TomoSeq data search

Data search

Results for MligTC455_32568

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32568	159	3.30	Mlig455_004414, Mlig455_037235, Mlig455_037247	Neo: - Age: Up-Down-Up	IRAK4, TESK2	Mlig455_004414 {REF} {Length: 5411} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_8731.1} Mlig455_037235 {REF} {Length: 3581} {Pfam: Protein kinase domain [PF00069.27, score=93.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]} {Human: ENSG00000070759, TESK2, testis associated actin remodelling kinase 2, [Score=56.2, Expect=1e-07]; ENSG00000285379, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]; ENSG00000129465, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.1, Expect=2e-15]} {Dmel: FBgn0024227, aurB, aurora B, [Score=52.4, Expect=7e-07]} {Celegans: WBGene00017381, svh-4, Discoidin domain-containing receptor tyrosine kinase B, [Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=67.0, Expect=6e-12]} {RNA1509_59099} {RNA1310_32401} {RNA815_8731.3} Mlig455_037247 {REF} {Length: 3340} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_24983}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_32568

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.452	2.434	0.10309	0.67621
RegionR2	0.535	2.434	0.57442	0.93245
RegionR3	0.215	2.434	0.76134	1.00000
RegionR4	1.091	2.434	0.26631	0.57094
RegionR5	-0.658	2.434	0.48528	0.84905
RegionR6	-3.11	2.434	0.02376	0.28032
RegionR7	0.184	2.434	0.85668	1.00000
RegionR8	-1.708	2.434	0.44606	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.622	2.434	0.10893	0.83178
RegenerationR2	0.288	2.434	0.68811	0.95201
RegenerationR3	-0.75	2.434	0.38723	0.79412
RegenerationR4	0.173	2.434	0.86464	1.00000
RegenerationR5	1.531	2.434	0.07441	0.42672
RegenerationR6	3.134	2.434	0.00898	0.11648
RegenerationBL	2.073	2.434	0.08574	0.34315
RegenerationTP	1.372	2.434	0.35517	0.79629

Genes with expression patterns similar to MligTC455_32568

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32568	159	3.3	Mlig455_004414, Mlig455_037235, Mlig455_037247	Neo: - Age: Up-Down-Up	IRAK4, TESK2	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_004414 {REF} {Length: 5411} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_8731.1} Mlig455_037235 {REF} {Length: 3581} {Pfam: Protein kinase domain [PF00069.27, score=93.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]} {Human: ENSG00000070759, TESK2, testis associated actin remodelling kinase 2, [Score=56.2, Expect=1e-07]; ENSG00000285379, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]; ENSG00000129465, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.1, Expect=2e-15]} {Dmel: FBgn0024227, aurB, aurora B, [Score=52.4, Expect=7e-07]} {Celegans: WBGene00017381, svh-4, Discoidin domain-containing receptor tyrosine kinase B, [Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=67.0, Expect=6e-12]} {RNA1509_59099} {RNA1310_32401} {RNA815_8731.3} Mlig455_037247 {REF} {Length: 3340} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_24983}
2.	MligTC455_12543	28	0.59	Mlig455_022741	Neo: - Age: -		1.732	-	-	0.956	-	-	0.776	Mlig455_022741 {REF} {Length: 665} {NoTransDecoderORF}
3.	MligTC455_01405	72	1.51	Mlig455_040777	Neo: - Age: -		1.705	-	-	0.961	-	0.744	-	Mlig455_040777 {REF} {Length: 274} {NoTransDecoderORF} {RNA1509_34939} {RNA1310_613.1} {RNA815_5431}
4.	MligTC455_13912	61	1.28	Mlig455_000796	Neo: - Age: -	UHRF1BP1L	0.988	-	-	0.988	-	-	-	Mlig455_000796 {REF} {Length: 4519} {Pfam: N-terminal region of Chorein or VPS13 [PF12624.9, score=56.1]} {Human: ENSG00000111647, UHRF1BP1L, UHRF1 binding protein 1 like, [RH, Score=361, Expect=7e-104]} {Mouse: ENSMUSG00000039512, Uhrf1bp1, UHRF1 (ICBP90) binding protein 1, [RH, Score=345, Expect=9e-99]} {Dmel: FBgn0083962, CG34126, [Score=267, Expect=8e-73]} {Celegans: WBGene00008094, C44H4.4, [Score=226, Expect=1e-60]} {Smed: dd_Smed_v6_11401_0_1, dd_Smed_v6_11401_0_1, [RH, Score=410, Expect=2e-123]} {RNA1509_15045, RNA1509_44056} {RNA1310_2283.1, RNA1509_15045, RNA1509_44056} {RNA1509_15045, RNA1509_44056, RNA815_2114.1}
5.	MligTC455_27437	18	0.38	Mlig455_030027	Neo: - Age: - Region-enriched R2: 9.817/0.00019 Region-enriched R3: 6.196/0.00409 Regeneration-downregulated R2: -2.895 Regeneration-depleted R2: -2.895		0.988	-	-	0.988	-	-	-	Mlig455_030027 {REF} {Length: 4256} {NoTransDecoderORF} {RNA1509_28802} {RNA1310_36707} {RNA815_52.2}
6.	MligTC455_37945	128	2.66	Mlig455_050331	Neo: - Age: Down-Up-Down		0.984	-	-	0.984	-	-	-	Mlig455_050331 {REF} {Length: 4704} {TRANSSPLICED} {RNA1509_35022, RNA1509_59283} {RNA1310_6390.1, RNA1509_35022, RNA1509_59283} {RNA1509_35022, RNA1509_59283, RNA815_7453}
7.	MligTC455_28741	27	0.57	Mlig455_052173	Neo: - Age: -		0.98	-	-	0.980	-	-	-	Mlig455_052173 {REF} {Length: 306} {NoTransDecoderORF} {RNA1509_57509} {RNA1310_50168} {RNA815_15806}
8.	MligTC455_37050	21	0.43	Mlig455_058277, Mlig455_070789	Neo: - Age: -		0.976	-	-	0.976	-	-	-	Mlig455_058277 {REF} {Length: 1417} {RNA1509_52793} {RNA1310_10196} {RNA815_19033} Mlig455_070789 {REF} {Length: 1065} {RNA1509_52793} {RNA1310_10196} {RNA815_19033}
9.	MligTC455_09291	59	1.22	Mlig455_057548	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_057548 {REF} {Length: 1906} {Pfam: Universal stress protein family [PF00582.28, score=98.0]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=119, Expect=2e-34]} {RNA1509_38417} {RNA1310_81147} {RNA815_23823}
10.	MligTC455_43227	81	1.7	Mlig455_040808, Mlig455_040907	Neo: - Age: -		0.973	-	-	0.973	-	-	-	Mlig455_040808 {REF} {Length: 3396} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.5]} {RNA1310_94548} {RNA815_41738} Mlig455_040907 {REF} {Length: 3148} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.0]} {RNA1310_56531.1} {RNA815_41738}
11.	MligTC455_27888	146	3.05	Mlig455_028621, Mlig455_028645	Neo: - Age: Down-Up-Up Region-enriched R2: 3.461/0.03584		0.97	-	-	0.970	-	-	-	Mlig455_028621 {REF} {Length: 1647} {Pfam: AP-5 complex subunit sigma-1 [PF15001.8, score=40.8]} {RNA1509_48400} {RNA1310_26125} {RNA815_7192} Mlig455_028645 {REF} {Length: 1841} {TRANSSPLICED} {Pfam: AP-5 complex subunit sigma-1 [PF15001.8, score=43.8]} {RNA1509_48400} {RNA1310_26125, RNA1509_48400} {RNA1509_48400, RNA815_7192}
12.	MligTC455_21739	164	3.41	Mlig455_007931	Neo: - Age: - Region-enriched R2: 2.596/0.04280	CCDC150	0.968	-	-	0.968	-	-	-	Mlig455_007931 {REF} {Length: 3798} {TRANSSPLICED} {Human: ENSG00000144395, CCDC150, coiled-coil domain containing 150, [RH, Score=82.0, Expect=3e-15]} {Mouse: ENSMUSG00000025983, Ccdc150, coiled-coil domain containing 150, [RH, Score=75.5, Expect=3e-13]} {RNA1509_19254} {RNA1310_9574} {RNA815_22339}
13.	MligTC455_28434	64	1.33	Mlig455_064695	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_064695 {REF} {Length: 2772} {TRANSSPLICED} {RNA1509_33160} {RNA1310_6176.2} {RNA815_7664}
14.	MligTC455_19470	80	1.66	Mlig455_002707	Neo: - Age: -		0.963	-	-	0.963	-	-	-	Mlig455_002707 {REF} {Length: 260} {NoTransDecoderORF} {RNA1509_46200} {RNA1310_613.1} {RNA815_5431}
15.	MligTC455_50439	22	0.46	Mlig455_046910	Neo: - Age: -		0.963	-	-	0.963	-	-	-	Mlig455_046910 {REF} {Length: 564} {Pfam: Putative zinc-RING and/or ribbon [PF13901.8, score=23.6]} {RNA1310_27229} {RNA815_30609}
16.	MligTC455_14279	113	2.36	Mlig455_014541	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_014541 {REF} {Length: 650} {NoTransDecoderORF} {RNA1509_16321} {RNA1310_37407} {RNA815_34815}
17.	MligTC455_19937	67	1.4	Mlig455_048004	Neo: - Age: Down-Up-Down Region-enriched R4: 5.334/0.01237	NKX2-2	0.961	-	-	0.961	-	-	-	Mlig455_048004 {REF} {Length: 2666} {Pfam: Homeodomain [PF00046.31, score=72.6]} {Human: ENSG00000125820, NKX2-2, NK2 homeobox 2, [Score=119, Expect=2e-31]} {Mouse: ENSMUSG00000027434, Nkx2-2, NK2 homeobox 2, [Score=119, Expect=1e-31]} {Dmel: FBgn0261930, vnd, ventral nervous system defective, [Score=112, Expect=1e-27]} {Celegans: WBGene00000447, ceh-24, Homeobox protein ceh-24, [Score=95.5, Expect=9e-23]} {Smed: dd_Smed_v6_2716_0_3, dd_Smed_v6_2716_0_3, [Score=118, Expect=4e-30]} {RNA1509_27298} {RNA1310_16689.1} {RNA815_30453}
18.	MligTC455_34503	27	0.57	Mlig455_024885	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_024885 {REF} {Length: 1211} {RNA1310_48713} {RNA815_64021}
19.	MligTC455_53361	98	2.05	Mlig455_042366	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=0.875		0.961	-	-	0.961	-	-	-	Mlig455_042366 {REF} {Length: 1614} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=27.3]; Acetyl-coA carboxylase zinc finger domain [PF17848.3, score=22.3]} {RNA1509_35522} {RNA1310_6611} {RNA815_4725}
20.	MligTC455_25710	16	0.33	Mlig455_067581	Neo: - Age: Down-Up-Down	CSTB	0.958	-	-	0.958	-	-	-	Mlig455_067581 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: Cystatin domain [PF00031.23, score=22.0]} {Human: ENSG00000160213, CSTB, cystatin B, [Score=62.8, Expect=4e-14]} {Mouse: ENSMUSG00000005054, Cstb, cystatin B, [Score=55.8, Expect=1e-11]} {Smed: dd_Smed_v6_423_0_1, dd_Smed_v6_423_0_1, [Score=69.7, Expect=5e-17]} {RNA1509_48375} {RNA1310_25872} {RNA815_28693}
21.	MligTC455_51795	223	4.65	Mlig455_025595, Mlig455_052898	Neo: - Age: Down-Down-Up		0.955	-	-	0.955	-	-	-	Mlig455_025595 {REF} {Length: 924} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211} Mlig455_052898 {REF} {Length: 984} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}
22.	MligTC455_25223	281	5.85	Mlig455_053623	Neo: - Age: -	ESF1	0.954	-	-	0.954	-	-	-	Mlig455_053623 {REF} {Length: 2309} {TRANSSPLICED} {Pfam: NUC153 domain [PF08159.14, score=41.6]; CDC45-like protein [PF02724.16, score=22.8]; Nop14-like family [PF04147.14, score=20.9]; SDA1 [PF05285.14, score=20.3]} {Human: ENSG00000089048, ESF1, ESF1 nucleolar pre-rRNA processing protein homolog, [RH, Score=142, Expect=9e-35]} {Mouse: ENSMUSG00000045624, Esf1, ESF1 nucleolar pre-rRNA processing protein homolog, [RH, Score=144, Expect=1e-35]} {Dmel: FBgn0024364, CG11417, [Score=184, Expect=2e-49]} {Smed: dd_Smed_v6_12089_0_1, dd_Smed_v6_12089_0_1, [Score=75.1, Expect=3e-14]} {RNA1509_37466, RNA1509_48220, RNA1509_54928} {RNA1310_10403, RNA1509_37466, RNA1509_48220, RNA1509_54928} {RNA1509_37466, RNA1509_48220, RNA1509_54928, RNA815_3468}
23.	MligTC455_32382	248	5.17	Mlig455_051226	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.907		0.953	-	-	-	-	-	0.953	Mlig455_051226 {REF} {Length: 6909} {RNA1509_7608} {RNA1310_3625} {RNA815_395.1}
24.	MligTC455_43424	123	2.57	Mlig455_045098	Neo: - Age: logFC(26M/2M)=0.367	RHAG	0.953	-	-	0.953	-	-	-	Mlig455_045098 {REF} {Length: 2259} {Pfam: Ammonium Transporter Family [PF00909.23, score=235.5]} {Human: ENSG00000112077, RHAG, Rh associated glycoprotein, [RH, Score=371, Expect=1e-124]; ENSG00000140519, RHCG, Rh family C glycoprotein, [RH, Score=368, Expect=2e-122]} {Mouse: ENSMUSG00000023926, Rhag, Rhesus blood group-associated A glycoprotein, [RH, Score=343, Expect=5e-114]} {Dmel: FBgn0028699, Rh50, [Score=370, Expect=6e-124]} {Celegans: WBGene00004358, rhr-1, RH (Rhesus) antigen Related, [RH, Score=349, Expect=9e-116]} {Smed: dd_Smed_v6_1882_0_2, dd_Smed_v6_1882_0_2, [RH, Score=397, Expect=1e-134]} {RNA1509_25383} {RNA1310_3647} {RNA815_6696}