M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_52671

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52671 11 0.23 Mlig455_014501, Mlig455_014521, Mlig455_054427

Neo: -

Age: -

Mlig455_014501 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Mlig455_014521 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Mlig455_054427 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Cumulative graph for MligTC455_52671

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_52671

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52671 11 0.23 Mlig455_014501, Mlig455_014521, Mlig455_054427

Neo: -

Age: -

 1 - - - - 1.000 -

Mlig455_014501 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Mlig455_014521 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}

Mlig455_054427 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}
2. MligTC455_12167 19 0.39 Mlig455_015050

Neo: -

Age: -

 0.996 - - - - 0.996 - Mlig455_015050 {REF} {Length: 448} {TRANSSPLICED}
3. MligTC455_51660 72 1.51 Mlig455_017813, Mlig455_058033

Neo: -

Age: -

 QRFPR 0.993 - - - - 0.993 -

Mlig455_017813 {REF} {Length: 3692} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=159.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.0]; Olfactory receptor [PF13853.8, score=24.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.6]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=127, Expect=6e-32]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=125, Expect=2e-31]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=127, Expect=9e-32]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=105, Expect=2e-24]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [RH, Score=236, Expect=2e-73]} {RNA1310_63091} {RNA815_54301}

Mlig455_058033 {REF} {Length: 3887} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=159.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.0]; Olfactory receptor [PF13853.8, score=24.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.6]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=127, Expect=6e-32]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=125, Expect=2e-31]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=127, Expect=9e-32]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=105, Expect=2e-24]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [RH, Score=236, Expect=2e-73]} {RNA1310_63091} {RNA815_52759}
4. MligTC455_21392 77 1.6 Mlig455_011728

Neo: -

Age: -

 0.992 - - - - 0.992 - Mlig455_011728 {REF} {Length: 1116} {TRANSSPLICED} {RNA1509_23090} {RNA1310_43435} {RNA815_43347}
5. MligTC455_40363 13 0.28 Mlig455_000782

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_000782 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=30.6]} {Mouse: ENSMUSG00000089753, Cd300ld2, CD300 molecule like family member D2, [Score=42.7, Expect=9e-06]} {RNA1310_103775}
6. MligTC455_13742 20 0.41 Mlig455_046522

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_046522 {REF} {Length: 1336} {RNA1310_97283}
7. MligTC455_22918 48 0.99 Mlig455_024197

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_024197 {REF} {Length: 882} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24504} {RNA1310_56956} {RNA815_52770}
8. MligTC455_00530 6 0.12 Mlig455_070149

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_070149 {REF} {Length: 165} {NoTransDecoderORF}
9. MligTC455_49159 267 5.57 Mlig455_062353, Mlig455_062366

Neo: -

Age: -

Region-enriched R4: 3.582/0.01652

 0.98 - - - - 0.980 -

Mlig455_062353 {REF} {Length: 739} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}

Mlig455_062366 {REF} {Length: 807} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}
10. MligTC455_09479 51 1.07 Mlig455_008810

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_008810 {REF} {Length: 1380} {RNA1509_53279} {RNA1310_34746} {RNA815_43491}
11. MligTC455_12741 31 0.65 Mlig455_068263

Neo: -

Age: -

 TMEM26 0.977 - - - - 0.977 - Mlig455_068263 {REF} {Length: 2059} {Pfam: Transmembrane protein 26 [PF09772.11, score=224.2]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=126, Expect=2e-32]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [Score=133, Expect=3e-35]} {Dmel: FBgn0039429, CG14238, [Score=179, Expect=2e-51]} {Celegans: WBGene00022469, Y119C1B.3, [Score=136, Expect=5e-36]} {Smed: dd_Smed_v6_16130_0_1, dd_Smed_v6_16130_0_1, [Score=139, Expect=2e-37]} {RNA1310_26669} {RNA815_22828}
12. MligTC455_20386 36 0.75 Mlig455_026206

Neo: -

Age: Down-Up-Up

 0.974 - - - - 0.974 - Mlig455_026206 {REF} {Length: 3875} {Smed: dd_Smed_v6_14319_0_1, dd_Smed_v6_14319_0_1, [RH, Score=79.0, Expect=6e-17]} {RNA1509_51615} {RNA1310_6888} {RNA815_13531.1}
13. MligTC455_16040 159 3.32 Mlig455_029062

Neo: -

Age: -

Region-enriched R7: 3.730/0.00014
Region-enriched R6: 2.603/0.00500

 0.971 - - - - 0.971 - Mlig455_029062 {REF} {Length: 1051} {Pfam: Ets-domain [PF00178.24, score=23.5]} {RNA1310_48212} {RNA815_36794}
14. MligTC455_22777 19 0.39 Mlig455_063296

Neo: -

Age: -

 PRKAA2 0.971 - - - - 0.971 - Mlig455_063296 {REF} {Length: 2730} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=256.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.2]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.4]; Kinase-like [PF14531.8, score=27.5]; ABC1 atypical kinase-like domain [PF03109.18, score=24.4]; RIO1 family [PF01163.24, score=21.4]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=557, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=554, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=527, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=504, Expect=4e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=549, Expect=0.0]} {RNA1509_12822} {RNA1310_12328.1} {RNA815_3277.1}
15. MligTC455_10395 14 0.29 Mlig455_039470

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_039470 {REF} {Length: 682} {RNA1310_75011.1} {RNA815_47673}
16. MligTC455_51350 51 1.05 Mlig455_040822, Mlig455_049178

Neo: Neoblast

Age: -

Regeneration-upregulated BL: 5.023

Regeneration-enriched BL: 5.023

 HIST4H4 0.968 - - - - 0.968 -

Mlig455_040822 {REF} {Length: 1558} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_3331} {RNA1310_47788.1} {RNA815_23950.2}

Mlig455_049178 {REF} {Length: 775} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_21430} {RNA1310_47788.1} {RNA815_23950.2}
17. MligTC455_06171 11 0.22 Mlig455_042271

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_042271 {REF} {Length: 213} {NoTransDecoderORF}
18. MligTC455_10259 124 2.58 Mlig455_052843

Neo: Int S/G2/M

Age: -

 0.966 - - - - 0.966 - Mlig455_052843 {REF} {Length: 1170} {RNA1310_32241.1} {RNA815_32339}
19. MligTC455_15703 61 1.28 Mlig455_028081, Mlig455_028266

Neo: Int S/G2/M

Age: -

 0.966 - - - - 0.966 -

Mlig455_028081 {REF} {Length: 452} {NoTransDecoderORF} {RNA1509_39445} {RNA1310_4564} {RNA815_3067}

Mlig455_028266 {REF} {Length: 264} {NoTransDecoderORF} {RNA1509_21675} {RNA1310_4564} {RNA815_3067}
20. MligTC455_39829 112 2.34 Mlig455_015928

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.786

 SVOP 0.963 - - - - 0.963 - Mlig455_015928 {REF} {Length: 4798} {Pfam: Sugar (and other) transporter [PF00083.26, score=137.1]; Major Facilitator Superfamily [PF07690.18, score=130.4]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=134, Expect=3e-32]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=120, Expect=8e-28]} {Dmel: FBgn0034956, CG4324, [Score=127, Expect=1e-30]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=138, Expect=3e-34]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=178, Expect=4e-48]} {RNA1509_47157} {RNA1310_47802} {RNA815_44733}
21. MligTC455_01195 22 0.47 Mlig455_036133

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_036133 {REF} {Length: 295} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_22534} {RNA815_1171.1}
22. MligTC455_01488 11 0.23 Mlig455_008876, Mlig455_008977

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_008876 {REF} {Length: 319} {NoTransDecoderORF}

Mlig455_008977 {REF} {Length: 318} {NoTransDecoderORF}
23. MligTC455_06187 7 0.16 Mlig455_063882

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_063882 {REF} {Length: 216} {NoTransDecoderORF} {RNA1310_16179.2} {RNA815_14698}
24. MligTC455_14028 9 0.2 Mlig455_064828

Neo: -

Age: -

 MC5R 0.962 - - - - 0.962 - Mlig455_064828 {REF} {Length: 1550} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=78.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=36.0]; Olfactory receptor [PF13853.8, score=29.1]} {Human: ENSG00000176136, MC5R, melanocortin 5 receptor, [Score=71.2, Expect=4e-13]; ENSG00000128271, ADORA2A, adenosine A2a receptor, [Score=70.1, Expect=2e-12]} {Mouse: ENSMUSG00000007480, Mc5r, melanocortin 5 receptor, [Score=62.8, Expect=2e-10]; ENSMUSG00000020178, Adora2a, adenosine A2a receptor, [Score=60.5, Expect=2e-09]} {Dmel: FBgn0011582, Dop1R1, Dopamine 1-like receptor 1, [Score=50.8, Expect=1e-06]} {RNA1310_48824}
25. MligTC455_16910 10 0.21 Mlig455_049235

Neo: -

Age: Down-Up-Down

 0.962 - - - - 0.962 - Mlig455_049235 {REF} {Length: 2857} {NoTransDecoderORF} {RNA1509_11508} {RNA1310_21316} {RNA815_11751}
26. MligTC455_17719 11 0.22 Mlig455_047217

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_047217 {REF} {Length: 724} {NoTransDecoderORF} {RNA1310_24567.1}
27. MligTC455_07017 17 0.35 Mlig455_038440

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_038440 {REF} {Length: 131} {NoTransDecoderORF} {RNA1310_99368}
28. MligTC455_07073 6 0.12 Mlig455_010321

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_010321 {REF} {Length: 1488} {Smed: dd_Smed_v6_33317_0_1, dd_Smed_v6_33317_0_1, [Score=73.2, Expect=1e-16]} {RNA1509_59035} {RNA1310_5145.1} {RNA815_9565}
29. MligTC455_07854 6 0.13 Mlig455_025830

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_025830 {REF} {Length: 530} {NoTransDecoderORF} {RNA1509_31725} {RNA1310_73607.2} {RNA815_19357}
30. MligTC455_10991 207 4.31 Mlig455_011837, Mlig455_013118

Neo: Irradiation

Age: Down-Up-Down

 EGR4 0.961 - - - - 0.961 -

Mlig455_011837 {REF} {Length: 1687} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.2]; Zinc-finger double domain [PF13465.8, score=47.8]; C2H2-type zinc finger [PF13894.8, score=41.0]; C2H2-type zinc-finger domain [PF13909.8, score=23.2]} {Human: ENSG00000135625, EGR4, early growth response 4, [Score=107, Expect=3e-24]; ENSG00000179388, EGR3, early growth response 3, [Score=103, Expect=6e-24]; ENSG00000120738, EGR1, early growth response 1, [Score=102, Expect=6e-23]} {Mouse: ENSMUSG00000071341, Egr4, early growth response 4, [Score=107, Expect=9e-25]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=103, Expect=6e-24]; ENSMUSG00000038418, Egr1, early growth response 1, [Score=102, Expect=4e-23]} {Dmel: FBgn0013469, klu, klumpfuss, [RH, Score=130, Expect=2e-32]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [RH, Score=133, Expect=8e-34]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=137, Expect=1e-36]} {RNA1509_38897} {RNA1310_16481} {RNA815_46371}

Mlig455_013118 {REF} {Length: 1946} {RNA1509_38897} {RNA1310_16481, RNA1509_38897} {RNA1509_38897, RNA815_46371}
31. MligTC455_05000 16 0.33 Mlig455_028316

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_028316 {REF} {Length: 823} {NoTransDecoderORF}
32. MligTC455_10815 32 0.67 Mlig455_063658

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_063658 {REF} {Length: 1108} {NoTransDecoderORF} {RNA1509_56535} {RNA1310_58133.1} {RNA815_57938}
33. MligTC455_18168 39 0.81 Mlig455_062580

Neo: -

Age: logFC(26M/2M)=-0.368

Regeneration-upregulated BL: 7.138

Regeneration-enriched BL: 7.138

 CCDC157 0.96 - - - - 0.960 - Mlig455_062580 {REF} {Length: 3389} {TRANSSPLICED} {Human: ENSG00000187860, CCDC157, coiled-coil domain containing 157, [RH, Score=185, Expect=1e-48]} {Mouse: ENSMUSG00000051427, Ccdc157, coiled-coil domain containing 157, [RH, Score=191, Expect=6e-51]} {Smed: dd_Smed_v6_10757_0_1, dd_Smed_v6_10757_0_1, [RH, Score=226, Expect=3e-63]} {RNA1509_20327} {RNA1310_8258, RNA1509_20327} {RNA1509_20327, RNA815_4255}
34. MligTC455_11773 18 0.38 Mlig455_064680

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_064680 {REF} {Length: 221} {NoTransDecoderORF}
35. MligTC455_17796 102 2.13 Mlig455_021185

Neo: -

Age: Up-Down-Down

 GCHFR 0.959 - - - - 0.959 - Mlig455_021185 {REF} {Length: 731} {TRANSSPLICED} {Pfam: GTP cyclohydrolase I feedback regulatory protein (GFRP) [PF06399.15, score=116.1]} {Human: ENSG00000137880, GCHFR, GTP cyclohydrolase I feedback regulator, [RH, Score=108, Expect=5e-32]} {Mouse: ENSMUSG00000046814, Gchfr, GTP cyclohydrolase I feedback regulator, [RH, Score=106, Expect=2e-31]} {Celegans: WBGene00044736, gfrp-1, GTP cyclohydrolase I Feedback Regulatory Protein homolog, [RH, Score=90.9, Expect=2e-25]} {Smed: dd_Smed_v6_6329_0_1, dd_Smed_v6_6329_0_1, [RH, Score=92.8, Expect=2e-26]} {RNA1509_53769} {RNA1310_38628} {RNA815_28461}
36. MligTC455_20991 187 3.89 Mlig455_022250

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=6.428

Region-enriched R3: 6.761/0.00001

 MEP1B 0.955 - - - - 0.955 - Mlig455_022250 {REF} {Length: 892} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=158.6]} {Human: ENSG00000141434, MEP1B, meprin A subunit beta, [RH, Score=130, Expect=1e-33]} {Mouse: ENSMUSG00000024313, Mep1b, meprin 1 beta, [RH, Score=132, Expect=1e-34]} {Dmel: FBgn0039069, CG6763, [RH, Score=147, Expect=3e-42]} {Celegans: WBGene00003525, nas-6, Zinc metalloproteinase nas-6, [RH, Score=143, Expect=8e-41]} {Smed: dd_Smed_v6_85_0_1, dd_Smed_v6_85_0_1, [RH, Score=131, Expect=3e-37]} {RNA1509_2621} {RNA1310_42790.1} {RNA815_21158.1}
37. MligTC455_27887 63 1.32 Mlig455_005896

Neo: -

Age: Down-Down-Up

 0.955 - - - - 0.955 - Mlig455_005896 {REF} {Length: 2030} {TRANSSPLICED} {Pfam: AP-5 complex subunit sigma-1 [PF15001.8, score=43.7]} {RNA1509_48400} {RNA1310_26125} {RNA815_7192}
38. MligTC455_39787 8 0.17 Mlig455_066856

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_066856 {REF} {Length: 238} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_9198} {RNA815_36985}
39. MligTC455_37650 11 0.23 Mlig455_058650

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_058650 {REF} {Length: 1727} {NoTransDecoderORF} {RNA1509_14662} {RNA1310_37734} {RNA815_42070}
40. MligTC455_40239 433 9.02 Mlig455_034356, Mlig455_034420, Mlig455_034464

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 2.722

Region-enriched R4: 2.901/0.00089

 PNPO 0.954 - - - - 0.954 -

Mlig455_034356 {REF} {Length: 1978} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=53.2]; Pyridoxamine 5'-phosphate oxidase like [PF16242.7, score=32.9]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [Score=72.4, Expect=1e-14]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [Score=67.0, Expect=8e-13]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=57.8, Expect=6e-10]} {RNA1509_36121} {RNA1310_23054.1} {RNA815_20727}

Mlig455_034420 {REF} {Length: 2138} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=53.2]; Pyridoxamine 5'-phosphate oxidase like [PF16242.7, score=32.9]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [Score=72.0, Expect=2e-14]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [Score=66.2, Expect=1e-12]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=57.4, Expect=6e-10]} {RNA1509_36121} {RNA1310_23054.1} {RNA815_20727}

Mlig455_034464 {REF} {Length: 2369} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=53.2]; Pyridoxamine 5'-phosphate oxidase like [PF16242.7, score=32.9]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [Score=72.0, Expect=2e-14]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [Score=66.2, Expect=1e-12]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=57.4, Expect=6e-10]} {RNA1509_36121} {RNA1310_23054.1} {RNA815_20727}
41. MligTC455_12539 39 0.81 Mlig455_050346, Mlig455_050360

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_050346 {REF} {Length: 1438} {Smed: dd_Smed_v6_38985_0_1, dd_Smed_v6_38985_0_1, [Score=57.0, Expect=1e-09]}

Mlig455_050360 {REF} {Length: 1447} {Smed: dd_Smed_v6_38985_0_1, dd_Smed_v6_38985_0_1, [Score=57.0, Expect=1e-09]}
42. MligTC455_05684 8 0.16 Mlig455_050049

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_050049 {REF} {Length: 894} {NoTransDecoderORF} {RNA1509_18097} {RNA1310_131002} {RNA815_14810.1}
43. MligTC455_13751 141 2.93 Mlig455_066278

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.685

Region-enriched R7: 3.016/0.04041

 0.952 - - - - 0.952 - Mlig455_066278 {REF} {Length: 3312} {Pfam: Innexin [PF00876.20, score=292.3]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=75.9, Expect=1e-14]} {Celegans: WBGene00000488, che-7, Innexin, [Score=193, Expect=7e-55]} {Smed: dd_Smed_v6_15239_0_1, dd_Smed_v6_15239_0_1, [Score=273, Expect=1e-86]} {RNA1509_53271} {RNA1310_13768.1, RNA1509_53271} {RNA1509_53271, RNA815_19062}
44. MligTC455_20394 24 0.5 Mlig455_027466

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_027466 {REF} {Length: 884} {RNA1310_23417} {RNA815_54837}
45. MligTC455_20632 12 0.24 Mlig455_008126

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_008126 {REF} {Length: 996} {NoTransDecoderORF} {RNA1509_39410} {RNA1310_104480} {RNA815_5258}
46. MligTC455_18493 152 3.17 Mlig455_045534

Neo: -

Age: Down-Up-Down

 0.951 - - - - 0.951 - Mlig455_045534 {REF} {Length: 2309} {TRANSSPLICED} {RNA1509_22048} {RNA1310_10576.1} {RNA815_5393}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA