M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_13843

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13843 106 2.21 Mlig455_002736, Mlig455_063352

Neo: -

Age: -

Mlig455_002736 {REF} {Length: 2644} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=53.9, Expect=7e-09]}

Mlig455_063352 {REF} {Length: 1108} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=68.6, Expect=1e-13]}

Cumulative graph for MligTC455_13843

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.366 2.049 0.99980 1.00000
RegionR2 3.195 2.049 0.01338 0.12085
RegionR3 -1.653 2.049 0.99979 1.00000
RegionR4 3.123 2.049 0.01550 0.08464
RegionR5 0.259 2.049 0.47897 0.84223
RegionR6 -2.035 2.049 0.99980 1.00000
RegionR7 -1.63 2.049 0.99984 1.00000
RegionR8 -0.893 2.049 0.99985 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.656 2.049 0.99998 1.00000
RegenerationR2 0.637 2.049 0.43363 0.83637
RegenerationR3 4.341 2.049 0.00638 0.14450
RegenerationR4 0.19 2.049 0.88151 1.00000
RegenerationR5 2.431 2.049 0.03359 0.30519
RegenerationR6 5.889 2.049 0.00028 0.01639
RegenerationBL -1.121 2.049 0.99994 1.00000
RegenerationTP 6.128 2.049 0.00276 0.08621


Genes with expression patterns similar to MligTC455_13843

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13843 106 2.21 Mlig455_002736, Mlig455_063352

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000

Mlig455_002736 {REF} {Length: 2644} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=53.9, Expect=7e-09]}

Mlig455_063352 {REF} {Length: 1108} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=68.6, Expect=1e-13]}
2. MligTC455_32023 58 1.21 Mlig455_042769

Neo: -

Age: Up-Down-Up

 1.898 - - 0.942 - - 0.956 Mlig455_042769 {REF} {Length: 5869} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1}
3. MligTC455_13060 99 2.06 Mlig455_022766

Neo: -

Age: -

 1.851 - - 0.992 - - 0.859 Mlig455_022766 {REF} {Length: 787} {NoTransDecoderORF} {RNA1310_132565}
4. MligTC455_00974 117 2.43 Mlig455_065860

Neo: -

Age: -

 1.778 - - 0.952 0.826 - - Mlig455_065860 {REF} {Length: 728} {NoTransDecoderORF}
5. MligTC455_27807 141 2.93 Mlig455_019560

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.009

 1.754 - - 0.966 0.788 - - Mlig455_019560 {REF} {Length: 3424} {Pfam: Poxvirus A32 protein [PF04665.14, score=30.3]} {Celegans: WBGene00021498, Y40C7B.1, [RH, Score=66.2, Expect=3e-12]} {RNA1509_5514} {RNA1310_683.1} {RNA815_1542.1}
6. MligTC455_21762 134 2.8 Mlig455_031432

Neo: -

Age: -

 1.684 - - 0.971 0.713 - - Mlig455_031432 {REF} {Length: 284} {NoTransDecoderORF} {RNA1509_42914} {RNA1310_99471} {RNA815_64986}
7. MligTC455_22973 69 1.43 Mlig455_035875, Mlig455_035912, Mlig455_035913

Neo: -

Age: -

 1.683 - - 0.980 - 0.703 -

Mlig455_035875 {REF} {Length: 3712} {NoTransDecoderORF} {RNA1310_130183} {RNA815_30776}

Mlig455_035912 {REF} {Length: 1408} {NoTransDecoderORF} {RNA1310_102146} {RNA815_30776}

Mlig455_035913 {REF} {Length: 776} {NoTransDecoderORF} {RNA1310_29036.3}
8. MligTC455_26285 1067 22.23 Mlig455_041966

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.613

Regeneration-enriched TP: 3.474
Regeneration-enriched BL: 3.163

 KLF18 1.683 - - 0.952 - 0.731 - Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}
9. MligTC455_29454 50 1.05 Mlig455_065107

Neo: -

Age: -

 CHRNA10 1.672 - - 0.963 - 0.709 - Mlig455_065107 {REF} {Length: 3864} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=79.6]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=64.7, Expect=5e-11]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=61.6, Expect=5e-10]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00000051, acr-12, AcetylCholine Receptor; Nicotinic acetylcholine receptor-like subunit ACR-12, [Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=74.7, Expect=6e-15]} {RNA1509_57562} {RNA1310_27363} {RNA815_5685.1}
10. MligTC455_24137 21 0.43 Mlig455_032992

Neo: -

Age: -

Region-enriched R4: 5.384/0.03048

 0.993 - - 0.993 - - - Mlig455_032992 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.1]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.8, Expect=3e-17]} {RNA1509_53407, RNA1509_59006} {RNA1310_19264, RNA1509_59006} {RNA1509_59006, RNA815_10011.2}
11. MligTC455_04675 3 0.07 Mlig455_041371

Neo: -

Age: Up-Down-Down

 0.992 - - 0.992 - - - Mlig455_041371 {REF} {Length: 2057} {RNA1509_29127} {RNA1310_6200} {RNA815_31134}
12. MligTC455_27648 19 0.39 Mlig455_044670

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.920

 SZT2 0.992 - - 0.992 - - - Mlig455_044670 {REF} {Length: 12113} {Human: ENSG00000198198, SZT2, SZT2, KICSTOR complex subunit, [Score=82.4, Expect=2e-14]} {Mouse: ENSMUSG00000033253, Szt2, seizure threshold 2, [Score=74.3, Expect=4e-12]} {Smed: dd_Smed_v6_8946_0_1, dd_Smed_v6_8946_0_1, [Score=108, Expect=9e-23]} {RNA1509_25909} {RNA1310_92.1} {RNA815_13061}
13. MligTC455_06678 10 0.22 Mlig455_051040

Neo: -

Age: -

 SLC7A1 0.991 - - 0.991 - - - Mlig455_051040 {REF} {Length: 1969} {Pfam: Amino acid permease [PF13520.8, score=122.2]; Amino acid permease [PF00324.23, score=107.8]; C-terminus of AA_permease [PF13906.8, score=56.1]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=297, Expect=3e-92]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=300, Expect=2e-93]; ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=297, Expect=3e-92]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [Score=290, Expect=5e-89]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [Score=290, Expect=5e-89]} {Dmel: FBgn0036984, CG13248, [Score=290, Expect=1e-89]} {Celegans: WBGene00016806, C50D2.2, [Score=293, Expect=1e-91]} {Smed: dd_Smed_v6_8652_0_4, dd_Smed_v6_8652_0_4, [Score=436, Expect=3e-147]} {RNA1310_82370} {RNA815_51664}
14. MligTC455_11168 10 0.21 Mlig455_015184

Neo: -

Age: -

 0.988 - - 0.988 - - - Mlig455_015184 {REF} {Length: 1552} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_60529.2} {RNA815_62333}
15. MligTC455_50304 17 0.35 Mlig455_067422

Neo: -

Age: -

 0.987 - - 0.987 - - - Mlig455_067422 {REF} {Length: 751} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_82384} {RNA815_44872}
16. MligTC455_37330 64 1.32 Mlig455_050800, Mlig455_070183

Neo: -

Age: -

 0.985 - - 0.985 - - -

Mlig455_050800 {REF} {Length: 405} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_41194.1}

Mlig455_070183 {REF} {Length: 576} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
17. MligTC455_46952 43 0.9 Mlig455_031219

Neo: -

Age: -

Region-enriched R4: 5.444/0.03746

 0.985 - - 0.985 - - - Mlig455_031219 {REF} {Length: 735}
18. MligTC455_48513 33 0.69 Mlig455_030896

Neo: -

Age: logFC(26M/2M)=1.097

 P2RX4 0.985 - - 0.985 - - - Mlig455_030896 {REF} {Length: 4263} {Pfam: ATP P2X receptor [PF00864.21, score=302.7]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=225, Expect=2e-67]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=208, Expect=4e-61]; ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=198, Expect=2e-56]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=278, Expect=9e-87]} {RNA1509_4774} {RNA1310_12543.1} {RNA815_4703.1}
19. MligTC455_13658 26 0.53 Mlig455_063501

Neo: -

Age: -

 0.983 - - 0.983 - - - Mlig455_063501 {REF} {Length: 1954} {RNA1310_18636.2} {RNA815_32755}
20. MligTC455_10602 7 0.14 Mlig455_069165

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_069165 {REF} {Length: 609}
21. MligTC455_36703 21 0.43 Mlig455_032688

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_032688 {REF} {Length: 7822} {RNA1509_59817} {RNA1310_14959.1} {RNA815_22311}
22. MligTC455_26072 48 1 Mlig455_002470, Mlig455_045913

Neo: -

Age: -

 0.98 - - 0.980 - - -

Mlig455_002470 {REF} {Length: 7792} {Pfam: Caspase domain [PF00656.24, score=40.7]} {Mouse: ENSMUSG00000026029, Casp8, caspase 8, [Score=52.0, Expect=2e-07]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=3e-09]} {Smed: dd_Smed_v6_8326_0_1, dd_Smed_v6_8326_0_1, [Score=47.8, Expect=1e-06]} {RNA1509_50272} {RNA1310_29664} {RNA815_7717.1}

Mlig455_045913 {REF} {Length: 5924} {Pfam: Caspase domain [PF00656.24, score=50.8]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=47.4, Expect=1e-05]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=58.2, Expect=3e-09]} {Smed: dd_Smed_v6_8326_0_1, dd_Smed_v6_8326_0_1, [Score=64.7, Expect=8e-12]} {RNA1509_50272} {RNA1310_29664} {RNA815_7717.1}
23. MligTC455_03555 28 0.59 Mlig455_009266

Neo: -

Age: Up-Up-Down

 0.979 - - 0.979 - - - Mlig455_009266 {REF} {Length: 1235} {NoTransDecoderORF} {RNA1509_42100} {RNA1310_56786} {RNA815_61979}
24. MligTC455_07736 28 0.58 Mlig455_008920

Neo: -

Age: -

 0.978 - - 0.978 - - - Mlig455_008920 {REF} {Length: 531} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_6578} {RNA815_48322}
25. MligTC455_33449 53 1.11 Mlig455_048658, Mlig455_063410

Neo: -

Age: -

 0.978 - - 0.978 - - -

Mlig455_048658 {REF} {Length: 1769} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=86.3, Expect=5e-17]} {RNA1509_51537} {RNA1310_24973} {RNA815_7432}

Mlig455_063410 {REF} {Length: 2520} {Pfam: Sporozoite P67 surface antigen [PF05642.13, score=19.6]} {RNA1509_51537} {RNA1310_24973} {RNA815_7432}
26. MligTC455_37130 135 2.81 Mlig455_059474, Mlig455_070000

Neo: -

Age: Down-Up-Up

 CUBN 0.978 - - - - - 0.978

Mlig455_059474 {REF} {Length: 4668} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=25.8]} {RNA1509_40399, RNA1509_51908} {RNA1310_340.1, RNA1509_51908} {RNA1509_51908, RNA815_1857}

Mlig455_070000 {REF} {Length: 2337} {Pfam: CUB domain [PF00431.22, score=107.7]; CUB-like domain [PF02408.22, score=27.1]} {Human: ENSG00000107611, CUBN, cubilin, [Score=67.0, Expect=8e-11]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.8, Expect=1e-07]} {Dmel: FBgn0031879, uif, uninflatable, [Score=60.1, Expect=5e-09]} {Celegans: WBGene00011222, R10H10.3, [Score=51.6, Expect=7e-07]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=56.2, Expect=4e-08]} {RNA1509_23859} {RNA1310_38123} {RNA815_26339.1}
27. MligTC455_01014 50 1.04 Mlig455_061332

Neo: -

Age: -

 0.977 - - 0.977 - - - Mlig455_061332 {REF} {Length: 923} {RNA1310_87489}
28. MligTC455_07328 26 0.55 Mlig455_058300

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_058300 {REF} {Length: 429} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_89251}
29. MligTC455_43675 75 1.56 Mlig455_046679

Neo: -

Age: -

 0.976 - - 0.976 - - - Mlig455_046679 {REF} {Length: 2337} {RNA1509_19077} {RNA1310_37453.1} {RNA815_8862.2}
30. MligTC455_10729 44 0.93 Mlig455_011434

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_011434 {REF} {Length: 429} {NoTransDecoderORF} {RNA1509_36541} {RNA1310_37624} {RNA815_20457.1}
31. MligTC455_11804 40 0.84 Mlig455_049994, Mlig455_050022

Neo: -

Age: Up-Down-Up

 0.975 - - 0.975 - - -

Mlig455_049994 {REF} {Length: 2541} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}

Mlig455_050022 {REF} {Length: 1815} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}
32. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
33. MligTC455_17210 20 0.42 Mlig455_055047

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_055047 {REF} {Length: 1907} {RNA1310_63298} {RNA815_53381}
34. MligTC455_37865 2608 54.33 Mlig455_011086

Neo: Int S/G2/M

Age: logFC(26M/2M)=2.454

Region-enriched R4: 2.125/0.01250

 RPL28 0.968 - - 0.968 - - - Mlig455_011086 {REF} {Length: 624} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=95.9]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=119, Expect=5e-35]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=119, Expect=3e-35]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=96.7, Expect=2e-26]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [RH, Score=50.1, Expect=1e-08]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [Score=54.3, Expect=2e-10]} {RNA1509_359} {RNA1310_55482} {RNA815_27285}
35. MligTC455_21555 70 1.46 Mlig455_014351

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_014351 {REF} {Length: 4507} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=69.9]} {RNA1509_41009} {RNA1310_68932} {RNA815_36459}
36. MligTC455_38016 51 1.07 Mlig455_054344

Neo: -

Age: Down-Up-Down

 CFAP53 0.967 - - 0.967 - - - Mlig455_054344 {REF} {Length: 2687} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=77.5]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=172, Expect=9e-47]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=166, Expect=7e-45]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=1e-96]} {RNA1509_1100} {RNA1310_13648, RNA1509_1100} {RNA1509_1100, RNA815_5728}
37. MligTC455_39002 35 0.72 Mlig455_041561

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_041561 {REF} {Length: 743} {NoTransDecoderORF} {RNA1509_13203} {RNA1310_24973} {RNA815_7432}
38. MligTC455_47410 144 3 Mlig455_066471

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_066471 {REF} {Length: 690} {NoTransDecoderORF} {RNA1509_9488} {RNA1310_3197} {RNA815_3130}
39. MligTC455_51312 38 0.8 Mlig455_015513

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_015513 {REF} {Length: 670} {RNA1509_39535} {RNA1310_86982} {RNA815_28901}
40. MligTC455_14889 208 4.32 Mlig455_006489, Mlig455_042232, Mlig455_056390, Mlig455_058598, Mlig455_070107, Mlig455_070775

Neo: -

Age: -

 0.966 - - 0.966 - - -

Mlig455_006489 {REF} {Length: 2624} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_042232 {REF} {Length: 2149} {TRANSSPLICED} {RNA1509_40891} {RNA1310_12069} {RNA815_24445}

Mlig455_056390 {REF} {Length: 4036} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_058598 {REF} {Length: 4352} {Pfam: Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=23.1]} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_070107 {REF} {Length: 2001} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_070775 {REF} {Length: 4555} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}
41. MligTC455_29262 96 2 Mlig455_038249

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.738

 0.965 - - 0.965 - - - Mlig455_038249 {REF} {Length: 8932} {RNA1509_25125, RNA1509_25587, RNA1509_9188} {RNA1310_234.1, RNA1509_25125, RNA1509_25587} {RNA1509_25125, RNA1509_25587, RNA815_23.1}
42. MligTC455_37458 120 2.49 Mlig455_037280, Mlig455_042333, Mlig455_055120

Neo: -

Age: -

 CUBN 0.962 - - 0.962 - - -

Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
43. MligTC455_33725 46 0.96 Mlig455_059862

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
44. MligTC455_12958 55 1.15 Mlig455_055683

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_055683 {REF} {Length: 1376}
45. MligTC455_34354 1250 26.04 Mlig455_041299, Mlig455_056201

Neo: -

Age: -

Regeneration-downregulated BL: -2.125

Regeneration-depleted BL: -2.125

 DYNLRB2 0.96 - - - - - 0.960

Mlig455_041299 {REF} {Length: 5797} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728, RNA1509_41581} {RNA1310_30473, RNA1509_41581} {RNA1509_41581, RNA815_14022}

Mlig455_056201 {REF} {Length: 1126} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=82.2]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=9e-43]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=136, Expect=3e-43]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=135, Expect=5e-43]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=101, Expect=1e-29]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=144, Expect=2e-46]} {RNA1509_28728} {RNA1310_30473, RNA1509_28728} {RNA1509_28728, RNA815_14022}
46. MligTC455_30165 81 1.69 Mlig455_020913

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.356

 0.958 - - - - - 0.958 Mlig455_020913 {REF} {Length: 4138} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=34.5]; Ankyrin repeat [PF00023.32, score=25.4]; Ankyrin repeat [PF13606.8, score=24.2]; Ankyrin repeats (many copies) [PF13857.8, score=20.4]} {RNA1509_14810} {RNA1310_3488.2} {RNA815_24511}
47. MligTC455_37195 68 1.41 Mlig455_033638, Mlig455_033665

Neo: -

Age: Up-Down-Down

 ASIC1 0.958 - - 0.958 - - -

Mlig455_033638 {REF} {Length: 3007} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=199.6]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=60.8, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=55.8, Expect=1e-07]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [RH, Score=483, Expect=5e-165]} {RNA1509_46829} {RNA1310_13649} {RNA815_15065}

Mlig455_033665 {REF} {Length: 4082} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=199.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=56.6, Expect=6e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=68.6, Expect=9e-12]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [RH, Score=483, Expect=8e-165]} {RNA1509_46829} {RNA1310_13649, RNA1509_46829} {RNA1509_46829, RNA815_15065}
48. MligTC455_24732 252 5.24 Mlig455_029303, Mlig455_029304, Mlig455_029325, Mlig455_058866

Neo: -

Age: -

Region-enriched R6: 3.019/0.02615

 JPH1, JPH2, JPH3 0.957 - - - - - 0.957

Mlig455_029303 {REF} {Length: 368} {Pfam: MORN repeat [PF02493.22, score=50.2]} {Human: ENSG00000149596, JPH2, junctophilin 2, [Score=155, Expect=1e-44]; ENSG00000104369, JPH1, junctophilin 1, [Score=148, Expect=3e-42]} {Mouse: ENSMUSG00000017817, Jph2, junctophilin 2, [Score=154, Expect=2e-44]; ENSMUSG00000042686, Jph1, junctophilin 1, [Score=151, Expect=1e-43]} {Dmel: FBgn0032129, jp, junctophilin, [Score=131, Expect=1e-36]} {Celegans: WBGene00002179, jph-1, JunctoPHilin, [Score=150, Expect=3e-43]} {Smed: dd_Smed_v6_4752_0_1, dd_Smed_v6_4752_0_1, [Score=157, Expect=9e-46]} {RNA1509_45061} {RNA1310_46786} {RNA815_45682}

Mlig455_029304 {REF} {Length: 3386} {Pfam: MORN repeat [PF02493.22, score=51.8]} {Human: ENSG00000104369, JPH1, junctophilin 1, [Score=152, Expect=8e-38]; ENSG00000149596, JPH2, junctophilin 2, [Score=145, Expect=2e-35]} {Mouse: ENSMUSG00000042686, Jph1, junctophilin 1, [Score=151, Expect=1e-37]; ENSMUSG00000025318, Jph3, junctophilin 3, [Score=147, Expect=4e-36]} {Dmel: FBgn0032129, jp, junctophilin, [Score=194, Expect=1e-50]} {Celegans: WBGene00002179, jph-1, JunctoPHilin, [Score=153, Expect=3e-38]} {Smed: dd_Smed_v6_4752_0_1, dd_Smed_v6_4752_0_1, [Score=187, Expect=9e-49]} {RNA1310_13793.1} {RNA815_9466}

Mlig455_029325 {REF} {Length: 3954} {Pfam: MORN repeat [PF02493.22, score=100.7]} {Human: ENSG00000154118, JPH3, junctophilin 3, [Score=350, Expect=7e-106]} {Mouse: ENSMUSG00000025318, Jph3, junctophilin 3, [Score=348, Expect=9e-106]} {Dmel: FBgn0032129, jp, junctophilin, [Score=375, Expect=7e-113]} {Celegans: WBGene00002179, jph-1, JunctoPHilin, [Score=346, Expect=4e-105]} {Smed: dd_Smed_v6_4752_0_1, dd_Smed_v6_4752_0_1, [Score=380, Expect=3e-116]} {RNA1310_13793.1} {RNA815_9466}

Mlig455_058866 {REF} {Length: 1579} {Pfam: MORN repeat [PF02493.22, score=78.9]} {Human: ENSG00000154118, JPH3, junctophilin 3, [Score=270, Expect=7e-83]; ENSG00000149596, JPH2, junctophilin 2, [Score=266, Expect=7e-82]; ENSG00000104369, JPH1, junctophilin 1, [Score=263, Expect=7e-81]} {Mouse: ENSMUSG00000025318, Jph3, junctophilin 3, [Score=272, Expect=7e-84]; ENSMUSG00000042686, Jph1, junctophilin 1, [Score=270, Expect=9e-84]; ENSMUSG00000017817, Jph2, junctophilin 2, [Score=265, Expect=1e-81]} {Dmel: FBgn0032129, jp, junctophilin, [Score=275, Expect=7e-83]} {Celegans: WBGene00002179, jph-1, JunctoPHilin, [Score=272, Expect=4e-84]} {Smed: dd_Smed_v6_4752_0_1, dd_Smed_v6_4752_0_1, [Score=276, Expect=2e-84]} {RNA1310_46786} {RNA815_45682}
49. MligTC455_34804 296 6.17 Mlig455_006896

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_006896 {REF} {Length: 7567} {TRANSSPLICED} {Smed: dd_Smed_v6_9784_0_3, dd_Smed_v6_9784_0_3, [RH, Score=75.9, Expect=2e-13]} {RNA1509_29125, RNA1509_4353} {RNA1310_2901, RNA1509_29125} {RNA1509_29125, RNA815_843}
50. MligTC455_39455 42 0.87 Mlig455_036460

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_036460 {REF} {Length: 1044} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
51. MligTC455_07516 112 2.34 Mlig455_060804

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_060804 {REF} {Length: 844} {Pfam: Presenilin [PF01080.19, score=19.5]} {RNA1509_21195} {RNA1310_23162} {RNA815_26275}
52. MligTC455_31879 41 0.85 Mlig455_035930

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_035930 {REF} {Length: 1472} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.3]} {RNA1509_54816} {RNA1310_46323, RNA1509_54816} {RNA1509_54816, RNA815_13104.1}
53. MligTC455_30272 339 7.06 Mlig455_003363, Mlig455_042254, Mlig455_062169

Neo: -

Age: Up-Up-Down

 0.954 - - - - - 0.954

Mlig455_003363 {REF} {Length: 1628} {Celegans: WBGene00016348, C33E10.6, [RH, Score=272, Expect=9e-81]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=253, Expect=6e-77]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_042254 {REF} {Length: 322} {Celegans: WBGene00022511, ZC53.4, [Score=69.3, Expect=5e-15]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_062169 {REF} {Length: 1903} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.1]} {Celegans: WBGene00022511, ZC53.4, [RH, Score=281, Expect=5e-83]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=262, Expect=1e-79]} {RNA1509_19771, RNA1509_5039} {RNA1310_3396.1, RNA1509_19771} {RNA1509_19771, RNA815_1342.1}
54. MligTC455_39915 127 2.65 Mlig455_002965

Neo: -

Age: Up-Down-Up

 HSPB1 0.954 - - - - - 0.954 Mlig455_002965 {REF} {Length: 2866} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=48.1]} {Human: ENSG00000106211, HSPB1, heat shock protein family B (small) member 1, [RH, Score=53.1, Expect=1e-07]; ENSG00000152137, HSPB8, heat shock protein family B (small) member 8, [RH, Score=53.1, Expect=1e-07]} {Mouse: ENSMUSG00000041548, Hspb8, heat shock protein 8, [RH, Score=53.1, Expect=8e-08]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [RH, Score=70.1, Expect=9e-14]} {Smed: dd_Smed_v6_15128_0_2, dd_Smed_v6_15128_0_2, [Score=82.0, Expect=2e-17]} {RNA1509_23358} {RNA1310_19444} {RNA815_29507}
55. MligTC455_40649 24 0.49 Mlig455_066232

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_066232 {REF} {Length: 2453} {RNA1310_42980.1} {RNA815_47590}
56. MligTC455_52571 122 2.54 Mlig455_019376, Mlig455_019599

Neo: -

Age: Down-Up-Up

 0.952 - - 0.952 - - -

Mlig455_019376 {REF} {Length: 2305} {NoTransDecoderORF} {RNA1509_52124} {RNA1310_34899, RNA1509_52124} {RNA1509_52124, RNA815_4169}

Mlig455_019599 {REF} {Length: 785} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52124} {RNA1310_34899} {RNA815_4169}
57. MligTC455_27066 95 1.99 Mlig455_008802

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_008802 {REF} {Length: 1551} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
58. MligTC455_25820 32 0.67 Mlig455_061208

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_061208 {REF} {Length: 1262} {Celegans: WBGene00018026, F35A5.4, [Score=48.1, Expect=1e-06]} {RNA1310_123558}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA