Data search


search
Exact
Search

Results for MligTC455_13742

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13742 20 0.41 Mlig455_046522

Neo: -

Age: -

Mlig455_046522 {REF} {Length: 1336} {RNA1310_97283}

Cumulative graph for MligTC455_13742

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.171 0.836 0.99981 1.00000
RegionR2 -0.373 0.836 0.96603 1.00000
RegionR3 -2.641 0.836 0.99988 1.00000
RegionR4 2.607 0.836 0.35179 0.67356
RegionR5 0.863 0.836 0.66792 1.00000
RegionR6 -1.579 0.836 0.98020 1.00000
RegionR7 1.15 0.836 0.57576 1.00000
RegionR8 -1.198 0.836 0.99979 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.51 0.836 0.99977 1.00000
RegenerationR2 -2.392 0.836 0.46497 0.85499
RegenerationR3 1.355 0.836 0.63614 0.92333
RegenerationR4 -2.83 0.836 0.38954 0.80718
RegenerationR5 -2.278 0.836 0.50231 0.85979
RegenerationR6 -2.341 0.836 0.35311 0.69831
RegenerationBL 1.613 0.836 0.78468 1.00000
RegenerationTP -0.275 0.836 0.95285 1.00000


Genes with expression patterns similar to MligTC455_13742

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13742 20 0.41 Mlig455_046522

Neo: -

Age: -

2 - - 1.000 - 1.000 - Mlig455_046522 {REF} {Length: 1336} {RNA1310_97283}
2. MligTC455_40363 13 0.28 Mlig455_000782

Neo: -

Age: -

0.993 - - - - 0.993 - Mlig455_000782 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=30.6]} {Mouse: ENSMUSG00000089753, Cd300ld2, CD300 molecule like family member D2, [Score=42.7, Expect=9e-06]} {RNA1310_103775}
3. MligTC455_21392 77 1.6 Mlig455_011728

Neo: -

Age: -

0.987 - - - - 0.987 - Mlig455_011728 {REF} {Length: 1116} {TRANSSPLICED} {RNA1509_23090} {RNA1310_43435} {RNA815_43347}
4. MligTC455_52671 11 0.23 Mlig455_014501, Mlig455_014521, Mlig455_054427

Neo: -

Age: -

0.985 - - - - 0.985 -

Mlig455_014501 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Mlig455_014521 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Mlig455_054427 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}
5. MligTC455_12167 19 0.39 Mlig455_015050

Neo: -

Age: -

0.978 - - - - 0.978 - Mlig455_015050 {REF} {Length: 448} {TRANSSPLICED}
6. MligTC455_22918 48 0.99 Mlig455_024197

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_024197 {REF} {Length: 882} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24504} {RNA1310_56956} {RNA815_52770}
7. MligTC455_10815 32 0.67 Mlig455_063658

Neo: -

Age: -

0.973 - - - - 0.973 - Mlig455_063658 {REF} {Length: 1108} {NoTransDecoderORF} {RNA1509_56535} {RNA1310_58133.1} {RNA815_57938}
8. MligTC455_51660 72 1.51 Mlig455_017813, Mlig455_058033

Neo: -

Age: -

QRFPR 0.97 - - - - 0.970 -

Mlig455_017813 {REF} {Length: 3692} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=159.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.0]; Olfactory receptor [PF13853.8, score=24.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.6]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=127, Expect=6e-32]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=125, Expect=2e-31]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=127, Expect=9e-32]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=105, Expect=2e-24]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [RH, Score=236, Expect=2e-73]} {RNA1310_63091} {RNA815_54301}

Mlig455_058033 {REF} {Length: 3887} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=159.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.0]; Olfactory receptor [PF13853.8, score=24.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.6]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=127, Expect=6e-32]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=125, Expect=2e-31]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=127, Expect=9e-32]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=105, Expect=2e-24]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [RH, Score=236, Expect=2e-73]} {RNA1310_63091} {RNA815_52759}
9. MligTC455_22777 19 0.39 Mlig455_063296

Neo: -

Age: -

PRKAA2 0.966 - - - - 0.966 - Mlig455_063296 {REF} {Length: 2730} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=256.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.2]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.4]; Kinase-like [PF14531.8, score=27.5]; ABC1 atypical kinase-like domain [PF03109.18, score=24.4]; RIO1 family [PF01163.24, score=21.4]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=557, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=554, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=527, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=504, Expect=4e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=549, Expect=0.0]} {RNA1509_12822} {RNA1310_12328.1} {RNA815_3277.1}
10. MligTC455_00530 6 0.12 Mlig455_070149

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_070149 {REF} {Length: 165} {NoTransDecoderORF}
11. MligTC455_18449 27 0.56 Mlig455_027387

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_027387 {REF} {Length: 1499} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]}
12. MligTC455_12741 31 0.65 Mlig455_068263

Neo: -

Age: -

TMEM26 0.962 - - - - 0.962 - Mlig455_068263 {REF} {Length: 2059} {Pfam: Transmembrane protein 26 [PF09772.11, score=224.2]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=126, Expect=2e-32]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [Score=133, Expect=3e-35]} {Dmel: FBgn0039429, CG14238, [Score=179, Expect=2e-51]} {Celegans: WBGene00022469, Y119C1B.3, [Score=136, Expect=5e-36]} {Smed: dd_Smed_v6_16130_0_1, dd_Smed_v6_16130_0_1, [Score=139, Expect=2e-37]} {RNA1310_26669} {RNA815_22828}
13. MligTC455_49325 97 2.03 Mlig455_003430

Neo: -

Age: -

OXR1 0.962 - - - - 0.962 - Mlig455_003430 {REF} {Length: 2734} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.3} {Pfam: TLD [PF07534.18, score=65.1]; LysM domain [PF01476.22, score=24.1]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [Score=82.0, Expect=1e-17]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [Score=80.5, Expect=3e-17]; ENSMUSG00000074628, Tldc2, TBC/LysM associated domain containing 2, [Score=77.4, Expect=3e-16]} {Dmel: FBgn0013576, mtd, mustard, [Score=84.7, Expect=3e-19]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [Score=77.8, Expect=1e-15]} {Smed: dd_Smed_v6_5399_0_1, dd_Smed_v6_5399_0_1, [Score=78.2, Expect=9e-16]} {RNA1509_26806} {RNA1310_21194, RNA1509_26806} {RNA1509_26806, RNA815_10860}
14. MligTC455_10251 25 0.51 Mlig455_002552

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_002552 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_11657} {RNA1310_5276.1} {RNA815_27122}
15. MligTC455_20386 36 0.75 Mlig455_026206

Neo: -

Age: Down-Up-Up

0.959 - - - - 0.959 - Mlig455_026206 {REF} {Length: 3875} {Smed: dd_Smed_v6_14319_0_1, dd_Smed_v6_14319_0_1, [RH, Score=79.0, Expect=6e-17]} {RNA1509_51615} {RNA1310_6888} {RNA815_13531.1}
16. MligTC455_09479 51 1.07 Mlig455_008810

Neo: -

Age: -

0.957 - - - - 0.957 - Mlig455_008810 {REF} {Length: 1380} {RNA1509_53279} {RNA1310_34746} {RNA815_43491}
17. MligTC455_10395 14 0.29 Mlig455_039470

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_039470 {REF} {Length: 682} {RNA1310_75011.1} {RNA815_47673}
18. MligTC455_16040 159 3.32 Mlig455_029062

Neo: -

Age: -

Region-enriched R7: 3.730/0.00014
Region-enriched R6: 2.603/0.00500

0.955 - - - - 0.955 - Mlig455_029062 {REF} {Length: 1051} {Pfam: Ets-domain [PF00178.24, score=23.5]} {RNA1310_48212} {RNA815_36794}
19. MligTC455_34566 15 0.32 Mlig455_070554

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_070554 {REF} {Length: 595} {Pfam: Integrase zinc binding domain [PF17921.3, score=36.3]; Integrase core domain [PF00665.28, score=20.6]} {RNA1509_3061} {RNA1310_380} {RNA815_86.1}
20. MligTC455_49159 267 5.57 Mlig455_062353, Mlig455_062366

Neo: -

Age: -

Region-enriched R4: 3.582/0.01652

0.955 - - - - 0.955 -

Mlig455_062353 {REF} {Length: 739} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}

Mlig455_062366 {REF} {Length: 807} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}
21. MligTC455_13751 141 2.93 Mlig455_066278

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.685

Region-enriched R7: 3.016/0.04041

0.952 - - - - 0.952 - Mlig455_066278 {REF} {Length: 3312} {Pfam: Innexin [PF00876.20, score=292.3]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=75.9, Expect=1e-14]} {Celegans: WBGene00000488, che-7, Innexin, [Score=193, Expect=7e-55]} {Smed: dd_Smed_v6_15239_0_1, dd_Smed_v6_15239_0_1, [Score=273, Expect=1e-86]} {RNA1509_53271} {RNA1310_13768.1, RNA1509_53271} {RNA1509_53271, RNA815_19062}
22. MligTC455_10259 124 2.58 Mlig455_052843

Neo: Int S/G2/M

Age: -

0.951 - - - - 0.951 - Mlig455_052843 {REF} {Length: 1170} {RNA1310_32241.1} {RNA815_32339}
23. MligTC455_07017 17 0.35 Mlig455_038440

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_038440 {REF} {Length: 131} {NoTransDecoderORF} {RNA1310_99368}
24. MligTC455_31300 41 0.85 Mlig455_030074, Mlig455_031046

Neo: -

Age: -

0.95 - - - - 0.950 -

Mlig455_030074 {REF} {Length: 927} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=43.1, Expect=1e-05]} {RNA1509_59044} {RNA1310_32321} {RNA815_63485}

Mlig455_031046 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.0]} {RNA1509_49623} {RNA1310_32321} {RNA815_63485}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA