M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27648

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27648 19 0.39 Mlig455_044670

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.920

 SZT2 Mlig455_044670 {REF} {Length: 12113} {Human: ENSG00000198198, SZT2, SZT2, KICSTOR complex subunit, [Score=82.4, Expect=2e-14]} {Mouse: ENSMUSG00000033253, Szt2, seizure threshold 2, [Score=74.3, Expect=4e-12]} {Smed: dd_Smed_v6_8946_0_1, dd_Smed_v6_8946_0_1, [Score=108, Expect=9e-23]} {RNA1509_25909} {RNA1310_92.1} {RNA815_13061}

Cumulative graph for MligTC455_27648

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.173 0.833 1.00000 1.00000
RegionR2 1.615 0.833 0.49807 0.87807
RegionR3 -0.296 0.833 1.00000 1.00000
RegionR4 1.556 0.833 0.12924 0.36364
RegionR5 0.206 0.833 0.99965 1.00000
RegionR6 -0.58 0.833 0.99982 1.00000
RegionR7 -0.98 0.833 0.99999 1.00000
RegionR8 -0.348 0.833 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.996 0.833 0.99979 1.00000
RegenerationR2 -1.417 0.833 0.33462 0.77038
RegenerationR3 0.568 0.833 0.40952 0.80801
RegenerationR4 0.506 0.833 0.78357 0.98207
RegenerationR5 1.875 0.833 0.37528 0.78407
RegenerationR6 2.37 0.833 0.31198 0.65985
RegenerationBL 1.522 0.833 0.37658 0.74507
RegenerationTP -0.96 0.833 0.99984 1.00000


Genes with expression patterns similar to MligTC455_27648

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27648 19 0.39 Mlig455_044670

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.920

 SZT2 3 - - 1.000 1.000 1.000 - Mlig455_044670 {REF} {Length: 12113} {Human: ENSG00000198198, SZT2, SZT2, KICSTOR complex subunit, [Score=82.4, Expect=2e-14]} {Mouse: ENSMUSG00000033253, Szt2, seizure threshold 2, [Score=74.3, Expect=4e-12]} {Smed: dd_Smed_v6_8946_0_1, dd_Smed_v6_8946_0_1, [Score=108, Expect=9e-23]} {RNA1509_25909} {RNA1310_92.1} {RNA815_13061}
2. MligTC455_36703 21 0.43 Mlig455_032688

Neo: -

Age: -

 1.719 - - 0.970 - 0.749 - Mlig455_032688 {REF} {Length: 7822} {RNA1509_59817} {RNA1310_14959.1} {RNA815_22311}
3. MligTC455_42507 6 0.13 Mlig455_003287

Neo: -

Age: -

 1.695 - - 0.966 - 0.729 - Mlig455_003287 {REF} {Length: 1202} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.6]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=48.1, Expect=7e-06]}
4. MligTC455_17679 365 7.59 Mlig455_007359, Mlig455_066674

Neo: -

Age: -

Region-enriched R2: 2.744/0.00362

 1.655 - - 0.952 - 0.703 -

Mlig455_007359 {REF} {Length: 1638} {RNA1509_18138} {RNA1310_24629} {RNA815_31762}

Mlig455_066674 {REF} {Length: 1869} {RNA1509_18138, RNA1509_36034} {RNA1310_24629, RNA1509_18138, RNA1509_36034} {RNA1509_18138, RNA1509_36034, RNA815_31762}
5. MligTC455_04675 3 0.07 Mlig455_041371

Neo: -

Age: Up-Down-Down

 1 - - 1.000 - - - Mlig455_041371 {REF} {Length: 2057} {RNA1509_29127} {RNA1310_6200} {RNA815_31134}
6. MligTC455_13060 99 2.06 Mlig455_022766

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_022766 {REF} {Length: 787} {NoTransDecoderORF} {RNA1310_132565}
7. MligTC455_24137 21 0.43 Mlig455_032992

Neo: -

Age: -

Region-enriched R4: 5.384/0.03048

 1 - - 1.000 - - - Mlig455_032992 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.1]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.8, Expect=3e-17]} {RNA1509_53407, RNA1509_59006} {RNA1310_19264, RNA1509_59006} {RNA1509_59006, RNA815_10011.2}
8. MligTC455_06678 10 0.22 Mlig455_051040

Neo: -

Age: -

 SLC7A1 0.995 - - 0.995 - - - Mlig455_051040 {REF} {Length: 1969} {Pfam: Amino acid permease [PF13520.8, score=122.2]; Amino acid permease [PF00324.23, score=107.8]; C-terminus of AA_permease [PF13906.8, score=56.1]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=297, Expect=3e-92]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=300, Expect=2e-93]; ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=297, Expect=3e-92]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [Score=290, Expect=5e-89]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [Score=290, Expect=5e-89]} {Dmel: FBgn0036984, CG13248, [Score=290, Expect=1e-89]} {Celegans: WBGene00016806, C50D2.2, [Score=293, Expect=1e-91]} {Smed: dd_Smed_v6_8652_0_4, dd_Smed_v6_8652_0_4, [Score=436, Expect=3e-147]} {RNA1310_82370} {RNA815_51664}
9. MligTC455_10602 7 0.14 Mlig455_069165

Neo: -

Age: -

 0.994 - - 0.994 - - - Mlig455_069165 {REF} {Length: 609}
10. MligTC455_11168 10 0.21 Mlig455_015184

Neo: -

Age: -

 0.994 - - 0.994 - - - Mlig455_015184 {REF} {Length: 1552} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_60529.2} {RNA815_62333}
11. MligTC455_13843 106 2.21 Mlig455_002736, Mlig455_063352

Neo: -

Age: -

 0.992 - - 0.992 - - -

Mlig455_002736 {REF} {Length: 2644} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=53.9, Expect=7e-09]}

Mlig455_063352 {REF} {Length: 1108} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=68.6, Expect=1e-13]}
12. MligTC455_09063 16 0.32 Mlig455_064012

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_064012 {REF} {Length: 6137} {Pfam: PHD-finger [PF00628.31, score=56.5]; Endonuclease-reverse transcriptase [PF14529.8, score=43.5]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=42.1]; Reverse transcriptase-like [PF13456.8, score=26.8]; Prokaryotic RING finger family 1 [PF14446.8, score=20.9]} {RNA1310_20747.1}
13. MligTC455_26072 48 1 Mlig455_002470, Mlig455_045913

Neo: -

Age: -

 0.988 - - 0.988 - - -

Mlig455_002470 {REF} {Length: 7792} {Pfam: Caspase domain [PF00656.24, score=40.7]} {Mouse: ENSMUSG00000026029, Casp8, caspase 8, [Score=52.0, Expect=2e-07]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=3e-09]} {Smed: dd_Smed_v6_8326_0_1, dd_Smed_v6_8326_0_1, [Score=47.8, Expect=1e-06]} {RNA1509_50272} {RNA1310_29664} {RNA815_7717.1}

Mlig455_045913 {REF} {Length: 5924} {Pfam: Caspase domain [PF00656.24, score=50.8]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=47.4, Expect=1e-05]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=58.2, Expect=3e-09]} {Smed: dd_Smed_v6_8326_0_1, dd_Smed_v6_8326_0_1, [Score=64.7, Expect=8e-12]} {RNA1509_50272} {RNA1310_29664} {RNA815_7717.1}
14. MligTC455_37330 64 1.32 Mlig455_050800, Mlig455_070183

Neo: -

Age: -

 0.988 - - 0.988 - - -

Mlig455_050800 {REF} {Length: 405} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_41194.1}

Mlig455_070183 {REF} {Length: 576} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
15. MligTC455_46952 43 0.9 Mlig455_031219

Neo: -

Age: -

Region-enriched R4: 5.444/0.03746

 0.987 - - 0.987 - - - Mlig455_031219 {REF} {Length: 735}
16. MligTC455_37762 25 0.51 Mlig455_024925, Mlig455_024958

Neo: -

Age: -

Region-enriched R2: 10.314/0.00053

 CHRNA7 0.983 - - - - 0.983 -

Mlig455_024925 {REF} {Length: 1846} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=135.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=118.5]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=218, Expect=8e-64]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=218, Expect=5e-64]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=217, Expect=6e-64]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=1e-61]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=218, Expect=3e-64]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=213, Expect=1e-62]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=209, Expect=5e-61]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=232, Expect=6e-69]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=219, Expect=3e-65]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=205, Expect=3e-59]} {RNA1310_18666.1} {RNA815_22720}

Mlig455_024958 {REF} {Length: 3129} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=135.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=118.5]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=218, Expect=8e-64]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=218, Expect=5e-64]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=217, Expect=6e-64]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=1e-61]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=218, Expect=3e-64]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=213, Expect=1e-62]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=209, Expect=5e-61]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=232, Expect=6e-69]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=219, Expect=3e-65]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=205, Expect=3e-59]} {RNA1509_23224, RNA1509_43289} {RNA1310_18666.1, RNA1509_23224, RNA1509_43289} {RNA1509_23224, RNA1509_43289, RNA815_22720}
17. MligTC455_48513 33 0.69 Mlig455_030896

Neo: -

Age: logFC(26M/2M)=1.097

 P2RX4 0.982 - - 0.982 - - - Mlig455_030896 {REF} {Length: 4263} {Pfam: ATP P2X receptor [PF00864.21, score=302.7]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=225, Expect=2e-67]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=208, Expect=4e-61]; ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=198, Expect=2e-56]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=278, Expect=9e-87]} {RNA1509_4774} {RNA1310_12543.1} {RNA815_4703.1}
18. MligTC455_51312 38 0.8 Mlig455_015513

Neo: -

Age: -

 0.982 - - 0.982 - - - Mlig455_015513 {REF} {Length: 670} {RNA1509_39535} {RNA1310_86982} {RNA815_28901}
19. MligTC455_01014 50 1.04 Mlig455_061332

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_061332 {REF} {Length: 923} {RNA1310_87489}
20. MligTC455_03555 28 0.59 Mlig455_009266

Neo: -

Age: Up-Up-Down

 0.979 - - 0.979 - - - Mlig455_009266 {REF} {Length: 1235} {NoTransDecoderORF} {RNA1509_42100} {RNA1310_56786} {RNA815_61979}
21. MligTC455_33449 53 1.11 Mlig455_048658, Mlig455_063410

Neo: -

Age: -

 0.979 - - 0.979 - - -

Mlig455_048658 {REF} {Length: 1769} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=86.3, Expect=5e-17]} {RNA1509_51537} {RNA1310_24973} {RNA815_7432}

Mlig455_063410 {REF} {Length: 2520} {Pfam: Sporozoite P67 surface antigen [PF05642.13, score=19.6]} {RNA1509_51537} {RNA1310_24973} {RNA815_7432}
22. MligTC455_50304 17 0.35 Mlig455_067422

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_067422 {REF} {Length: 751} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_82384} {RNA815_44872}
23. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 0.978 - - 0.978 - - - Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
24. MligTC455_27807 141 2.93 Mlig455_019560

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.009

 0.975 - - 0.975 - - - Mlig455_019560 {REF} {Length: 3424} {Pfam: Poxvirus A32 protein [PF04665.14, score=30.3]} {Celegans: WBGene00021498, Y40C7B.1, [RH, Score=66.2, Expect=3e-12]} {RNA1509_5514} {RNA1310_683.1} {RNA815_1542.1}
25. MligTC455_43675 75 1.56 Mlig455_046679

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_046679 {REF} {Length: 2337} {RNA1509_19077} {RNA1310_37453.1} {RNA815_8862.2}
26. MligTC455_37865 2608 54.33 Mlig455_011086

Neo: Int S/G2/M

Age: logFC(26M/2M)=2.454

Region-enriched R4: 2.125/0.01250

 RPL28 0.974 - - 0.974 - - - Mlig455_011086 {REF} {Length: 624} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=95.9]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=119, Expect=5e-35]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=119, Expect=3e-35]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=96.7, Expect=2e-26]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [RH, Score=50.1, Expect=1e-08]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [Score=54.3, Expect=2e-10]} {RNA1509_359} {RNA1310_55482} {RNA815_27285}
27. MligTC455_47410 144 3 Mlig455_066471

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_066471 {REF} {Length: 690} {NoTransDecoderORF} {RNA1509_9488} {RNA1310_3197} {RNA815_3130}
28. MligTC455_07736 28 0.58 Mlig455_008920

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_008920 {REF} {Length: 531} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_6578} {RNA815_48322}
29. MligTC455_10729 44 0.93 Mlig455_011434

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_011434 {REF} {Length: 429} {NoTransDecoderORF} {RNA1509_36541} {RNA1310_37624} {RNA815_20457.1}
30. MligTC455_11804 40 0.84 Mlig455_049994, Mlig455_050022

Neo: -

Age: Up-Down-Up

 0.972 - - 0.972 - - -

Mlig455_049994 {REF} {Length: 2541} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}

Mlig455_050022 {REF} {Length: 1815} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}
31. MligTC455_22973 69 1.43 Mlig455_035875, Mlig455_035912, Mlig455_035913

Neo: -

Age: -

 0.97 - - 0.970 - - -

Mlig455_035875 {REF} {Length: 3712} {NoTransDecoderORF} {RNA1310_130183} {RNA815_30776}

Mlig455_035912 {REF} {Length: 1408} {NoTransDecoderORF} {RNA1310_102146} {RNA815_30776}

Mlig455_035913 {REF} {Length: 776} {NoTransDecoderORF} {RNA1310_29036.3}
32. MligTC455_38016 51 1.07 Mlig455_054344

Neo: -

Age: Down-Up-Down

 CFAP53 0.97 - - 0.970 - - - Mlig455_054344 {REF} {Length: 2687} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=77.5]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=172, Expect=9e-47]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=166, Expect=7e-45]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=1e-96]} {RNA1509_1100} {RNA1310_13648, RNA1509_1100} {RNA1509_1100, RNA815_5728}
33. MligTC455_37195 68 1.41 Mlig455_033638, Mlig455_033665

Neo: -

Age: Up-Down-Down

 ASIC1 0.969 - - 0.969 - - -

Mlig455_033638 {REF} {Length: 3007} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=199.6]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=60.8, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=55.8, Expect=1e-07]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [RH, Score=483, Expect=5e-165]} {RNA1509_46829} {RNA1310_13649} {RNA815_15065}

Mlig455_033665 {REF} {Length: 4082} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=199.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=56.6, Expect=6e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=68.6, Expect=9e-12]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [RH, Score=483, Expect=8e-165]} {RNA1509_46829} {RNA1310_13649, RNA1509_46829} {RNA1509_46829, RNA815_15065}
34. MligTC455_14889 208 4.32 Mlig455_006489, Mlig455_042232, Mlig455_056390, Mlig455_058598, Mlig455_070107, Mlig455_070775

Neo: -

Age: -

 0.967 - - 0.967 - - -

Mlig455_006489 {REF} {Length: 2624} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_042232 {REF} {Length: 2149} {TRANSSPLICED} {RNA1509_40891} {RNA1310_12069} {RNA815_24445}

Mlig455_056390 {REF} {Length: 4036} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_058598 {REF} {Length: 4352} {Pfam: Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=23.1]} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_070107 {REF} {Length: 2001} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_070775 {REF} {Length: 4555} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}
35. MligTC455_21762 134 2.8 Mlig455_031432

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_031432 {REF} {Length: 284} {NoTransDecoderORF} {RNA1509_42914} {RNA1310_99471} {RNA815_64986}
36. MligTC455_13658 26 0.53 Mlig455_063501

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_063501 {REF} {Length: 1954} {RNA1310_18636.2} {RNA815_32755}
37. MligTC455_37458 120 2.49 Mlig455_037280, Mlig455_042333, Mlig455_055120

Neo: -

Age: -

 CUBN 0.966 - - 0.966 - - -

Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
38. MligTC455_43561 47 0.98 Mlig455_019076, Mlig455_064291

Neo: -

Age: -

 ASIC3 0.966 - - 0.966 - - -

Mlig455_019076 {REF} {Length: 2496} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=274.8]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [RH, Score=122, Expect=5e-29]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=114, Expect=1e-26]} {Dmel: FBgn0030795, ppk28, pickpocket 28, [Score=58.5, Expect=9e-09]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=133, Expect=5e-33]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [Score=127, Expect=4e-31]} {RNA1509_37765} {RNA1310_15854} {RNA815_39159}

Mlig455_064291 {REF} {Length: 2206} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=52.6]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=46.6, Expect=1e-06]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=47.8, Expect=1e-07]} {RNA1509_37765} {RNA1310_15854} {RNA815_28789}
39. MligTC455_33849 62 1.29 Mlig455_006861

Neo: -

Age: -

 GRIK5 0.965 - - 0.965 - - - Mlig455_006861 {REF} {Length: 2491} {Pfam: Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=25.5]} {Human: ENSG00000105737, GRIK5, glutamate ionotropic receptor kainate type subunit 5, [Score=78.2, Expect=8e-16]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=77.8, Expect=1e-15]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=78.6, Expect=5e-16]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=78.6, Expect=5e-16]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=79.7, Expect=1e-16]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=82.8, Expect=1e-17]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=143, Expect=1e-38]} {RNA1310_42312} {RNA815_56269}
40. MligTC455_17210 20 0.42 Mlig455_055047

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_055047 {REF} {Length: 1907} {RNA1310_63298} {RNA815_53381}
41. MligTC455_14883 116 2.43 Mlig455_026039, Mlig455_064434

Neo: -

Age: -

 CALML3 0.963 - - 0.963 - - -

Mlig455_026039 {REF} {Length: 1444} {Pfam: EF hand [PF00036.34, score=58.4]; EF-hand domain pair [PF13499.8, score=57.2]; EF-hand domain [PF13405.8, score=48.7]; EF hand [PF13202.8, score=44.0]; EF-hand domain pair [PF13833.8, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=21.0]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=72.8, Expect=7e-17]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=50.8, Expect=2e-08]} {Celegans: WBGene00000287, cal-3, CALmodulin related genes, [Score=57.4, Expect=5e-11]} {Smed: dd_Smed_v6_4512_0_2, dd_Smed_v6_4512_0_2, [Score=50.1, Expect=3e-08]} {RNA1310_61122} {RNA815_63946}

Mlig455_064434 {REF} {Length: 1538} {Pfam: EF hand [PF00036.34, score=26.6]; EF-hand domain [PF13405.8, score=26.5]; EF hand [PF13202.8, score=23.9]; EF-hand domain pair [PF13499.8, score=20.8]} {RNA1310_61122} {RNA815_63946}
42. MligTC455_01119 28 0.59 Mlig455_046582

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_046582 {REF} {Length: 361} {NoTransDecoderORF} {RNA1509_37367} {RNA1310_41038} {RNA815_15609}
43. MligTC455_19576 13 0.28 Mlig455_052862

Neo: -

Age: -

 TXNRD2 0.962 - - 0.962 - - - Mlig455_052862 {REF} {Length: 3514} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=168.4]; LCCL domain [PF03815.21, score=76.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=72.7]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.4]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.0]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=27.2]; FAD binding domain [PF00890.26, score=22.5]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=22.2]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.7]; HI0933-like protein [PF03486.16, score=18.5]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=3e-133]} {Mouse: ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=454, Expect=9e-151]; ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=454, Expect=9e-151]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=422, Expect=8e-139]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=382, Expect=2e-123]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=429, Expect=1e-141]} {RNA1509_26325} {RNA1310_14820} {RNA815_14934}
44. MligTC455_54003 26 0.54 Mlig455_042178

Neo: -

Age: Up-Down-Up

 FOXL1 0.962 - - 0.962 - - - Mlig455_042178 {REF} {Length: 2401} {Pfam: Forkhead domain [PF00250.20, score=136.8]} {Human: ENSG00000176678, FOXL1, forkhead box L1, [RH, Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000097084, Foxl1, forkhead box L1, [RH, Score=191, Expect=1e-57]} {Dmel: FBgn0014143, croc, crocodile, [Score=154, Expect=3e-42]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=150, Expect=2e-41]} {Smed: dd_Smed_v6_19255_0_1, dd_Smed_v6_19255_0_1, [RH, Score=184, Expect=9e-56]} {RNA1310_37643} {RNA815_48578}
45. MligTC455_29454 50 1.05 Mlig455_065107

Neo: -

Age: -

 CHRNA10 0.961 - - 0.961 - - - Mlig455_065107 {REF} {Length: 3864} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=79.6]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=64.7, Expect=5e-11]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=61.6, Expect=5e-10]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00000051, acr-12, AcetylCholine Receptor; Nicotinic acetylcholine receptor-like subunit ACR-12, [Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=74.7, Expect=6e-15]} {RNA1509_57562} {RNA1310_27363} {RNA815_5685.1}
46. MligTC455_39002 35 0.72 Mlig455_041561

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_041561 {REF} {Length: 743} {NoTransDecoderORF} {RNA1509_13203} {RNA1310_24973} {RNA815_7432}
47. MligTC455_33725 46 0.96 Mlig455_059862

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
48. MligTC455_39455 42 0.87 Mlig455_036460

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_036460 {REF} {Length: 1044} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
49. MligTC455_26285 1067 22.23 Mlig455_041966

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.613

Regeneration-enriched TP: 3.474
Regeneration-enriched BL: 3.163

 KLF18 0.957 - - 0.957 - - - Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}
50. MligTC455_12958 55 1.15 Mlig455_055683

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_055683 {REF} {Length: 1376}
51. MligTC455_29262 96 2 Mlig455_038249

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.738

 0.956 - - 0.956 - - - Mlig455_038249 {REF} {Length: 8932} {RNA1509_25125, RNA1509_25587, RNA1509_9188} {RNA1310_234.1, RNA1509_25125, RNA1509_25587} {RNA1509_25125, RNA1509_25587, RNA815_23.1}
52. MligTC455_18093 42 0.87 Mlig455_056859

Neo: -

Age: -

 ARL3 0.955 - - 0.955 - - - Mlig455_056859 {REF} {Length: 1943} {Pfam: ADP-ribosylation factor family [PF00025.23, score=67.8]; 50S ribosome-binding GTPase [PF01926.25, score=26.5]; G-protein alpha subunit [PF00503.22, score=18.9]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=67.8, Expect=2e-13]; ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=67.8, Expect=3e-13]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=65.1, Expect=2e-12]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=65.1, Expect=2e-12]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=64.7, Expect=4e-12]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=67.4, Expect=2e-13]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=66.6, Expect=4e-13]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=65.1, Expect=1e-12]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=64.3, Expect=3e-12]} {Dmel: FBgn0013749, Arf102F, ADP ribosylation factor at 102F, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=65.5, Expect=5e-13]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=78.6, Expect=7e-18]} {RNA1310_41790} {RNA815_35492}
53. MligTC455_35552 32 0.67 Mlig455_035296

Neo: -

Age: -

 SCNN1B 0.955 - - 0.955 - - - Mlig455_035296 {REF} {Length: 3475} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=357, Expect=9e-114]} {RNA1509_53211} {RNA1310_6642.3, RNA1509_53211} {RNA1509_53211, RNA815_12322}
54. MligTC455_20733 112 2.33 Mlig455_001969

Neo: Int S/G2/M

Age: -

Region-enriched R4: 5.601/0.00233

 0.954 - - 0.954 - - - Mlig455_001969 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_88179}
55. MligTC455_21189 14 0.29 Mlig455_059078

Neo: -

Age: -

 CALCR 0.953 - - 0.953 - - - Mlig455_059078 {REF} {Length: 2778} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=156.6]} {Human: ENSG00000004948, CALCR, calcitonin receptor, [Score=124, Expect=6e-31]; ENSG00000276191, CRHR1, corticotropin releasing hormone receptor 1, [Score=121, Expect=1e-30]; ENSG00000278232, CRHR1, corticotropin releasing hormone receptor 1, [Score=121, Expect=1e-30]; ENSG00000120088, CRHR1, corticotropin releasing hormone receptor 1, [Score=121, Expect=1e-30]; ENSG00000080293, SCTR, secretin receptor, [Score=120, Expect=1e-29]; ENSG00000106113, CRHR2, corticotropin releasing hormone receptor 2, [Score=118, Expect=3e-29]} {Mouse: ENSMUSG00000023964, Calcr, calcitonin receptor, [Score=124, Expect=3e-31]; ENSMUSG00000018634, Crhr1, corticotropin releasing hormone receptor 1, [Score=123, Expect=2e-31]; ENSMUSG00000003476, Crhr2, corticotropin releasing hormone receptor 2, [Score=122, Expect=9e-31]; ENSMUSG00000026387, Sctr, secretin receptor, [Score=121, Expect=2e-30]} {Dmel: FBgn0260753, Pdfr, Pigment-dispersing factor receptor, [Score=199, Expect=9e-58]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_22246_0_1, dd_Smed_v6_22246_0_1, [Score=168, Expect=2e-48]} {RNA1509_22951} {RNA1310_13608.1} {RNA815_31126}
56. MligTC455_31899 54 1.12 Mlig455_038388

Neo: -

Age: logFC(26M/2M)=-0.361

 0.953 - - 0.953 - - - Mlig455_038388 {REF} {Length: 5705} {Mouse: ENSMUSG00000034156, Tspoap1, TSPO associated protein 1, [Score=57.4, Expect=5e-08]} {Smed: dd_Smed_v6_9824_0_1, dd_Smed_v6_9824_0_1, [Score=60.5, Expect=2e-09]} {RNA1509_50962} {RNA1310_2550.1} {RNA815_706}
57. MligTC455_51807 28 0.59 Mlig455_046394

Neo: -

Age: -

 GPSM2 0.953 - - 0.953 - - - Mlig455_046394 {REF} {Length: 3388} {Pfam: Tetratricopeptide repeat [PF13424.8, score=114.4]; Tetratricopeptide repeat [PF13176.8, score=96.0]; Tetratricopeptide repeat [PF00515.30, score=94.3]; GoLoco motif [PF02188.19, score=85.6]; Tetratricopeptide repeat [PF07719.19, score=55.0]; Tetratricopeptide repeat [PF13181.8, score=42.2]; Tetratricopeptide repeat [PF13374.8, score=32.8]; Rapsyn N-terminal myristoylation and linker region [PF10579.11, score=20.1]} {Human: ENSG00000121957, GPSM2, G protein signaling modulator 2, [RH, Score=542, Expect=0.0]} {Mouse: ENSMUSG00000027883, Gpsm2, G-protein signalling modulator 2 (AGS3-like, C. elegans), [RH, Score=532, Expect=1e-180]; ENSMUSG00000026930, Gpsm1, G-protein signalling modulator 1 (AGS3-like, C. elegans), [RH, Score=511, Expect=1e-172]} {Dmel: FBgn0040080, pins, partner of inscuteable, [RH, Score=530, Expect=2e-180]} {Celegans: WBGene00000092, ags-3, Activator of G protein Signalling, [RH, Score=266, Expect=7e-80]} {Smed: dd_Smed_v6_6548_1_1, dd_Smed_v6_6548_1_1, [RH, Score=477, Expect=1e-159]} {RNA1310_18538} {RNA815_41322}
58. MligTC455_40649 24 0.49 Mlig455_066232

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_066232 {REF} {Length: 2453} {RNA1310_42980.1} {RNA815_47590}
59. MligTC455_49402 105 2.18 Mlig455_046565

Neo: -

Age: -

 GLRA2 0.951 - - 0.951 - - - Mlig455_046565 {REF} {Length: 2587} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=137.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=103.6]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=278, Expect=2e-87]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=273, Expect=2e-85]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=269, Expect=1e-83]; ENSG00000109738, GLRB, glycine receptor beta, [Score=266, Expect=4e-82]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=277, Expect=4e-87]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=272, Expect=4e-85]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=268, Expect=4e-83]} {Dmel: FBgn0024963, GluClalpha, [Score=252, Expect=1e-77]} {Celegans: WBGene00000233, avr-15, GluClalpha2B protein, [RH, Score=248, Expect=3e-74]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=297, Expect=3e-95]} {RNA1310_46762} {RNA815_47984}
60. MligTC455_21555 70 1.46 Mlig455_014351

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_014351 {REF} {Length: 4507} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=69.9]} {RNA1509_41009} {RNA1310_68932} {RNA815_36459}
61. MligTC455_27066 95 1.99 Mlig455_008802

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_008802 {REF} {Length: 1551} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
62. MligTC455_43212 25 0.51 Mlig455_030578

Neo: -

Age: -

 ZNF16 0.95 - - 0.950 - - - Mlig455_030578 {REF} {Length: 1942} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=55.4]; Zinc finger, C2H2 type [PF00096.28, score=51.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=38.5]; Zinc-finger of C2H2 type [PF12874.9, score=34.0]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=25.9]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.8]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=19.4]} {Human: ENSG00000170631, ZNF16, zinc finger protein 16, [Score=84.7, Expect=6e-17]; ENSG00000178175, ZNF366, zinc finger protein 366, [Score=82.0, Expect=4e-16]; ENSG00000213973, ZNF99, zinc finger protein 99, [Score=81.6, Expect=7e-16]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=80.5, Expect=2e-15]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=80.5, Expect=9e-16]} {Mouse: ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=83.2, Expect=7e-17]; ENSMUSG00000050919, Zfp366, zinc finger protein 366, [Score=80.1, Expect=1e-15]} {Dmel: FBgn0038550, CG17801, [Score=68.9, Expect=2e-12]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=57.8, Expect=4e-09]} {RNA1509_14767, RNA1509_19735} {RNA1310_5349, RNA1509_19735} {RNA1509_19735, RNA815_28876}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA