M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_39002

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39002 35 0.72 Mlig455_041561

Neo: -

Age: -

 Mlig455_041561 {REF} {Length: 743} {NoTransDecoderORF} {RNA1509_13203} {RNA1310_24973} {RNA815_7432}

Cumulative graph for MligTC455_39002

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.171 0.778 0.99995 1.00000
RegionR2 4.117 0.778 1.00000 1.00000
RegionR3 0.294 0.778 0.99994 1.00000
RegionR4 -0.572 0.778 0.99967 1.00000
RegionR5 -0.735 0.778 0.99988 1.00000
RegionR6 -1.045 0.778 0.99988 1.00000
RegionR7 -0.833 0.778 0.99990 1.00000
RegionR8 -0.056 0.778 0.99993 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.717 0.778 0.99996 1.00000
RegenerationR2 -1.898 0.778 0.00612 0.12519
RegenerationR3 -0.539 0.778 0.99990 1.00000
RegenerationR4 -1.166 0.778 0.99952 1.00000
RegenerationR5 0.391 0.778 0.99960 1.00000
RegenerationR6 -0.598 0.778 0.99965 1.00000
RegenerationBL -0.568 0.778 0.99995 1.00000
RegenerationTP 2.798 0.778 1.00000 1.00000


Genes with expression patterns similar to MligTC455_39002

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39002 35 0.72 Mlig455_041561

Neo: -

Age: -

 2 - - 1.000 - 1.000 - Mlig455_041561 {REF} {Length: 743} {NoTransDecoderORF} {RNA1509_13203} {RNA1310_24973} {RNA815_7432}
2. MligTC455_37458 120 2.49 Mlig455_037280, Mlig455_042333, Mlig455_055120

Neo: -

Age: -

 CUBN 1.767 - - 0.957 - 0.810 -

Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
3. MligTC455_33449 53 1.11 Mlig455_048658, Mlig455_063410

Neo: -

Age: -

 1.678 - - 0.974 - 0.704 -

Mlig455_048658 {REF} {Length: 1769} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=86.3, Expect=5e-17]} {RNA1509_51537} {RNA1310_24973} {RNA815_7432}

Mlig455_063410 {REF} {Length: 2520} {Pfam: Sporozoite P67 surface antigen [PF05642.13, score=19.6]} {RNA1509_51537} {RNA1310_24973} {RNA815_7432}
4. MligTC455_01014 50 1.04 Mlig455_061332

Neo: -

Age: -

 1.664 - - 0.957 - 0.707 - Mlig455_061332 {REF} {Length: 923} {RNA1310_87489}
5. MligTC455_17210 20 0.42 Mlig455_055047

Neo: -

Age: -

 0.999 - - 0.999 - - - Mlig455_055047 {REF} {Length: 1907} {RNA1310_63298} {RNA815_53381}
6. MligTC455_07736 28 0.58 Mlig455_008920

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_008920 {REF} {Length: 531} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_6578} {RNA815_48322}
7. MligTC455_07516 112 2.34 Mlig455_060804

Neo: -

Age: -

 0.995 - - 0.995 - - - Mlig455_060804 {REF} {Length: 844} {Pfam: Presenilin [PF01080.19, score=19.5]} {RNA1509_21195} {RNA1310_23162} {RNA815_26275}
8. MligTC455_39001 28 0.57 Mlig455_027878

Neo: -

Age: -

 0.992 - - 0.992 - - - Mlig455_027878 {REF} {Length: 1017} {NoTransDecoderORF} {RNA1509_13203} {RNA1310_24973} {RNA815_7432}
9. MligTC455_29454 50 1.05 Mlig455_065107

Neo: -

Age: -

 CHRNA10 0.99 - - 0.990 - - - Mlig455_065107 {REF} {Length: 3864} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=79.6]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=64.7, Expect=5e-11]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=61.6, Expect=5e-10]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00000051, acr-12, AcetylCholine Receptor; Nicotinic acetylcholine receptor-like subunit ACR-12, [Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=74.7, Expect=6e-15]} {RNA1509_57562} {RNA1310_27363} {RNA815_5685.1}
10. MligTC455_50304 17 0.35 Mlig455_067422

Neo: -

Age: -

 0.988 - - 0.988 - - - Mlig455_067422 {REF} {Length: 751} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_82384} {RNA815_44872}
11. MligTC455_10729 44 0.93 Mlig455_011434

Neo: -

Age: -

 0.987 - - 0.987 - - - Mlig455_011434 {REF} {Length: 429} {NoTransDecoderORF} {RNA1509_36541} {RNA1310_37624} {RNA815_20457.1}
12. MligTC455_11804 40 0.84 Mlig455_049994, Mlig455_050022

Neo: -

Age: Up-Down-Up

 0.987 - - 0.987 - - -

Mlig455_049994 {REF} {Length: 2541} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}

Mlig455_050022 {REF} {Length: 1815} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}
13. MligTC455_23129 58 1.21 Mlig455_019471

Neo: -

Age: -

Region-enriched R4: 3.358/0.03401

 0.986 - - 0.986 - - - Mlig455_019471 {REF} {Length: 1198} {Pfam: F5/8 type C domain [PF00754.27, score=36.6]; PAN domain [PF00024.28, score=22.7]} {RNA1310_33845.2} {RNA815_3664.1}
14. MligTC455_23130 57 1.18 Mlig455_066882

Neo: -

Age: -

 0.986 - - 0.986 - - - Mlig455_066882 {REF} {Length: 1287} {Pfam: F5/8 type C domain [PF00754.27, score=36.4]; PAN domain [PF00024.28, score=21.3]} {RNA1310_33845.2} {RNA815_3664.1}
15. MligTC455_43675 75 1.56 Mlig455_046679

Neo: -

Age: -

 0.986 - - 0.986 - - - Mlig455_046679 {REF} {Length: 2337} {RNA1509_19077} {RNA1310_37453.1} {RNA815_8862.2}
16. MligTC455_33725 46 0.96 Mlig455_059862

Neo: -

Age: -

 0.983 - - 0.983 - - - Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
17. MligTC455_46952 43 0.9 Mlig455_031219

Neo: -

Age: -

Region-enriched R4: 5.444/0.03746

 0.982 - - 0.982 - - - Mlig455_031219 {REF} {Length: 735}
18. MligTC455_53891 11 0.24 Mlig455_005871

Neo: -

Age: -

 RFESD 0.981 - - 0.981 - - - Mlig455_005871 {REF} {Length: 1144} {Pfam: Rieske [2Fe-2S] domain [PF00355.28, score=37.2]; Rieske-like [2Fe-2S] domain [PF13806.8, score=31.2]} {Human: ENSG00000175449, RFESD, Rieske Fe-S domain containing, [Score=60.1, Expect=3e-12]} {Mouse: ENSMUSG00000043190, Rfesd, Rieske (Fe-S) domain containing, [Score=60.1, Expect=5e-12]} {RNA1310_47705} {RNA815_49197}
19. MligTC455_02548 38 0.79 Mlig455_018036

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_018036 {REF} {Length: 1415} {Pfam: RNase H [PF00075.26, score=48.1]} {RNA1310_45628} {RNA815_47624}
20. MligTC455_06678 10 0.22 Mlig455_051040

Neo: -

Age: -

 SLC7A1 0.977 - - 0.977 - - - Mlig455_051040 {REF} {Length: 1969} {Pfam: Amino acid permease [PF13520.8, score=122.2]; Amino acid permease [PF00324.23, score=107.8]; C-terminus of AA_permease [PF13906.8, score=56.1]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=297, Expect=3e-92]} {Mouse: ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=300, Expect=2e-93]; ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=297, Expect=3e-92]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [Score=290, Expect=5e-89]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [Score=290, Expect=5e-89]} {Dmel: FBgn0036984, CG13248, [Score=290, Expect=1e-89]} {Celegans: WBGene00016806, C50D2.2, [Score=293, Expect=1e-91]} {Smed: dd_Smed_v6_8652_0_4, dd_Smed_v6_8652_0_4, [Score=436, Expect=3e-147]} {RNA1310_82370} {RNA815_51664}
21. MligTC455_07576 29 0.6 Mlig455_006213

Neo: -

Age: -

 0.976 - - 0.976 - - - Mlig455_006213 {REF} {Length: 257} {NoTransDecoderORF}
22. MligTC455_20800 22 0.46 Mlig455_036668

Neo: Germline

Age: -

 0.976 - - 0.976 - - - Mlig455_036668 {REF} {Length: 967} {RNA1310_38630} {RNA815_25111}
23. MligTC455_41383 18 0.38 Mlig455_035165

Neo: -

Age: -

Region-enriched R4: 6.475/0.02758

 0.976 - - 0.976 - - - Mlig455_035165 {REF} {Length: 645} {NoTransDecoderORF} {RNA1310_64610} {RNA815_33970}
24. MligTC455_52984 33 0.68 Mlig455_019834

Neo: -

Age: -

Region-enriched R4: 4.044/0.04428

 0.976 - - 0.976 - - - Mlig455_019834 {REF} {Length: 1707} {TRANSSPLICED}
25. MligTC455_53664 95 1.98 Mlig455_009492

Neo: -

Age: -

 0.976 - - 0.976 - - - Mlig455_009492 {REF} {Length: 6572} {RNA1509_42922} {RNA1310_48548} {RNA815_18455}
26. MligTC455_13658 26 0.53 Mlig455_063501

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_063501 {REF} {Length: 1954} {RNA1310_18636.2} {RNA815_32755}
27. MligTC455_45095 685 14.28 Mlig455_027545

Neo: -

Age: Down-Up-Up

Region-enriched R8: 2.453/0.00108
Region-enriched R2: 2.319/0.00368

Regeneration-downregulated BL: -7.982

Regeneration-depleted BL: -7.982

 0.975 - - - - 0.975 - Mlig455_027545 {REF} {Length: 449} {RNA1509_40580} {RNA1310_73550} {RNA815_38029}
28. MligTC455_48513 33 0.69 Mlig455_030896

Neo: -

Age: logFC(26M/2M)=1.097

 P2RX4 0.975 - - 0.975 - - - Mlig455_030896 {REF} {Length: 4263} {Pfam: ATP P2X receptor [PF00864.21, score=302.7]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=225, Expect=2e-67]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=208, Expect=4e-61]; ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=198, Expect=2e-56]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=278, Expect=9e-87]} {RNA1509_4774} {RNA1310_12543.1} {RNA815_4703.1}
29. MligTC455_00974 117 2.43 Mlig455_065860

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_065860 {REF} {Length: 728} {NoTransDecoderORF}
30. MligTC455_03555 28 0.59 Mlig455_009266

Neo: -

Age: Up-Up-Down

 0.974 - - 0.974 - - - Mlig455_009266 {REF} {Length: 1235} {NoTransDecoderORF} {RNA1509_42100} {RNA1310_56786} {RNA815_61979}
31. MligTC455_14889 208 4.32 Mlig455_006489, Mlig455_042232, Mlig455_056390, Mlig455_058598, Mlig455_070107, Mlig455_070775

Neo: -

Age: -

 0.974 - - 0.974 - - -

Mlig455_006489 {REF} {Length: 2624} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_042232 {REF} {Length: 2149} {TRANSSPLICED} {RNA1509_40891} {RNA1310_12069} {RNA815_24445}

Mlig455_056390 {REF} {Length: 4036} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_058598 {REF} {Length: 4352} {Pfam: Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=23.1]} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_070107 {REF} {Length: 2001} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}

Mlig455_070775 {REF} {Length: 4555} {RNA1509_43399} {RNA1310_12943} {RNA815_24445}
32. MligTC455_37399 85 1.77 Mlig455_050897

Neo: Int S/G2/M

Age: -

 TREX1 0.974 - - - - 0.974 - Mlig455_050897 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=26.7]} {Human: ENSG00000213689, TREX1, three prime repair exonuclease 1, [RH, Score=104, Expect=7e-26]} {Mouse: ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [Score=94.0, Expect=9e-23]; ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [Score=93.2, Expect=6e-22]} {Dmel: FBgn0031484, CG3165, [Score=70.1, Expect=1e-13]} {RNA1509_32322} {RNA1310_41251, RNA1509_32322} {RNA1509_32322, RNA815_48691}
33. MligTC455_28285 101 2.1 Mlig455_001431

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_001431 {REF} {Length: 2576} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_22744} {RNA815_9674}
34. MligTC455_12958 55 1.15 Mlig455_055683

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_055683 {REF} {Length: 1376}
35. MligTC455_37330 64 1.32 Mlig455_050800, Mlig455_070183

Neo: -

Age: -

 0.972 - - 0.972 - - -

Mlig455_050800 {REF} {Length: 405} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_41194.1}

Mlig455_070183 {REF} {Length: 576} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
36. MligTC455_27068 159 3.31 Mlig455_014441, Mlig455_040371

Neo: -

Age: -

 0.971 - - 0.971 - - -

Mlig455_014441 {REF} {Length: 484} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_99471} {RNA815_64986}

Mlig455_040371 {REF} {Length: 1674} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
37. MligTC455_50219 35 0.73 Mlig455_006785

Neo: -

Age: -

 0.971 - - 0.971 - - - Mlig455_006785 {REF} {Length: 787} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=67.2]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=55.5, Expect=9e-10]} {RNA1509_47645} {RNA1310_28371} {RNA815_4577.1}
38. MligTC455_29940 77 1.61 Mlig455_034001

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_034001 {REF} {Length: 682} {RNA1310_20478} {RNA815_17869}
39. MligTC455_29941 78 1.63 Mlig455_060382

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.608

 EEFSEC 0.968 - - 0.968 - - - Mlig455_060382 {REF} {Length: 3426} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=97.7]; ERCC4 domain [PF02732.17, score=62.1]; Elongation factor Tu domain 2 [PF03144.27, score=29.4]; 50S ribosome-binding GTPase [PF01926.25, score=26.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=21.6]} {Human: ENSG00000132394, EEFSEC, eukaryotic elongation factor, selenocysteine-tRNA specific, [Score=427, Expect=9e-138]; ENSG00000284869, EEFSEC, eukaryotic elongation factor, selenocysteine-tRNA specific, [Score=427, Expect=9e-138]} {Mouse: ENSMUSG00000033216, Eefsec, eukaryotic elongation factor, selenocysteine-tRNA-specific, [Score=420, Expect=6e-136]} {Dmel: FBgn0034627, eEFSec, eukaryotic translation elongation factor, selenocysteine-specific, [Score=365, Expect=2e-115]} {Celegans: WBGene00008133, efsc-1, Eukaryotic Elongation Factor, SelenoCysteine-tRNA-specific, [Score=184, Expect=1e-49]} {Smed: dd_Smed_v6_4481_0_1, dd_Smed_v6_4481_0_1, [Score=388, Expect=1e-123]} {RNA1509_11359} {RNA1310_13242.1} {RNA815_31217}
40. MligTC455_13843 106 2.21 Mlig455_002736, Mlig455_063352

Neo: -

Age: -

 0.967 - - 0.967 - - -

Mlig455_002736 {REF} {Length: 2644} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=53.9, Expect=7e-09]}

Mlig455_063352 {REF} {Length: 1108} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=68.6, Expect=1e-13]}
41. MligTC455_18098 41 0.86 Mlig455_009640, Mlig455_037065, Mlig455_037077

Neo: -

Age: Down-Up-Down

 TLL2 0.967 - - 0.967 - - -

Mlig455_009640 {REF} {Length: 3563} {Pfam: CUB domain [PF00431.22, score=159.2]} {Human: ENSG00000095587, TLL2, tolloid like 2, [Score=95.5, Expect=2e-19]; ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=93.6, Expect=8e-19]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=99.8, Expect=8e-21]} {Dmel: FBgn0261262, CG42613, [RH, Score=301, Expect=2e-86]} {Celegans: WBGene00002977, lev-10, LEV-10B, [RH, Score=249, Expect=5e-70]} {Smed: dd_Smed_v6_11447_0_1, dd_Smed_v6_11447_0_1, [Score=456, Expect=2e-144]} {RNA1509_40917} {RNA1310_5203.2} {RNA815_10358}

Mlig455_037065 {REF} {Length: 3588} {Pfam: CUB domain [PF00431.22, score=159.1]} {Human: ENSG00000095587, TLL2, tolloid like 2, [Score=95.5, Expect=3e-19]; ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=94.4, Expect=6e-19]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=99.4, Expect=1e-20]} {Dmel: FBgn0261262, CG42613, [RH, Score=300, Expect=6e-86]} {Celegans: WBGene00002977, lev-10, LEV-10B, [RH, Score=252, Expect=2e-70]} {Smed: dd_Smed_v6_11447_0_1, dd_Smed_v6_11447_0_1, [Score=461, Expect=2e-146]} {RNA1509_40917} {RNA1310_5203.2} {RNA815_10358}

Mlig455_037077 {REF} {Length: 2905} {Pfam: CUB domain [PF00431.22, score=159.3]} {Human: ENSG00000095587, TLL2, tolloid like 2, [Score=95.9, Expect=2e-19]; ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=94.0, Expect=7e-19]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=100, Expect=6e-21]} {Dmel: FBgn0261262, CG42613, [RH, Score=302, Expect=1e-86]} {Celegans: WBGene00002977, lev-10, LEV-10B, [RH, Score=249, Expect=2e-69]} {Smed: dd_Smed_v6_11447_0_1, dd_Smed_v6_11447_0_1, [Score=457, Expect=3e-145]} {RNA1509_40917} {RNA1310_5203.2} {RNA815_10358}
42. MligTC455_45893 211 4.4 Mlig455_026742, Mlig455_051753

Neo: -

Age: -

 GRAMD4 0.967 - - 0.967 - - -

Mlig455_026742 {REF} {Length: 3564} {Pfam: GRAM domain [PF02893.22, score=38.6]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=34.6]; Integral peroxisomal membrane peroxin [PF06398.13, score=26.8]; Protein of unknown function (DUF3292) [PF11696.10, score=25.2]} {Human: ENSG00000075240, GRAMD4, GRAM domain containing 4, [RH, Score=230, Expect=1e-66]} {Mouse: ENSMUSG00000035900, Gramd4, GRAM domain containing 4, [RH, Score=235, Expect=5e-68]} {RNA1509_56811} {RNA1310_5024} {RNA815_10887}

Mlig455_051753 {REF} {Length: 3472} {Pfam: GRAM domain [PF02893.22, score=38.6]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=34.6]; Integral peroxisomal membrane peroxin [PF06398.13, score=26.8]; Protein of unknown function (DUF3292) [PF11696.10, score=25.2]} {Human: ENSG00000075240, GRAMD4, GRAM domain containing 4, [RH, Score=230, Expect=1e-66]} {Mouse: ENSMUSG00000035900, Gramd4, GRAM domain containing 4, [RH, Score=235, Expect=5e-68]} {RNA1509_56811} {RNA1310_5024} {RNA815_10887}
43. MligTC455_24137 21 0.43 Mlig455_032992

Neo: -

Age: -

Region-enriched R4: 5.384/0.03048

 0.966 - - 0.966 - - - Mlig455_032992 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.1]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.8, Expect=3e-17]} {RNA1509_53407, RNA1509_59006} {RNA1310_19264, RNA1509_59006} {RNA1509_59006, RNA815_10011.2}
44. MligTC455_38016 51 1.07 Mlig455_054344

Neo: -

Age: Down-Up-Down

 CFAP53 0.966 - - 0.966 - - - Mlig455_054344 {REF} {Length: 2687} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=77.5]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=172, Expect=9e-47]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=166, Expect=7e-45]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=1e-96]} {RNA1509_1100} {RNA1310_13648, RNA1509_1100} {RNA1509_1100, RNA815_5728}
45. MligTC455_47375 119 2.49 Mlig455_044978

Neo: -

Age: -

 WDR82 0.966 - - 0.966 - - - Mlig455_044978 {REF} {Length: 1214} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=28.9]; WD domain, G-beta repeat [PF00400.34, score=27.0]} {Human: ENSG00000164091, WDR82, WD repeat domain 82, [Score=122, Expect=2e-33]} {Mouse: ENSMUSG00000020257, Wdr82, WD repeat domain containing 82, [Score=122, Expect=1e-33]} {Dmel: FBgn0032030, Wdr82, WD repeat domain 82, [Score=118, Expect=2e-32]} {Celegans: WBGene00016374, swd-2.2, Set1 WD40 repeat protein homolog, [Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_3926_0_2, dd_Smed_v6_3926_0_2, [Score=85.5, Expect=2e-20]} {RNA1509_15991} {RNA1310_21239.1} {RNA815_37495}
46. MligTC455_47376 119 2.49 Mlig455_044991

Neo: -

Age: Up-Down-Up

 WDR82 0.966 - - 0.966 - - - Mlig455_044991 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=78.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=47.3]} {Human: ENSG00000164091, WDR82, WD repeat domain 82, [RH, Score=446, Expect=5e-158]} {Mouse: ENSMUSG00000020257, Wdr82, WD repeat domain containing 82, [RH, Score=446, Expect=3e-158]} {Dmel: FBgn0032030, Wdr82, WD repeat domain 82, [RH, Score=444, Expect=3e-157]} {Celegans: WBGene00016374, swd-2.2, Set1 WD40 repeat protein homolog, [RH, Score=276, Expect=3e-91]} {Smed: dd_Smed_v6_4830_0_1, dd_Smed_v6_4830_0_1, [RH, Score=361, Expect=2e-124]} {RNA1509_15991, RNA1509_54570} {RNA1310_21239.1, RNA1509_15991, RNA1509_54570} {RNA1509_15991, RNA1509_54570, RNA815_12038.1}
47. MligTC455_09527 9 0.19 Mlig455_003833

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_003833 {REF} {Length: 456} {RNA1310_99936} {RNA815_40952}
48. MligTC455_16730 7 0.14 Mlig455_013766

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_013766 {REF} {Length: 2420} {Pfam: Glycine rich protein [PF12810.9, score=35.4]; PAN domain [PF00024.28, score=19.2]} {RNA1310_22079} {RNA815_24304}
49. MligTC455_11168 10 0.21 Mlig455_015184

Neo: -

Age: -

 0.963 - - 0.963 - - - Mlig455_015184 {REF} {Length: 1552} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_60529.2} {RNA815_62333}
50. MligTC455_04675 3 0.07 Mlig455_041371

Neo: -

Age: Up-Down-Down

 0.96 - - 0.960 - - - Mlig455_041371 {REF} {Length: 2057} {RNA1509_29127} {RNA1310_6200} {RNA815_31134}
51. MligTC455_13060 99 2.06 Mlig455_022766

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_022766 {REF} {Length: 787} {NoTransDecoderORF} {RNA1310_132565}
52. MligTC455_27648 19 0.39 Mlig455_044670

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.920

 SZT2 0.96 - - 0.960 - - - Mlig455_044670 {REF} {Length: 12113} {Human: ENSG00000198198, SZT2, SZT2, KICSTOR complex subunit, [Score=82.4, Expect=2e-14]} {Mouse: ENSMUSG00000033253, Szt2, seizure threshold 2, [Score=74.3, Expect=4e-12]} {Smed: dd_Smed_v6_8946_0_1, dd_Smed_v6_8946_0_1, [Score=108, Expect=9e-23]} {RNA1509_25909} {RNA1310_92.1} {RNA815_13061}
53. MligTC455_49402 105 2.18 Mlig455_046565

Neo: -

Age: -

 GLRA2 0.96 - - 0.960 - - - Mlig455_046565 {REF} {Length: 2587} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=137.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=103.6]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=278, Expect=2e-87]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=273, Expect=2e-85]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=269, Expect=1e-83]; ENSG00000109738, GLRB, glycine receptor beta, [Score=266, Expect=4e-82]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=277, Expect=4e-87]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=272, Expect=4e-85]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=268, Expect=4e-83]} {Dmel: FBgn0024963, GluClalpha, [Score=252, Expect=1e-77]} {Celegans: WBGene00000233, avr-15, GluClalpha2B protein, [RH, Score=248, Expect=3e-74]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=297, Expect=3e-95]} {RNA1310_46762} {RNA815_47984}
54. MligTC455_09445 68 1.41 Mlig455_034437

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_034437 {REF} {Length: 1224} {TRANSSPLICED}
55. MligTC455_45606 52 1.07 Mlig455_038149, Mlig455_038255

Neo: -

Age: Up-Down-Up

 0.957 - - 0.957 - - -

Mlig455_038149 {REF} {Length: 3694} {RNA1509_33805} {RNA1310_59853} {RNA815_30522}

Mlig455_038255 {REF} {Length: 3307} {RNA1509_33805} {RNA1310_59853} {RNA815_30522}
56. MligTC455_27779 20 0.42 Mlig455_014793

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.188

 0.954 - - 0.954 - - - Mlig455_014793 {REF} {Length: 2420} {Pfam: Glycine rich protein [PF12810.9, score=19.0]; PAN domain [PF00024.28, score=18.5]} {RNA1509_54307} {RNA1310_20162.1} {RNA815_40957}
57. MligTC455_09986 116 2.42 Mlig455_049841

Neo: -

Age: Up-Up-Down

 0.953 - - 0.953 - - - Mlig455_049841 {REF} {Length: 1272} {RNA1509_29754} {RNA1310_28041.2} {RNA815_15663}
58. MligTC455_13556 124 2.58 Mlig455_064288

Neo: Neoblast

Age: -

 COA7 0.951 - - 0.951 - - - Mlig455_064288 {REF} {Length: 1396} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=23.4]} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [Score=50.1, Expect=7e-07]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [Score=48.1, Expect=3e-06]} {Dmel: FBgn0039965, CG13865, [RH, Score=65.9, Expect=2e-12]} {RNA1509_45906} {RNA1310_37650.1, RNA1509_45906} {RNA1509_45906, RNA815_47606}
59. MligTC455_27066 95 1.99 Mlig455_008802

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_008802 {REF} {Length: 1551} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
60. MligTC455_30271 380 7.91 Mlig455_008670, Mlig455_010745, Mlig455_031996, Mlig455_033120, Mlig455_042255

Neo: -

Age: -

 0.951 - - 0.951 - - -

Mlig455_008670 {REF} {Length: 1094} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_1311.2} {RNA815_19414}

Mlig455_010745 {REF} {Length: 118} {NoTransDecoderORF} {RNA1509_35750} {RNA1310_31492} {RNA815_11267}

Mlig455_031996 {REF} {Length: 313} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_31492} {RNA815_11267}

Mlig455_033120 {REF} {Length: 154} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_31492} {RNA815_11267}

Mlig455_042255 {REF} {Length: 517} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_17473} {RNA815_11267}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA