Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_13912 | 61 | 1.28 | Mlig455_000796 | Neo: - Age: - |
UHRF1BP1L | Mlig455_000796 {REF} {Length: 4519} {Pfam: N-terminal region of Chorein or VPS13 [PF12624.9, score=56.1]} {Human: ENSG00000111647, UHRF1BP1L, UHRF1 binding protein 1 like, [RH, Score=361, Expect=7e-104]} {Mouse: ENSMUSG00000039512, Uhrf1bp1, UHRF1 (ICBP90) binding protein 1, [RH, Score=345, Expect=9e-99]} {Dmel: FBgn0083962, CG34126, [Score=267, Expect=8e-73]} {Celegans: WBGene00008094, C44H4.4, [Score=226, Expect=1e-60]} {Smed: dd_Smed_v6_11401_0_1, dd_Smed_v6_11401_0_1, [RH, Score=410, Expect=2e-123]} {RNA1509_15045, RNA1509_44056} {RNA1310_2283.1, RNA1509_15045, RNA1509_44056} {RNA1509_15045, RNA1509_44056, RNA815_2114.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -3.832 | 1.699 | 0.52464 | 1.00000 | |
RegionR2 | 0.955 | 1.699 | 0.56413 | 0.92591 | |
RegionR3 | 0.3 | 1.699 | 0.76257 | 1.00000 | |
RegionR4 | 0.872 | 1.699 | 0.53849 | 0.86127 | |
RegionR5 | 1.132 | 1.699 | 0.28911 | 0.62011 | |
RegionR6 | 0.679 | 1.699 | 0.56281 | 1.00000 | |
RegionR7 | -0.942 | 1.699 | 0.98897 | 1.00000 | |
RegionR8 | 0.835 | 1.699 | 0.61564 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1.158 | 1.699 | 1.00000 | 1.00000 | |
RegenerationR2 | -1.752 | 1.699 | 0.11556 | 0.52878 | |
RegenerationR3 | -0.839 | 1.699 | 0.49674 | 0.85677 | |
RegenerationR4 | -0.883 | 1.699 | 0.50676 | 0.87303 | |
RegenerationR5 | -1.809 | 1.699 | 0.10248 | 0.48663 | |
RegenerationR6 | -1.473 | 1.699 | 0.27548 | 0.62483 | |
RegenerationBL | -3.201 | 1.699 | 0.25169 | 0.60793 | |
RegenerationTP | -0.057 | 1.699 | 0.96622 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_13912 | 61 | 1.28 | Mlig455_000796 | Neo: - Age: - |
UHRF1BP1L | 5 | 1.000 | 1.000 | 1.000 | 1.000 | - | 1.000 | Mlig455_000796 {REF} {Length: 4519} {Pfam: N-terminal region of Chorein or VPS13 [PF12624.9, score=56.1]} {Human: ENSG00000111647, UHRF1BP1L, UHRF1 binding protein 1 like, [RH, Score=361, Expect=7e-104]} {Mouse: ENSMUSG00000039512, Uhrf1bp1, UHRF1 (ICBP90) binding protein 1, [RH, Score=345, Expect=9e-99]} {Dmel: FBgn0083962, CG34126, [Score=267, Expect=8e-73]} {Celegans: WBGene00008094, C44H4.4, [Score=226, Expect=1e-60]} {Smed: dd_Smed_v6_11401_0_1, dd_Smed_v6_11401_0_1, [RH, Score=410, Expect=2e-123]} {RNA1509_15045, RNA1509_44056} {RNA1310_2283.1, RNA1509_15045, RNA1509_44056} {RNA1509_15045, RNA1509_44056, RNA815_2114.1} |
2. | MligTC455_27437 | 18 | 0.38 | Mlig455_030027 | Neo: - Age: - Region-enriched R2: 9.817/0.00019 Regeneration-downregulated R2: -2.895 Regeneration-depleted R2: -2.895 |
0.997 | - | - | 0.997 | - | - | - | Mlig455_030027 {REF} {Length: 4256} {NoTransDecoderORF} {RNA1509_28802} {RNA1310_36707} {RNA815_52.2} | |
3. | MligTC455_32568 | 159 | 3.3 | Mlig455_004414, Mlig455_037235, Mlig455_037247 | Neo: - Age: Up-Down-Up |
IRAK4, TESK2 | 0.988 | - | - | 0.988 | - | - | - | Mlig455_004414 {REF} {Length: 5411} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_8731.1} Mlig455_037235 {REF} {Length: 3581} {Pfam: Protein kinase domain [PF00069.27, score=93.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]} {Human: ENSG00000070759, TESK2, testis associated actin remodelling kinase 2, [Score=56.2, Expect=1e-07]; ENSG00000285379, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]; ENSG00000129465, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.1, Expect=2e-15]} {Dmel: FBgn0024227, aurB, aurora B, [Score=52.4, Expect=7e-07]} {Celegans: WBGene00017381, svh-4, Discoidin domain-containing receptor tyrosine kinase B, [Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=67.0, Expect=6e-12]} {RNA1509_59099} {RNA1310_32401} {RNA815_8731.3} Mlig455_037247 {REF} {Length: 3340} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_24983} |
4. | MligTC455_37050 | 21 | 0.43 | Mlig455_058277, Mlig455_070789 | Neo: - Age: - |
0.987 | - | - | 0.987 | - | - | - | Mlig455_058277 {REF} {Length: 1417} {RNA1509_52793} {RNA1310_10196} {RNA815_19033} Mlig455_070789 {REF} {Length: 1065} {RNA1509_52793} {RNA1310_10196} {RNA815_19033} |
|
5. | MligTC455_37945 | 128 | 2.66 | Mlig455_050331 | Neo: - Age: Down-Up-Down |
0.987 | - | - | 0.987 | - | - | - | Mlig455_050331 {REF} {Length: 4704} {TRANSSPLICED} {RNA1509_35022, RNA1509_59283} {RNA1310_6390.1, RNA1509_35022, RNA1509_59283} {RNA1509_35022, RNA1509_59283, RNA815_7453} | |
6. | MligTC455_09291 | 59 | 1.22 | Mlig455_057548 | Neo: - Age: - |
0.985 | - | - | 0.985 | - | - | - | Mlig455_057548 {REF} {Length: 1906} {Pfam: Universal stress protein family [PF00582.28, score=98.0]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=119, Expect=2e-34]} {RNA1509_38417} {RNA1310_81147} {RNA815_23823} | |
7. | MligTC455_44946 | 83 | 1.73 | Mlig455_046261, Mlig455_066038 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.905/0.02618 |
POLQ, PRR9 | 0.984 | - | - | - | 0.984 | - | - | Mlig455_046261 {REF} {Length: 9223} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=307.8]; Helicase conserved C-terminal domain [PF00271.33, score=41.2]; DEAD/DEAH box helicase [PF00270.31, score=22.4]} {Human: ENSG00000051341, POLQ, DNA polymerase theta, [RH, Score=610, Expect=5e-178]} {Mouse: ENSMUSG00000034206, Polq, polymerase (DNA directed), theta, [RH, Score=613, Expect=2e-179]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [RH, Score=575, Expect=7e-169]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [RH, Score=308, Expect=3e-84]} {Smed: dd_Smed_v6_51730_0_3, dd_Smed_v6_51730_0_3, [RH, Score=253, Expect=8e-76]} {RNA1509_38802} {RNA1310_1092} {RNA815_20127} Mlig455_066038 {REF} {Length: 1082} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=42.4, Expect=1e-05]} {RNA1310_62396} |
8. | MligTC455_43227 | 81 | 1.7 | Mlig455_040808, Mlig455_040907 | Neo: - Age: - |
0.975 | - | - | 0.975 | - | - | - | Mlig455_040808 {REF} {Length: 3396} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.5]} {RNA1310_94548} {RNA815_41738} Mlig455_040907 {REF} {Length: 3148} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.0]} {RNA1310_56531.1} {RNA815_41738} |
|
9. | MligTC455_28434 | 64 | 1.33 | Mlig455_064695 | Neo: - Age: - |
0.974 | - | - | 0.974 | - | - | - | Mlig455_064695 {REF} {Length: 2772} {TRANSSPLICED} {RNA1509_33160} {RNA1310_6176.2} {RNA815_7664} | |
10. | MligTC455_07324 | 33 | 0.69 | Mlig455_027151 | Neo: - Age: Up-Down-Down |
0.973 | - | - | 0.973 | - | - | - | Mlig455_027151 {REF} {Length: 4978} {RNA1509_58516} {RNA1310_40818} {RNA815_42071} | |
11. | MligTC455_12543 | 28 | 0.59 | Mlig455_022741 | Neo: - Age: - |
0.97 | - | - | 0.970 | - | - | - | Mlig455_022741 {REF} {Length: 665} {NoTransDecoderORF} | |
12. | MligTC455_27888 | 146 | 3.05 | Mlig455_028621, Mlig455_028645 | Neo: - Age: Down-Up-Up Region-enriched R2: 3.461/0.03584 |
0.97 | - | - | 0.970 | - | - | - | Mlig455_028621 {REF} {Length: 1647} {Pfam: AP-5 complex subunit sigma-1 [PF15001.8, score=40.8]} {RNA1509_48400} {RNA1310_26125} {RNA815_7192} Mlig455_028645 {REF} {Length: 1841} {TRANSSPLICED} {Pfam: AP-5 complex subunit sigma-1 [PF15001.8, score=43.8]} {RNA1509_48400} {RNA1310_26125, RNA1509_48400} {RNA1509_48400, RNA815_7192} |
|
13. | MligTC455_50439 | 22 | 0.46 | Mlig455_046910 | Neo: - Age: - |
0.967 | - | - | 0.967 | - | - | - | Mlig455_046910 {REF} {Length: 564} {Pfam: Putative zinc-RING and/or ribbon [PF13901.8, score=23.6]} {RNA1310_27229} {RNA815_30609} | |
14. | MligTC455_35674 | 211 | 4.4 | Mlig455_024962 | Neo: - Age: - Region-enriched R7: 4.259/0.00000 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_024962 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_50780} {RNA1310_35965, RNA1509_50780} {RNA1509_50780, RNA815_32626.1} | |
15. | MligTC455_11964 | 18 | 0.38 | Mlig455_063846 | Neo: - Age: Up-Down-Up |
0.959 | - | - | - | 0.959 | - | - | Mlig455_063846 {REF} {Length: 2728} {RNA1310_40220} {RNA815_27849} | |
16. | MligTC455_28741 | 27 | 0.57 | Mlig455_052173 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_052173 {REF} {Length: 306} {NoTransDecoderORF} {RNA1509_57509} {RNA1310_50168} {RNA815_15806} | |
17. | MligTC455_49726 | 80 | 1.66 | Mlig455_042820 | Neo: - Age: - |
0.959 | - | - | - | 0.959 | - | - | Mlig455_042820 {REF} {Length: 1788} {TRANSSPLICED} {RNA1509_57632} {RNA1310_6900} {RNA815_8335} | |
18. | MligTC455_00320 | 21 | 0.44 | Mlig455_036225 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_036225 {REF} {Length: 791} {RNA1509_49336} {RNA1310_7117.1} {RNA815_18615} | |
19. | MligTC455_16060 | 22 | 0.47 | Mlig455_044243 | Neo: - Age: Down-Up-Down |
CFAP157 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_044243 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: Siphovirus Gp157 [PF05565.13, score=20.7]; Protein of unknown function, DUF573 [PF04504.16, score=20.6]} {Human: ENSG00000160401, CFAP157, cilia and flagella associated protein 157, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000038987, Cfap157, cilia and flagella associated protein 157, [Score=110, Expect=3e-25]} {Dmel: FBgn0036962, CG17122, [Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_11523_0_1, dd_Smed_v6_11523_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_42697} {RNA1310_10711, RNA1509_42697} {RNA1509_42697, RNA815_24261} |
20. | MligTC455_26294 | 129 | 2.68 | Mlig455_016733 | Neo: - Age: - |
DCLRE1A | 0.958 | - | - | - | - | - | 0.958 | Mlig455_016733 {REF} {Length: 6196} {Pfam: DNA repair metallo-beta-lactamase [PF07522.16, score=68.4]} {Human: ENSG00000198924, DCLRE1A, DNA cross-link repair 1A, [Score=75.5, Expect=6e-16]} {Mouse: ENSMUSG00000025077, Dclre1a, DNA cross-link repair 1A, [Score=72.4, Expect=5e-15]} {Dmel: FBgn0037338, Snm1, [Score=55.1, Expect=3e-09]} {RNA1509_45118} {RNA1310_16949.2} {RNA815_5685.1} |
21. | MligTC455_34503 | 27 | 0.57 | Mlig455_024885 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_024885 {REF} {Length: 1211} {RNA1310_48713} {RNA815_64021} | |
22. | MligTC455_30721 | 94 | 1.96 | Mlig455_047945 | Neo: - Age: - |
SCP2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_047945 {REF} {Length: 2552} {TRANSSPLICED} {Pfam: Thiolase, C-terminal domain [PF02803.20, score=29.8]; Thiolase, N-terminal domain [PF00108.25, score=26.7]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [Score=251, Expect=3e-77]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [Score=259, Expect=1e-80]} {Dmel: FBgn0032715, CG17597, [Score=279, Expect=8e-90]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [Score=222, Expect=6e-68]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [Score=263, Expect=9e-84]} {RNA1509_28112} {RNA1310_20701.2, RNA1509_28112} {RNA1509_28112, RNA815_12561} |
23. | MligTC455_31958 | 100 | 2.09 | Mlig455_023378, Mlig455_031273, Mlig455_064223 | Neo: - Age: - |
PRR9 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_023378 {REF} {Length: 464} {RNA1509_25788} {RNA1310_79001} {RNA815_34044} Mlig455_031273 {REF} {Length: 542} {Pfam: Helix-turn-helix domain [PF12728.9, score=20.0]; Helix-turn-helix domain [PF13518.8, score=19.9]} {RNA1310_30102} {RNA815_29063} Mlig455_064223 {REF} {Length: 824} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.3, Expect=2e-06]} {RNA1310_79001} {RNA815_34044} |
24. | MligTC455_12982 | 36 | 0.75 | Mlig455_006422 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_006422 {REF} {Length: 2640} {RNA1509_54360} {RNA1310_27673} {RNA815_16736} | |
25. | MligTC455_21739 | 164 | 3.41 | Mlig455_007931 | Neo: - Age: - Region-enriched R2: 2.596/0.04280 |
CCDC150 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_007931 {REF} {Length: 3798} {TRANSSPLICED} {Human: ENSG00000144395, CCDC150, coiled-coil domain containing 150, [RH, Score=82.0, Expect=3e-15]} {Mouse: ENSMUSG00000025983, Ccdc150, coiled-coil domain containing 150, [RH, Score=75.5, Expect=3e-13]} {RNA1509_19254} {RNA1310_9574} {RNA815_22339} |
26. | MligTC455_31119 | 17 | 0.36 | Mlig455_041124 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_041124 {REF} {Length: 4159} {TRANSSPLICED} {RNA1310_20292} {RNA815_18212} | |
27. | MligTC455_39383 | 57 | 1.18 | Mlig455_018466 | Neo: - Age: - |
ZFP62 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_018466 {REF} {Length: 5302} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=101.9]; C2H2-type zinc finger [PF13894.8, score=91.9]; C2H2-type zinc finger [PF13912.8, score=44.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=34.4]; Zinc-finger of C2H2 type [PF12874.9, score=31.7]} {Human: ENSG00000196670, ZFP62, ZFP62 zinc finger protein, [Score=92.4, Expect=4e-18]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=90.5, Expect=8e-18]; ENSG00000256771, ZNF253, zinc finger protein 253, [Score=87.8, Expect=2e-17]} {Mouse: ENSMUSG00000030443, Zfp583, zinc finger protein 583, [Score=89.4, Expect=1e-17]; ENSMUSG00000057101, Zfp180, zinc finger protein 180, [Score=88.2, Expect=4e-17]; ENSMUSG00000046311, Zfp62, zinc finger protein 62, [Score=87.8, Expect=7e-17]; ENSMUSG00000095362, Gm14325, predicted gene 14325, [Score=87.8, Expect=3e-17]; ENSMUSG00000037001, Zfp39, zinc finger protein 39, [Score=85.1, Expect=3e-16]} {Dmel: FBgn0020309, crol, crooked legs, [Score=80.5, Expect=8e-15]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=73.6, Expect=7e-13]} {RNA1509_43194} {RNA1310_1292} {RNA815_2738.1} |