37]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.6, Expect=3e-13]} {RNA1509_30817, RNA1509_53347, RNA1509_58887} {RNA1310_17674, RNA1509_53347, RNA1509_58887} {RNA1509_53347, RNA1509_58887, RNA815_11116}
2. MligTC455_42764 351 7.31 Mlig455_031291, Mlig455_031338

Neo: -

Age: -

Region-enriched R4: 2.254/0.02916
Region-enriched R5: 2.042/0.00169

 ALDH16A1 2.602 0.811 - 0.970 - - 0.821

Mlig455_031291 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=65.1]} {Human: ENSG00000161618, ALDH16A1, aldehyde dehydrogenase 16 family member A1, [Score=54.3, Expect=6e-07]} {RNA1509_14483} {RNA1310_10423.1} {RNA815_28466}

Mlig455_031338 {REF} {Length: 2766} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=66.0]} {RNA1509_14483, RNA1509_19770} {RNA1310_10423.1, RNA1509_19770} {RNA1509_19770, RNA815_28466}
3. MligTC455_34241 554 11.54 Mlig455_015149, Mlig455_015272

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 4.046/0.00000

 2.545 0.782 - 0.956 0.807 - -

Mlig455_015149 {REF} {Length: 2087} {Pfam: Ring finger domain [PF13639.8, score=27.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.9]} {RNA1509_25884, RNA1509_42823} {RNA1310_27854, RNA1509_25884} {RNA1509_25884, RNA815_19077}

Mlig455_015272 {REF} {Length: 2224} {Pfam: Ring finger domain [PF13639.8, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.8]} {RNA1509_41828, RNA1509_42823, RNA1509_59901} {RNA1310_27854, RNA1509_41828, RNA1509_42823, RNA1509_59901} {RNA1509_41828, RNA1509_42823, RNA1509_59901, RNA815_19077}
4. MligTC455_52534 133 2.77 Mlig455_034618

Neo: Neoblast

Age: -

Region-enriched R5: 2.681/0.00356

 2.545 0.818 - 0.957 - - 0.770 Mlig455_034618 {REF} {Length: 3320} {TRANSSPLICED} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=54.7]} {RNA1509_16900} {RNA1310_7021} {RNA815_8245.1}
5. MligTC455_50863 512 10.66 Mlig455_049317

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.453/0.00018

 BAG3 2.478 - - 0.953 0.807 - 0.718 Mlig455_049317 {REF} {Length: 3111} {TRANSSPLICED} {Pfam: BAG domain [PF02179.18, score=59.3]; WW domain [PF00397.28, score=44.5]} {Human: ENSG00000151929, BAG3, BCL2 associated athanogene 3, [RH, Score=68.2, Expect=4e-13]} {Mouse: ENSMUSG00000030847, Bag3, BCL2-associated athanogene 3, [RH, Score=70.5, Expect=3e-14]} {Dmel: FBgn0086708, stv, starvin, [Score=52.8, Expect=3e-08]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [Score=50.4, Expect=2e-07]} {Smed: dd_Smed_v6_3939_0_1, dd_Smed_v6_3939_0_1, [RH, Score=105, Expect=5e-28]} {RNA1509_15383, RNA1509_20613, RNA1509_5513} {RNA1310_28133, RNA1509_15383, RNA1509_5513} {RNA1509_15383, RNA1509_5513, RNA815_20034}
6. MligTC455_41684 480 9.99 Mlig455_057340

Neo: Int S/G2/M

Age: -

Region-specific R5: 3.223

Region-enriched R5: 3.055/0.00000

 1.869 - - 0.906 0.963 - - Mlig455_057340 {REF} {Length: 4416} {TRANSSPLICED} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=40.5]; C2H2-type zinc finger [PF13894.8, score=29.6]} {RNA1509_19783, RNA1509_34761} {RNA1310_8051.2, RNA1509_19783, RNA1509_34761} {RNA1509_19783, RNA1509_34761, RNA815_21819}
7. MligTC455_50862 533 11.11 Mlig455_049311

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.415/0.00043

 BAG3 1.755 - - 0.953 0.802 - - Mlig455_049311 {REF} {Length: 3819} {Pfam: BAG domain [PF02179.18, score=59.3]; WW domain [PF00397.28, score=44.5]} {Human: ENSG00000151929, BAG3, BCL2 associated athanogene 3, [RH, Score=68.9, Expect=2e-13]} {Mouse: ENSMUSG00000030847, Bag3, BCL2-associated athanogene 3, [RH, Score=72.8, Expect=6e-15]} {Dmel: FBgn0086708, stv, starvin, [Score=53.1, Expect=2e-08]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [Score=50.1, Expect=2e-07]} {Smed: dd_Smed_v6_3939_0_1, dd_Smed_v6_3939_0_1, [RH, Score=104, Expect=6e-28]} {RNA1509_20613} {RNA1310_28133} {RNA815_20034}
8. MligTC455_33502 118 2.45 Mlig455_066566

Neo: Irradiation

Age: -

Region-enriched R5: 4.374/0.01034

 PPP1R3D 1.729 0.768 - 0.961 - - - Mlig455_066566 {REF} {Length: 2941} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.4]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=37.2]} {Human: ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=62.4, Expect=4e-10]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=69.7, Expect=8e-13]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [Score=66.2, Expect=2e-11]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=69.7, Expect=8e-13]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=82.4, Expect=1e-17]} {RNA1509_41702} {RNA1310_18084.1, RNA1509_41702} {RNA1509_41702, RNA815_7332}
9. MligTC455_12620 160 3.33 Mlig455_070214

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 3.712/0.00000
Region-enriched R6: 2.859/0.04343

 DLX1 1.723 0.773 - 0.950 - - - Mlig455_070214 {REF} {Length: 1717} {Pfam: Homeodomain [PF00046.31, score=70.3]} {Human: ENSG00000144355, DLX1, distal-less homeobox 1, [Score=116, Expect=6e-30]; ENSG00000006377, DLX6, distal-less homeobox 6, [Score=112, Expect=4e-28]} {Mouse: ENSMUSG00000041911, Dlx1, distal-less homeobox 1, [Score=116, Expect=4e-30]; ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [Score=112, Expect=3e-28]} {Dmel: FBgn0000157, Dll, Distal-less, [Score=115, Expect=2e-29]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [Score=92.4, Expect=2e-21]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [Score=115, Expect=2e-28]} {RNA1509_49028} {RNA1310_21466.1} {RNA815_13544.1}
10. MligTC455_34392 70 1.46 Mlig455_017963

Neo: Irradiation

Age: -

Region-enriched R5: 3.920/0.00338

 NYNRIN 1.719 - - 0.957 - 0.762 - Mlig455_017963 {REF} {Length: 6112} {Pfam: Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=55.8]; Integrase core domain [PF13683.8, score=23.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=104, Expect=1e-24]} {RNA1509_14638} {RNA1310_2007} {RNA815_7723.1}
11. MligTC455_41666 950 19.78 Mlig455_040292, Mlig455_040305

Neo: Int S/G2/M

Age: -

Region-specific R5: 2.075

Region-enriched R5: 1.515/0.00027

 MRPS22 1.71 0.750 - 0.960 - - -

Mlig455_040292 {REF} {Length: 2290} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S22 [PF10245.11, score=170.2]} {Human: ENSG00000175110, MRPS22, mitochondrial ribosomal protein S22, [RH, Score=102, Expect=3e-24]} {Mouse: ENSMUSG00000032459, Mrps22, mitochondrial ribosomal protein S22, [RH, Score=104, Expect=7e-25]} {Dmel: FBgn0039555, mRpS22, mitochondrial ribosomal protein S22, [RH, Score=98.6, Expect=1e-22]} {Celegans: WBGene00007564, mrps-22, Mitochondrial Ribosomal Protein, Small, [RH, Score=88.6, Expect=4e-19]} {Smed: dd_Smed_v6_3296_0_1, dd_Smed_v6_3296_0_1, [RH, Score=117, Expect=4e-30]} {RNA1509_19002, RNA1509_21293, RNA1509_28067, RNA1509_44774} {RNA1310_16405.1, RNA1509_19002, RNA1509_21293, RNA1509_28067, RNA1509_44774} {RNA1509_19002, RNA1509_21293, RNA1509_28067, RNA1509_44774, RNA815_8452}

Mlig455_040305 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S22 [PF10245.11, score=169.9]} {Human: ENSG00000175110, MRPS22, mitochondrial ribosomal protein S22, [RH, Score=100, Expect=2e-23]} {Mouse: ENSMUSG00000032459, Mrps22, mitochondrial ribosomal protein S22, [RH, Score=103, Expect=2e-24]} {Dmel: FBgn0039555, mRpS22, mitochondrial ribosomal protein S22, [Score=92.4, Expect=2e-20]} {Celegans: WBGene00007564, mrps-22, Mitochondrial Ribosomal Protein, Small, [RH, Score=85.1, Expect=4e-18]} {Smed: dd_Smed_v6_3296_0_1, dd_Smed_v6_3296_0_1, [RH, Score=120, Expect=6e-31]} {RNA1509_21293} {RNA1310_16405.1} {RNA815_8452}
12. MligTC455_17193 104 2.17 Mlig455_067657

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 4.829/0.00000

 HRH1 1.684 0.711 - 0.973 - - - Mlig455_067657 {REF} {Length: 1665} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=238.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=32.7]; Olfactory receptor [PF13853.8, score=29.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=26.0]} {Human: ENSG00000196639, HRH1, histamine receptor H1, [Score=258, Expect=5e-80]} {Mouse: ENSMUSG00000053004, Hrh1, histamine receptor H1, [Score=259, Expect=1e-80]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=174, Expect=5e-47]} {Celegans: WBGene00017157, tyra-2, Tyramine receptor tyra-2, [Score=171, Expect=1e-47]} {Smed: dd_Smed_v6_15040_0_1, dd_Smed_v6_15040_0_1, [Score=170, Expect=6e-47]} {RNA1509_53354} {RNA1310_56071} {RNA815_31150}
13. MligTC455_19372 108 2.25 Mlig455_040134

Neo: -

Age: -

 1.674 - 0.720 - - - 0.954 Mlig455_040134 {REF} {Length: 760} {NoTransDecoderORF} {RNA1509_49196} {RNA1310_22309.2} {RNA815_54078}
14. MligTC455_51522 351 7.31 Mlig455_031155

Neo: Germline

Age: -

Region-enriched R5: 1.027/0.03506

 1.666 0.715 - 0.951 - - - Mlig455_031155 {REF} {Length: 570} {NoTransDecoderORF} {RNA1509_18315} {RNA1310_59635} {RNA815_9006}
15. MligTC455_49086 274 5.71 Mlig455_011515

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.627

Region-enriched R3: 2.565/0.00416
Region-enriched R5: 2.441/0.00091
Region-enriched R6: 2.339/0.03988

 RAC1 1.662 - - 0.952 - - 0.710 Mlig455_011515 {REF} {Length: 1740} {Pfam: Ras family [PF00071.24, score=159.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=69.7]; ADP-ribosylation factor family [PF00025.23, score=26.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=221, Expect=2e-73]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=218, Expect=1e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=217, Expect=4e-72]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=221, Expect=1e-73]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=217, Expect=3e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=217, Expect=3e-72]} {Dmel: FBgn0010333, Rac1, [Score=221, Expect=3e-74]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=226, Expect=5e-76]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=223, Expect=6e-75]} {RNA1509_17203} {RNA1310_15755.1} {RNA815_8276}
16. MligTC455_25961 551 11.47 Mlig455_044695

Neo: Irradiation

Age: logFC(26M/2M)=0.398

Region-specific R5: 2.330

Region-enriched R5: 2.061/0.00000

 DLL1 0.976 - - 0.976 - - - Mlig455_044695 {REF} {Length: 4222} {Pfam: EGF-like domain [PF00008.29, score=84.0]; Delta serrate ligand [PF01414.21, score=67.1]; EGF-like domain [PF07974.15, score=60.0]; Human growth factor-like EGF [PF12661.9, score=50.2]; N terminus of Notch ligand [PF07657.15, score=34.8]; Laminin EGF domain [PF00053.26, score=20.6]} {Human: ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [RH, Score=280, Expect=7e-83]; ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [RH, Score=280, Expect=7e-83]} {Mouse: ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=272, Expect=4e-80]} {Dmel: FBgn0000463, Dl, dorsal, [RH, Score=284, Expect=8e-84]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=137, Expect=1e-32]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [RH, Score=310, Expect=6e-92]} {RNA1509_17528} {RNA1310_7288} {RNA815_3267}
17. MligTC455_24355 537 11.18 Mlig455_004869, Mlig455_023628

Neo: -

Age: -

Region-enriched R8: 3.829/0.00148

 0.968 - - 0.968 - - -

Mlig455_004869 {REF} {Length: 1448} {RNA1509_54838} {RNA1310_110445} {RNA815_7764}

Mlig455_023628 {REF} {Length: 417} {NoTransDecoderORF} {RNA1509_54838} {RNA1310_48164} {RNA815_7764}
18. MligTC455_29311 38 0.79 Mlig455_036659

Neo: -

Age: -

Region-enriched R4: 5.181/0.01948
Region-enriched R5: 4.507/0.01647

 0.967 - - 0.967 - - - Mlig455_036659 {REF} {Length: 559} {TRANSSPLICED} {RNA1310_66594.1} {RNA815_40011}
19. MligTC455_47635 45 0.93 Mlig455_034448

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_034448 {REF} {Length: 1311} {TRANSSPLICED} {RNA1509_54998} {RNA1310_46094.1, RNA1509_54998} {RNA1509_54998, RNA815_22966}
20. MligTC455_32286 3807 79.31 Mlig455_002559, Mlig455_057911

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 2.115/0.00000
Region-enriched R4: 1.212/0.00801

 CKS1B 0.966 - - 0.966 - - -

Mlig455_002559 {REF} {Length: 2198} {Pfam: Cyclin-dependent kinase regulatory subunit [PF01111.21, score=112.6]} {Human: ENSG00000173207, CKS1B, CDC28 protein kinase regulatory subunit 1B, [RH, Score=106, Expect=3e-31]; ENSG00000123975, CKS2, CDC28 protein kinase regulatory subunit 2, [RH, Score=105, Expect=6e-31]} {Mouse: ENSMUSG00000028044, Cks1b, CDC28 protein kinase 1b, [RH, Score=106, Expect=2e-31]; ENSMUSG00000062248, Cks2, CDC28 protein kinase regulatory subunit 2, [RH, Score=105, Expect=4e-31]} {Dmel: FBgn0010314, Cks30A, Cyclin-dependent kinase subunit 30A, [RH, Score=108, Expect=3e-32]} {Celegans: WBGene00001051, cks-1, Cyclin-dependent kinases regulatory subunit, [RH, Score=106, Expect=2e-31]} {Smed: dd_Smed_v6_6668_0_1, dd_Smed_v6_6668_0_1, [RH, Score=116, Expect=2e-35]} {RNA1509_23202, RNA1509_41553} {RNA1310_34001, RNA1509_23202, RNA1509_41553} {RNA1509_23202, RNA1509_41553, RNA815_9413.1}

Mlig455_057911 {REF} {Length: 1044} {Pfam: Cyclin-dependent kinase regulatory subunit [PF01111.21, score=112.6]} {Human: ENSG00000173207, CKS1B, CDC28 protein kinase regulatory subunit 1B, [RH, Score=106, Expect=3e-31]; ENSG00000123975, CKS2, CDC28 protein kinase regulatory subunit 2, [RH, Score=105, Expect=6e-31]} {Mouse: ENSMUSG00000028044, Cks1b, CDC28 protein kinase 1b, [RH, Score=106, Expect=2e-31]; ENSMUSG00000062248, Cks2, CDC28 protein kinase regulatory subunit 2, [RH, Score=105, Expect=4e-31]} {Dmel: FBgn0010314, Cks30A, Cyclin-dependent kinase subunit 30A, [RH, Score=108, Expect=3e-32]} {Celegans: WBGene00001051, cks-1, Cyclin-dependent kinases regulatory subunit, [RH, Score=106, Expect=2e-31]} {Smed: dd_Smed_v6_6668_0_1, dd_Smed_v6_6668_0_1, [RH, Score=116, Expect=2e-35]} {RNA1509_11249, RNA1509_25658} {RNA1310_34001, RNA1509_11249, RNA1509_25658} {RNA1509_11249, RNA1509_25658, RNA815_16106.1}
21. MligTC455_15471 310 6.45 Mlig455_022527

Neo: Irradiation

Age: logFC(26M/2M)=0.502

Region-enriched R5: 3.024/0.00001

 CHEK1 0.964 - - 0.964 - - - Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053}
22. MligTC455_31781 93 1.93 Mlig455_026364

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_026364 {REF} {Length: 1923} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=22.1]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1}
23. MligTC455_19853 47 0.99 Mlig455_025243

Neo: Irradiation

Age: Down-Up-Down

 0.963 - - 0.963 - - - Mlig455_025243 {REF} {Length: 3097} {RNA1509_38454, RNA1509_49903} {RNA1310_26145, RNA1509_49903} {RNA1509_49903, RNA815_30913}
24. MligTC455_38353 94 1.97 Mlig455_058045

Neo: Irradiation

Age: logFC(26M/2M)=0.732

 0.963 - - 0.963 - - - Mlig455_058045 {REF} {Length: 1616} {RNA1509_37368} {RNA1310_24656} {RNA815_16237}
25. MligTC455_19403 1124 23.41 Mlig455_063580

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.151

Region-enriched R4: 3.026/0.00032
Region-enriched R5: 2.575/0.00009

 0.959 - - - - - 0.959 Mlig455_063580 {REF} {Length: 1957} {RNA1509_14629, RNA1509_37537} {RNA1310_2374.1, RNA1509_14629, RNA1509_37537} {RNA1509_14629, RNA1509_37537, RNA815_13234}
26. MligTC455_24356 148 3.08 Mlig455_035542

Neo: -

Age: -

Region-enriched R8: 4.891/0.00855

 0.958 - - 0.958 - - - Mlig455_035542 {REF} {Length: 484} {NoTransDecoderORF} {RNA1509_54838} {RNA1310_48164} {RNA815_7764}
27. MligTC455_33473 3434 71.55 Mlig455_021737

Neo: -

Age: -

Region-enriched R4: 1.082/0.00063

 FAAH2 0.958 - - - - 0.958 - Mlig455_021737 {REF} {Length: 3489} {TRANSSPLICED} {Pfam: Amidase [PF01425.23, score=220.5]} {Human: ENSG00000165591, FAAH2, fatty acid amide hydrolase 2, [RH, Score=429, Expect=5e-145]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=77.4, Expect=2e-14]} {Dmel: FBgn0033717, CG8839, [RH, Score=416, Expect=3e-140]} {Celegans: WBGene00013164, Y53F4B.18, [RH, Score=322, Expect=1e-103]} {Smed: dd_Smed_v6_4000_0_1, dd_Smed_v6_4000_0_1, [Score=115, Expect=3e-27]} {RNA1509_33776, RNA1509_3448, RNA1509_47706, RNA1509_50616, RNA1509_52761, RNA1509_7622} {RNA1310_10768, RNA1509_33776, RNA1509_3448, RNA1509_47706, RNA1509_50616, RNA1509_52761, RNA1509_7622} {RNA1509_33776, RNA1509_3448, RNA1509_47706, RNA1509_50616, RNA1509_52761, RNA1509_7622, RNA815_5476.1}
28. MligTC455_40397 306 6.37 Mlig455_042991

Neo: Int S/G2/M

Age: -

 UCHL3 0.958 - - - - - 0.958 Mlig455_042991 {REF} {Length: 2212} {Pfam: Ubiquitin carboxyl-terminal hydrolase, family 1 [PF01088.23, score=82.6]} {Human: ENSG00000118939, UCHL3, ubiquitin C-terminal hydrolase L3, [Score=107, Expect=1e-29]} {Mouse: ENSMUSG00000022111, Uchl3, ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase), [Score=108, Expect=8e-30]; ENSMUSG00000035337, Uchl4, ubiquitin carboxyl-terminal esterase L4, [Score=104, Expect=2e-28]} {Dmel: FBgn0010288, Uch, Ubiquitin carboxy-terminal hydrolase, [Score=90.1, Expect=6e-23]} {Celegans: WBGene00006722, ubh-2, Ubiquitin carboxyl-terminal hydrolase, [Score=48.9, Expect=1e-07]} {Smed: dd_Smed_v6_7488_0_1, dd_Smed_v6_7488_0_1, [Score=99.8, Expect=6e-27]} {RNA1509_16357, RNA1509_18201, RNA1509_7009} {RNA1310_32804, RNA1509_18201, RNA1509_7009} {RNA1509_18201, RNA1509_7009, RNA815_15587}
29. MligTC455_13360 645 13.43 Mlig455_024715

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_024715 {REF} {Length: 1887} {TRANSSPLICED} {RNA1509_18800} {RNA1310_27847.2} {RNA815_23363}
30. MligTC455_20612 255 5.31 Mlig455_030424

Neo: Neoblast, stringent

Age: -

 ERCC6L 0.956 - - 0.956 - - - Mlig455_030424 {REF} {Length: 4254} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=195.2]; Helicase conserved C-terminal domain [PF00271.33, score=68.3]; Type III restriction enzyme, res subunit [PF04851.17, score=30.0]} {Human: ENSG00000186871, ERCC6L, ERCC excision repair 6 like, spindle assembly checkpoint helicase, [RH, Score=677, Expect=0.0]} {Mouse: ENSMUSG00000051220, Ercc6l, excision repair cross-complementing rodent repair deficiency complementation group 6 like, [RH, Score=697, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [Score=268, Expect=1e-75]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=251, Expect=9e-68]} {Smed: dd_Smed_v6_11583_0_1, dd_Smed_v6_11583_0_1, [RH, Score=598, Expect=0.0]} {RNA1509_38674, RNA1509_46457} {RNA1310_2005, RNA1509_38674} {RNA1509_38674, RNA815_13735}
31. MligTC455_20987 1769 36.85 Mlig455_028383, Mlig455_035961

Neo: Irradiation

Age: -

Region-specific R5: 2.292

Region-enriched R5: 2.053/0.00000

 0.956 - - 0.956 - - -

Mlig455_028383 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.4]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142}

Mlig455_035961 {REF} {Length: 1098} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.1]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142}
32. MligTC455_17502 110 2.29 Mlig455_002690

Neo: -

Age: -

Region-enriched R3: 3.365/0.02107

 0.955 - - - - - 0.955 Mlig455_002690 {REF} {Length: 3248} {Pfam: Mucin-like glycoprotein [PF01456.19, score=23.9]} {RNA1509_41440} {RNA1310_26404.1} {RNA815_11074.1}
33. MligTC455_38264 310 6.46 Mlig455_039091

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.273/0.02550

 0.954 - - 0.954 - - - Mlig455_039091 {REF} {Length: 3275} {TRANSSPLICED} {RNA1509_45258} {RNA1310_7145} {RNA815_4240}
34. MligTC455_48944 586 12.22 Mlig455_000665

Neo: Int S/G2/M

Age: Down-Up-Up

 UTP14C 0.954 - - - - - 0.954 Mlig455_000665 {REF} {Length: 2682} {TRANSSPLICED} {Pfam: Utp14 protein [PF04615.15, score=289.8]} {Human: ENSG00000253797, UTP14C, UTP14C, small subunit processome component, [RH, Score=96.7, Expect=4e-20]; ENSG00000156697, UTP14A, UTP14A, small subunit processome component, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000079470, Utp14b, UTP14B small subunit processome component, [RH, Score=94.7, Expect=1e-19]} {Dmel: FBgn0036514, CG12301, [RH, Score=80.5, Expect=2e-15]} {Celegans: WBGene00017855, F27C1.6, [RH, Score=108, Expect=2e-24]} {Smed: dd_Smed_v6_3884_0_2, dd_Smed_v6_3884_0_2, [RH, Score=145, Expect=2e-37]} {RNA1509_7201} {RNA1310_13072, RNA1509_7201} {RNA1509_7201, RNA815_10886}
35. MligTC455_19854 378 7.87 Mlig455_025265, Mlig455_025622

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=0.717

Region-enriched R5: 6.171/0.00360

 0.951 - - 0.951 - - -

Mlig455_025265 {REF} {Length: 1672} {NoTransDecoderORF} {RNA1509_38454} {RNA1310_35139, RNA1509_38454} {RNA1509_38454, RNA815_28071}

Mlig455_025622 {REF} {Length: 691} {NoTransDecoderORF} {RNA1509_38454} {RNA1310_35139} {RNA815_28071}
36. MligTC455_24969 168 3.5 Mlig455_001371, Mlig455_001390

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.410

 0.95 - - - - - 0.950

Mlig455_001371 {REF} {Length: 2286} {RNA1509_19455} {RNA1310_20818} {RNA815_23612}

Mlig455_001390 {REF} {Length: 3512} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.3]; Zinc finger, C2H2 type [PF00096.28, score=21.2]; Cysteine rich domain with multizinc binding regions [PF17979.3, score=19.6]} {Dmel: FBgn0036725, CG18265, [RH, Score=62.8, Expect=8e-10]} {Celegans: WBGene00000995, die-1, Dorsal Intercalation and Elongation defect, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_34785_0_1, dd_Smed_v6_34785_0_1, [Score=106, Expect=3e-24]} {RNA1509_19455} {RNA1310_20818} {RNA815_23612}
37. MligTC455_31308 3230 67.28 Mlig455_000724, Mlig455_000725, Mlig455_012146, Mlig455_012148, Mlig455_016997, Mlig455_016998, Mlig455_031917, Mlig455_033315, Mlig455_033316, Mlig455_050631, Mlig455_061904, Mlig455_070557

Neo: -

Age: logFC(26M/2M)=-1.904

 0.95 - - - - - 0.950

Mlig455_000724 {REF} {Length: 827} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895, RNA1509_9941} {RNA1310_31663.1, RNA1509_9895, RNA1509_9941} {RNA1509_9895, RNA1509_9941, RNA815_17139}

Mlig455_000725 {REF} {Length: 848} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9941} {RNA1310_30928} {RNA815_17139}

Mlig455_012146 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139}

Mlig455_012148 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139}

Mlig455_016997 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139}

Mlig455_016998 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139}

Mlig455_031917 {REF} {Length: 842} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139}

Mlig455_033315 {REF} {Length: 813} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_033316 {REF} {Length: 813} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_050631 {REF} {Length: 848} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25759, RNA1509_9941} {RNA1310_30928, RNA1509_25759} {RNA1509_25759, RNA815_17139}

Mlig455_061904 {REF} {Length: 803} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_070557 {REF} {Length: 466} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9941} {RNA1310_38071} {RNA815_17139}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA