Data search
Results for MligTC455_30070
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30070 | 8 | 0.16 | Mlig455_004769 | Neo: - Age: Up-Down-Down |
TOP3A | Mlig455_004769 {REF} {Length: 4024} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=343.5]; Toprim domain [PF01751.24, score=66.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=704, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [Score=671, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [Score=580, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [Score=526, Expect=2e-178]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623} |
Cumulative graph for MligTC455_30070
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_30070
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30070 | 8 | 0.16 | Mlig455_004769 | Neo: - Age: Up-Down-Down |
TOP3A | 1 | - | - | - | - | 1.000 | - | Mlig455_004769 {REF} {Length: 4024} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=343.5]; Toprim domain [PF01751.24, score=66.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=704, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [Score=671, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [Score=580, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [Score=526, Expect=2e-178]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623} |
| 2. | MligTC455_16435 | 33 | 0.69 | Mlig455_070040 | Neo: Int S/G2/M Age: - |
0.973 | - | - | - | - | 0.973 | - | Mlig455_070040 {REF} {Length: 1149} {RNA1310_54637} {RNA815_34864} | |
| 3. | MligTC455_15865 | 6 | 0.12 | Mlig455_004735 | Neo: - Age: - |
TRPC5 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_004735 {REF} {Length: 2679} {Pfam: Transient receptor ion channel II [PF08344.13, score=102.7]; Ion transport protein [PF00520.33, score=91.0]; Polycystin cation channel [PF08016.14, score=32.2]; Ankyrin repeats (3 copies) [PF12796.9, score=31.0]; Ankyrin repeat [PF13606.8, score=29.9]; Ankyrin repeats (many copies) [PF13637.8, score=25.5]; Ankyrin repeat [PF00023.32, score=19.5]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=621, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=620, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=589, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=569, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=754, Expect=0.0]} {Smed: dd_Smed_v6_20491_0_1, dd_Smed_v6_20491_0_1, [Score=522, Expect=2e-171]} {RNA1310_103000} {RNA815_44973} |
| 4. | MligTC455_03435 | 34 | 0.71 | Mlig455_068694, Mlig455_068720 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_068694 {REF} {Length: 508} {NoTransDecoderORF} {RNA1509_46565} {RNA1310_64787} {RNA815_53933} Mlig455_068720 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_22119} {RNA1310_64787} {RNA815_53933} |
|
| 5. | MligTC455_16274 | 6 | 0.13 | Mlig455_029336 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_029336 {REF} {Length: 607} {Pfam: Domain of unknown function (DUF3898) [PF13037.8, score=19.0]} | |
| 6. | MligTC455_30922 | 41 | 0.85 | Mlig455_026594 | Neo: - Age: Up-Down-Down |
PACS2 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_026594 {REF} {Length: 6432} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=213.5]; Amiloride-sensitive sodium channel [PF00858.26, score=180.1]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [RH, Score=146, Expect=1e-34]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [RH, Score=140, Expect=3e-33]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [RH, Score=133, Expect=7e-31]} {Celegans: WBGene00044077, tag-232, [RH, Score=78.6, Expect=2e-14]} {Smed: dd_Smed_v6_23028_0_1, dd_Smed_v6_23028_0_1, [Score=263, Expect=3e-75]} {RNA1509_39289} {RNA1310_8986.2} {RNA815_4629.1} |
| 7. | MligTC455_11683 | 4 | 0.09 | Mlig455_032272 | Neo: Germline Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_032272 {REF} {Length: 1708} {Pfam: Zinc knuckle [PF00098.25, score=20.1]} {RNA1310_66460} {RNA815_51995} | |
| 8. | MligTC455_14401 | 7 | 0.15 | Mlig455_012600 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_012600 {REF} {Length: 628} {NoTransDecoderORF} |
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