Data search
Results for MligTC455_20891
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20891 | 5 | 0.11 | Mlig455_027273 | Neo: - Age: - |
WASHC4 | Mlig455_027273 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: WASH complex subunit 7, N-terminal [PF14745.8, score=495.6]; WASH complex subunit 7 [PF14744.8, score=491.9]; WASH complex subunit 7, C-terminal [PF14746.8, score=219.7]} {Human: ENSG00000136051, WASHC4, WASH complex subunit 4, [RH, Score=1100, Expect=0.0]} {Mouse: ENSMUSG00000034560, Washc4, WASH complex subunit 4, [RH, Score=1074, Expect=0.0]} {Dmel: FBgn0030739, SWIP, Strumpellin and WASH-interacting protein, [RH, Score=395, Expect=7e-119]} {Celegans: WBGene00013167, Y53F4B.21, [RH, Score=183, Expect=1e-46]} {Smed: dd_Smed_v6_4183_0_1, dd_Smed_v6_4183_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_4414} {RNA1310_2621, RNA1509_4414} {RNA1509_4414, RNA815_772} |
Cumulative graph for MligTC455_20891
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_20891
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20891 | 5 | 0.11 | Mlig455_027273 | Neo: - Age: - |
WASHC4 | 1 | - | - | - | - | 1.000 | - | Mlig455_027273 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: WASH complex subunit 7, N-terminal [PF14745.8, score=495.6]; WASH complex subunit 7 [PF14744.8, score=491.9]; WASH complex subunit 7, C-terminal [PF14746.8, score=219.7]} {Human: ENSG00000136051, WASHC4, WASH complex subunit 4, [RH, Score=1100, Expect=0.0]} {Mouse: ENSMUSG00000034560, Washc4, WASH complex subunit 4, [RH, Score=1074, Expect=0.0]} {Dmel: FBgn0030739, SWIP, Strumpellin and WASH-interacting protein, [RH, Score=395, Expect=7e-119]} {Celegans: WBGene00013167, Y53F4B.21, [RH, Score=183, Expect=1e-46]} {Smed: dd_Smed_v6_4183_0_1, dd_Smed_v6_4183_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_4414} {RNA1310_2621, RNA1509_4414} {RNA1509_4414, RNA815_772} |
| 2. | MligTC455_09500 | 21 | 0.45 | Mlig455_026734 | Neo: - Age: - |
0.997 | - | - | - | - | 0.997 | - | Mlig455_026734 {REF} {Length: 2668} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=142.4]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=246, Expect=6e-73]} {RNA1509_19376} {RNA1310_47426} {RNA815_43225} | |
| 3. | MligTC455_09624 | 5 | 0.1 | Mlig455_019644 | Neo: - Age: - |
0.997 | - | - | - | - | 0.997 | - | Mlig455_019644 {REF} {Length: 779} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_18639} {RNA1310_42584} {RNA815_16712} | |
| 4. | MligTC455_51737 | 49 | 1.01 | Mlig455_060275 | Neo: Germline Age: logFC(26M/2M)=-0.968 Region-enriched R4: 3.321/0.01433 |
HFM1 | 0.997 | - | - | - | - | 0.997 | - | Mlig455_060275 {REF} {Length: 5261} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=79.5]; Sec63 Brl domain [PF02889.18, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=34.2]; Type III restriction enzyme, res subunit [PF04851.17, score=33.2]; Helix-hairpin-helix domain [PF14520.8, score=22.6]} {Human: ENSG00000162669, HFM1, HFM1, ATP dependent DNA helicase homolog, [RH, Score=571, Expect=3e-177]} {Mouse: ENSMUSG00000043410, Hfm1, HFM1, ATP-dependent DNA helicase homolog, [RH, Score=568, Expect=1e-176]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [Score=280, Expect=5e-76]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [Score=265, Expect=2e-71]} {Smed: dd_Smed_v6_24408_0_1, dd_Smed_v6_24408_0_1, [RH, Score=448, Expect=5e-135]} {RNA1509_54934} {RNA1310_43917, RNA1509_54934} {RNA1509_54934, RNA815_48120} |
| 5. | MligTC455_12400 | 13 | 0.26 | Mlig455_049775 | Neo: - Age: - |
0.996 | - | - | - | - | 0.996 | - | Mlig455_049775 {REF} {Length: 1129} | |
| 6. | MligTC455_13120 | 12 | 0.24 | Mlig455_052885 | Neo: - Age: - |
0.991 | - | - | - | - | 0.991 | - | Mlig455_052885 {REF} {Length: 995} | |
| 7. | MligTC455_14908 | 12 | 0.25 | Mlig455_036162 | Neo: - Age: Down-Up-Down |
0.99 | - | - | - | - | 0.990 | - | Mlig455_036162 {REF} {Length: 959} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=202.4]; Sulfotransferase family [PF13469.8, score=22.4]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [RH, Score=181, Expect=3e-56]} {RNA1509_33205} {RNA1310_40261.1} {RNA815_9285.1} | |
| 8. | MligTC455_46589 | 83 | 1.72 | Mlig455_042396 | Neo: - Age: - |
ANKRD50 | 0.99 | - | - | - | - | 0.990 | - | Mlig455_042396 {REF} {Length: 4787} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=182.5]; Ankyrin repeats (many copies) [PF13637.8, score=113.6]; Ankyrin repeats (many copies) [PF13857.8, score=103.5]; Ankyrin repeat [PF13606.8, score=101.0]; Ankyrin repeat [PF00023.32, score=87.5]; Mab-21 protein [PF03281.16, score=30.5]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=165, Expect=7e-41]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=164, Expect=8e-41]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=156, Expect=3e-38]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=145, Expect=6e-35]} {Smed: dd_Smed_v6_2072_0_12, dd_Smed_v6_2072_0_12, [Score=148, Expect=5e-36]} {RNA1509_42401} {RNA1310_4658.1} {RNA815_6429.1} |
| 9. | MligTC455_24931 | 5 | 0.1 | Mlig455_041049 | Neo: - |
0.989 | - | - | - | - | 0.989 | - | Mlig455_041049 {REF} {Length: 2557} {NoTransDecoderORF} {RNA1509_32517} {RNA1310_34830.1} {RNA815_18494} | |
| 10. | MligTC455_11683 | 4 | 0.09 | Mlig455_032272 | Neo: Germline Age: - |
0.986 | - | - | - | - | 0.986 | - | Mlig455_032272 {REF} {Length: 1708} {Pfam: Zinc knuckle [PF00098.25, score=20.1]} {RNA1310_66460} {RNA815_51995} | |
| 11. | MligTC455_10375 | 17 | 0.35 | Mlig455_066826 | Neo: - Age: - |
0.985 | - | - | - | - | 0.985 | - | Mlig455_066826 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_65491} {RNA815_10554.1} | |
| 12. | MligTC455_37966 | 132 | 2.75 | Mlig455_068209 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.816/0.00001 Regeneration-upregulated R3: 5.497 Regeneration-enriched R3: 5.497 |
SPO11 | 0.983 | - | - | - | - | 0.983 | - | Mlig455_068209 {REF} {Length: 2220} {TRANSSPLICED} {Pfam: Type IIB DNA topoisomerase [PF04406.16, score=52.9]} {Human: ENSG00000054796, SPO11, SPO11, initiator of meiotic double stranded breaks, [RH, Score=147, Expect=2e-40]} {Mouse: ENSMUSG00000005883, Spo11, SPO11 meiotic protein covalently bound to DSB, [RH, Score=152, Expect=2e-42]} {Dmel: FBgn0002716, mei-W68, meiotic W68, [RH, Score=100, Expect=5e-24]} {Celegans: WBGene00004985, spo-11, Meiotic recombination protein spo-11, [RH, Score=121, Expect=7e-31]} {Smed: dd_Smed_v6_43889_0_1, dd_Smed_v6_43889_0_1, [RH, Score=94.7, Expect=4e-23]} {RNA1509_18827} {RNA1310_30958} {RNA815_2962.1} |
| 13. | MligTC455_01406 | 9 | 0.19 | Mlig455_057537 | Neo: - Age: - |
0.982 | - | - | - | - | 0.982 | - | Mlig455_057537 {REF} {Length: 1079} {NoTransDecoderORF} {RNA1509_48098} {RNA1310_73932} {RNA815_6533.1} | |
| 14. | MligTC455_38406 | 4 | 0.09 | Mlig455_063475 | Neo: - Age: - |
ANKRD50 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_063475 {REF} {Length: 4390} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=47.3]; Ankyrin repeats (many copies) [PF13637.8, score=41.0]; Ankyrin repeat [PF13606.8, score=39.8]; Ankyrin repeat [PF00023.32, score=30.6]; Ankyrin repeats (many copies) [PF13857.8, score=28.6]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=60.1, Expect=2e-08]; ENSG00000107104, KANK1, KN motif and ankyrin repeat domains 1, [Score=58.2, Expect=4e-08]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=59.3, Expect=2e-08]; ENSMUSG00000032702, Kank1, KN motif and ankyrin repeat domains 1, [Score=59.3, Expect=3e-08]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=57.0, Expect=1e-07]} {Dmel: FBgn0031473, CG3104, [Score=50.8, Expect=4e-06]} {Smed: dd_Smed_v6_11252_0_1, dd_Smed_v6_11252_0_1, [Score=53.1, Expect=6e-07]} {RNA1509_58343} {RNA1310_18384} {RNA815_44377} |
| 15. | MligTC455_41224 | 14 | 0.28 | Mlig455_045227 | Neo: Int S/G2/M Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_045227 {REF} {Length: 697} {RNA1310_99359} | |
| 16. | MligTC455_43026 | 40 | 0.83 | Mlig455_043737 | Neo: Int S/G2/M |
0.963 | - | - | - | - | 0.963 | - | Mlig455_043737 {REF} {Length: 3032} {TRANSSPLICED} {RNA1509_38177} {RNA1310_2879.2} {RNA815_7299} | |
| 17. | MligTC455_00801 | 10 | 0.2 | Mlig455_032874 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_032874 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_26475} | |
| 18. | MligTC455_09940 | 3 | 0.06 | Mlig455_067083 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_067083 {REF} {Length: 158} {NoTransDecoderORF} | |
| 19. | MligTC455_12038 | 6 | 0.12 | Mlig455_036560, Mlig455_057786 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_036560 {REF} {Length: 1679} Mlig455_057786 {REF} {Length: 1814} |
|
| 20. | MligTC455_14401 | 7 | 0.15 | Mlig455_012600 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_012600 {REF} {Length: 628} {NoTransDecoderORF} | |
| 21. | MligTC455_00259 | 2 | 0.05 | Mlig455_043126 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_043126 {REF} {Length: 373} {NoTransDecoderORF} | |
| 22. | MligTC455_42169 | 10 | 0.21 | Mlig455_011127 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_011127 {REF} {Length: 413} {NoTransDecoderORF} | |
| 23. | MligTC455_15865 | 6 | 0.12 | Mlig455_004735 | Neo: - Age: - |
TRPC5 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_004735 {REF} {Length: 2679} {Pfam: Transient receptor ion channel II [PF08344.13, score=102.7]; Ion transport protein [PF00520.33, score=91.0]; Polycystin cation channel [PF08016.14, score=32.2]; Ankyrin repeats (3 copies) [PF12796.9, score=31.0]; Ankyrin repeat [PF13606.8, score=29.9]; Ankyrin repeats (many copies) [PF13637.8, score=25.5]; Ankyrin repeat [PF00023.32, score=19.5]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=621, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=620, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=589, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=569, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=754, Expect=0.0]} {Smed: dd_Smed_v6_20491_0_1, dd_Smed_v6_20491_0_1, [Score=522, Expect=2e-171]} {RNA1310_103000} {RNA815_44973} |
Berezikov Lab - 2020-2021 © ERIBA