TomoSeq data search

Data search

Results for MligTC455_14401

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_14401	7	0.15	Mlig455_012600	Neo: - Age: -		Mlig455_012600 {REF} {Length: 628} {NoTransDecoderORF}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_14401

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_14401

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14401	7	0.15	Mlig455_012600	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_012600 {REF} {Length: 628} {NoTransDecoderORF}
2.	MligTC455_08679	21	0.44	Mlig455_013256	Neo: - Age: -		0.991	-	-	-	-	-	0.991	Mlig455_013256 {REF} {Length: 356} {NoTransDecoderORF} {RNA1310_123613} {RNA815_61270}
3.	MligTC455_41224	14	0.28	Mlig455_045227	Neo: Int S/G2/M Age: -		0.983	-	-	-	-	0.983	-	Mlig455_045227 {REF} {Length: 697} {RNA1310_99359}
4.	MligTC455_26302	103	2.15	Mlig455_042038	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_042038 {REF} {Length: 2829} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=175.4]; Tetratricopeptide repeat [PF13424.8, score=29.5]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=130, Expect=2e-35]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=113, Expect=6e-29]} {RNA1509_29458} {RNA1310_28569} {RNA815_7911}
5.	MligTC455_13120	12	0.24	Mlig455_052885	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_052885 {REF} {Length: 995}
6.	MligTC455_00801	10	0.2	Mlig455_032874	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_032874 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_26475}
7.	MligTC455_09940	3	0.06	Mlig455_067083	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_067083 {REF} {Length: 158} {NoTransDecoderORF}
8.	MligTC455_24931	5	0.1	Mlig455_041049	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.382		0.974	-	-	-	-	0.974	-	Mlig455_041049 {REF} {Length: 2557} {NoTransDecoderORF} {RNA1509_32517} {RNA1310_34830.1} {RNA815_18494}
9.	MligTC455_09624	5	0.1	Mlig455_019644	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_019644 {REF} {Length: 779} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_18639} {RNA1310_42584} {RNA815_16712}
10.	MligTC455_26427	15	0.31	Mlig455_054140	Neo: - Age: logFC(26M/2M)=-1.151	TRPM1	0.971	-	-	-	-	0.971	-	Mlig455_054140 {REF} {Length: 5171} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=79.8]; Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=40.4]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=38.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=57.8, Expect=1e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=56.6, Expect=3e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=57.0, Expect=1e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.2, Expect=6e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=3e-19]} {RNA1509_29189} {RNA1310_1181, RNA1509_29189} {RNA1509_29189, RNA815_1111.1}
11.	MligTC455_46464	37	0.77	Mlig455_015896	Neo: - Age: - Region-enriched R5: 3.599/0.02898	ADAT2	0.968	-	-	-	-	0.968	-	Mlig455_015896 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=68.1]; MafB19-like deaminase [PF14437.8, score=54.4]} {Human: ENSG00000189007, ADAT2, adenosine deaminase, tRNA specific 2, [RH, Score=144, Expect=3e-43]} {Mouse: ENSMUSG00000019808, Adat2, adenosine deaminase, tRNA-specific 2, [RH, Score=142, Expect=1e-42]} {Dmel: FBgn0038491, CG5292, [RH, Score=106, Expect=2e-29]} {Celegans: WBGene00010436, JC8.4, [RH, Score=131, Expect=5e-39]} {Smed: dd_Smed_v6_7968_0_1, dd_Smed_v6_7968_0_1, [RH, Score=102, Expect=9e-28]} {RNA1509_26097} {RNA1310_6653, RNA1509_26097} {RNA1509_26097, RNA815_12714}
12.	MligTC455_09500	21	0.45	Mlig455_026734	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_026734 {REF} {Length: 2668} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=142.4]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=246, Expect=6e-73]} {RNA1509_19376} {RNA1310_47426} {RNA815_43225}
13.	MligTC455_46589	83	1.72	Mlig455_042396	Neo: - Age: -	ANKRD50	0.966	-	-	-	-	0.966	-	Mlig455_042396 {REF} {Length: 4787} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=182.5]; Ankyrin repeats (many copies) [PF13637.8, score=113.6]; Ankyrin repeats (many copies) [PF13857.8, score=103.5]; Ankyrin repeat [PF13606.8, score=101.0]; Ankyrin repeat [PF00023.32, score=87.5]; Mab-21 protein [PF03281.16, score=30.5]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=165, Expect=7e-41]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=164, Expect=8e-41]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=156, Expect=3e-38]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=145, Expect=6e-35]} {Smed: dd_Smed_v6_2072_0_12, dd_Smed_v6_2072_0_12, [Score=148, Expect=5e-36]} {RNA1509_42401} {RNA1310_4658.1} {RNA815_6429.1}
14.	MligTC455_39621	17	0.36	Mlig455_061228	Neo: Irradiation Age: -	NRDE2	0.964	-	-	-	-	0.964	-	Mlig455_061228 {REF} {Length: 5166} {TRANSSPLICED} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=139.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.1]; RING-type zinc-finger [PF13445.8, score=34.1]; Ring finger domain [PF13639.8, score=34.1]; Prokaryotic RING finger family 4 [PF14447.8, score=24.6]; zinc-RING finger domain [PF14634.8, score=23.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.3]; RING-H2 zinc finger domain [PF12678.9, score=20.8]; U-box domain [PF04564.17, score=19.3]; zinc RING finger of MSL2 [PF16685.7, score=18.9]} {Human: ENSG00000119720, NRDE2, NRDE-2, necessary for RNA interference, domain containing, [RH, Score=134, Expect=1e-30]} {Mouse: ENSMUSG00000021179, Nrde2, nrde-2 necessary for RNA interference, domain containing, [RH, Score=124, Expect=8e-28]} {Dmel: FBgn0265356, tn, thin, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_12142_0_1, dd_Smed_v6_12142_0_1, [RH, Score=102, Expect=2e-21]} {RNA1509_20291, RNA1509_37760} {RNA1310_3668.1, RNA1509_20291, RNA1509_37760} {RNA1509_20291, RNA1509_37760, RNA815_2487.1}
15.	MligTC455_15702	47	0.97	Mlig455_019200	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_019200 {REF} {Length: 4665} {RNA1509_57405} {RNA1310_50410}
16.	MligTC455_15865	6	0.12	Mlig455_004735	Neo: - Age: -	TRPC5	0.963	-	-	-	-	0.963	-	Mlig455_004735 {REF} {Length: 2679} {Pfam: Transient receptor ion channel II [PF08344.13, score=102.7]; Ion transport protein [PF00520.33, score=91.0]; Polycystin cation channel [PF08016.14, score=32.2]; Ankyrin repeats (3 copies) [PF12796.9, score=31.0]; Ankyrin repeat [PF13606.8, score=29.9]; Ankyrin repeats (many copies) [PF13637.8, score=25.5]; Ankyrin repeat [PF00023.32, score=19.5]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=621, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=620, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=589, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=569, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=754, Expect=0.0]} {Smed: dd_Smed_v6_20491_0_1, dd_Smed_v6_20491_0_1, [Score=522, Expect=2e-171]} {RNA1310_103000} {RNA815_44973}
17.	MligTC455_01406	9	0.19	Mlig455_057537	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_057537 {REF} {Length: 1079} {NoTransDecoderORF} {RNA1509_48098} {RNA1310_73932} {RNA815_6533.1}
18.	MligTC455_20891	5	0.11	Mlig455_027273	Neo: - Age: -	WASHC4	0.96	-	-	-	-	0.960	-	Mlig455_027273 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: WASH complex subunit 7, N-terminal [PF14745.8, score=495.6]; WASH complex subunit 7 [PF14744.8, score=491.9]; WASH complex subunit 7, C-terminal [PF14746.8, score=219.7]} {Human: ENSG00000136051, WASHC4, WASH complex subunit 4, [RH, Score=1100, Expect=0.0]} {Mouse: ENSMUSG00000034560, Washc4, WASH complex subunit 4, [RH, Score=1074, Expect=0.0]} {Dmel: FBgn0030739, SWIP, Strumpellin and WASH-interacting protein, [RH, Score=395, Expect=7e-119]} {Celegans: WBGene00013167, Y53F4B.21, [RH, Score=183, Expect=1e-46]} {Smed: dd_Smed_v6_4183_0_1, dd_Smed_v6_4183_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_4414} {RNA1310_2621, RNA1509_4414} {RNA1509_4414, RNA815_772}
19.	MligTC455_14908	12	0.25	Mlig455_036162	Neo: - Age: Down-Up-Down		0.954	-	-	-	-	0.954	-	Mlig455_036162 {REF} {Length: 959} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=202.4]; Sulfotransferase family [PF13469.8, score=22.4]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [RH, Score=181, Expect=3e-56]} {RNA1509_33205} {RNA1310_40261.1} {RNA815_9285.1}
20.	MligTC455_11683	4	0.09	Mlig455_032272	Neo: Germline Age: -		0.953	-	-	-	-	0.953	-	Mlig455_032272 {REF} {Length: 1708} {Pfam: Zinc knuckle [PF00098.25, score=20.1]} {RNA1310_66460} {RNA815_51995}
21.	MligTC455_11316	16	0.32	Mlig455_015383	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_015383 {REF} {Length: 775} {TRANSSPLICED} {RNA1509_14043} {RNA1310_81640} {RNA815_13324.1}
22.	MligTC455_56702	4	0.09	Mlig455_026927	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_026927 {REF} {Length: 1990} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.7]} {Smed: dd_Smed_v6_20444_0_1, dd_Smed_v6_20444_0_1, [Score=78.2, Expect=9e-16]}
23.	MligTC455_30070	8	0.16	Mlig455_004769	Neo: - Age: Up-Down-Down	TOP3A	0.951	-	-	-	-	0.951	-	Mlig455_004769 {REF} {Length: 4024} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=343.5]; Toprim domain [PF01751.24, score=66.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=704, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [Score=671, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [Score=580, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [Score=526, Expect=2e-178]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623}
24.	MligTC455_41474	104	2.16	Mlig455_014812	Neo: - Age: -	DNAJC27	0.951	-	-	-	-	0.951	-	Mlig455_014812 {REF} {Length: 5391} {Pfam: Ras family [PF00071.24, score=116.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=58.4]; ADP-ribosylation factor family [PF00025.23, score=41.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=20.3]} {Human: ENSG00000115137, DNAJC27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000020657, Dnajc27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=3e-29]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=108, Expect=4e-29]} {Dmel: FBgn0029959, Rab39, [Score=98.2, Expect=3e-25]} {Celegans: WBGene00004279, rab-21, RAB family, [Score=93.6, Expect=1e-23]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=112, Expect=5e-31]} {RNA1509_34577} {RNA1310_27449.1, RNA1509_34577} {RNA1509_34577, RNA815_21008}
25.	MligTC455_13867	2	0.04	Mlig455_018515	Neo: - Age: -	GRIN3B	0.95	-	-	-	-	0.950	-	Mlig455_018515 {REF} {Length: 1240} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.1]} {Human: ENSG00000116032, GRIN3B, glutamate ionotropic receptor NMDA type subunit 3B, [Score=57.8, Expect=1e-10]} {Mouse: ENSMUSG00000002771, Grin2d, glutamate receptor, ionotropic, NMDA2D (epsilon 4), [Score=51.2, Expect=2e-08]; ENSMUSG00000039579, Grin3a, glutamate receptor ionotropic, NMDA3A, [Score=51.2, Expect=2e-08]; ENSMUSG00000035745, Grin3b, glutamate receptor, ionotropic, NMDA3B, [Score=50.4, Expect=3e-08]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=45.1, Expect=2e-06]} {Celegans: WBGene00003775, nmr-2, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-2, [Score=43.5, Expect=5e-06]} {Smed: dd_Smed_v6_8187_0_2, dd_Smed_v6_8187_0_2, [Score=57.4, Expect=5e-11]} {RNA1509_56685} {RNA1310_16080} {RNA815_17919}
26.	MligTC455_15365	15	0.3	Mlig455_060332	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_060332 {REF} {Length: 978} {RNA1310_84789}