TomoSeq data search

Data search

Results for MligTC455_14443

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14443

75

1.56

Mlig455_000542

Neo: -

Age: -

Region-enriched R4: 5.977/0.02304
Region-enriched R5: 4.717/0.02271

GTF2H5

Mlig455_000542 {REF} {Length: 296} {Pfam: Transcription factor TFIIH complex subunit Tfb5 [PF06331.14, score=88.4]} {Human: ENSG00000272047, GTF2H5, general transcription factor IIH subunit 5, [RH, Score=76.6, Expect=5e-20]} {Mouse: ENSMUSG00000034345, Gtf2h5, general transcription factor IIH, polypeptide 5, [RH, Score=75.5, Expect=9e-20]} {Dmel: FBgn0265968, Tfb5, Transcription factor B5, [RH, Score=83.2, Expect=7e-23]} {Celegans: WBGene00021904, Y55B1AL.2, [RH, Score=63.2, Expect=4e-15]} {RNA1509_15559} {RNA1310_50167} {RNA815_21254}

Cumulative graph for MligTC455_14443

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-10.049	1.404	1.00000	1.00000
RegionR2	-0.089	1.404	0.74421	1.00000
RegionR3	1.943	1.404	0.68157	1.00000
RegionR4	5.977	1.404	0.00278	0.02304
RegionR5	4.717	1.404	0.00284	0.02271
RegionR6	-0.148	1.404	0.99982	1.00000
RegionR7	-2.848	1.404	0.99939	1.00000
RegionR8	0.497	1.404	0.98303	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.449	1.404	0.99967	1.00000
RegenerationR2	-1.637	1.404	0.42247	0.82897
RegenerationR3	-0.685	1.404	0.54411	0.88015
RegenerationR4	-1.93	1.404	0.77805	0.97971
RegenerationR5	-1.573	1.404	0.70695	0.95426
RegenerationR6	2.369	1.404	0.21987	0.56376
RegenerationBL	1.742	1.404	0.29052	0.65249
RegenerationTP	-1.039	1.404	0.95517	1.00000

Genes with expression patterns similar to MligTC455_14443

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14443	75	1.56	Mlig455_000542	Neo: - Age: - Region-enriched R4: 5.977/0.02304 Region-enriched R5: 4.717/0.02271	GTF2H5	3	-	-	1.000	1.000	1.000	-	Mlig455_000542 {REF} {Length: 296} {Pfam: Transcription factor TFIIH complex subunit Tfb5 [PF06331.14, score=88.4]} {Human: ENSG00000272047, GTF2H5, general transcription factor IIH subunit 5, [RH, Score=76.6, Expect=5e-20]} {Mouse: ENSMUSG00000034345, Gtf2h5, general transcription factor IIH, polypeptide 5, [RH, Score=75.5, Expect=9e-20]} {Dmel: FBgn0265968, Tfb5, Transcription factor B5, [RH, Score=83.2, Expect=7e-23]} {Celegans: WBGene00021904, Y55B1AL.2, [RH, Score=63.2, Expect=4e-15]} {RNA1509_15559} {RNA1310_50167} {RNA815_21254}
2.	MligTC455_47528	80	1.67	Mlig455_033824	Neo: - Age: Down-Up-Down	TSG101	0.987	-	-	-	-	0.987	-	Mlig455_033824 {REF} {Length: 5043} {Pfam: UEV domain [PF05743.15, score=133.4]; Vps23 core domain [PF09454.12, score=65.6]} {Human: ENSG00000074319, TSG101, tumor susceptibility 101, [RH, Score=282, Expect=8e-92]} {Mouse: ENSMUSG00000014402, Tsg101, tumor susceptibility gene 101, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0036666, TSG101, Tumor susceptibility gene 101, [RH, Score=261, Expect=6e-84]} {Celegans: WBGene00015658, tsg-101, Tumor Susceptibility Gene homolog, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_1686_0_1, dd_Smed_v6_1686_0_1, [Score=266, Expect=2e-86]} {RNA1509_5025} {RNA1310_48912.1} {RNA815_21967}
3.	MligTC455_14503	38	0.8	Mlig455_045819	Neo: - Age: Up-Down-Up		0.985	-	-	-	-	0.985	-	Mlig455_045819 {REF} {Length: 1474} {NoTransDecoderORF} {RNA1509_35184, RNA1509_56373} {RNA1310_57260, RNA1509_35184, RNA1509_56373} {RNA1509_35184, RNA1509_56373, RNA815_40601}
4.	MligTC455_17443	28	0.58	Mlig455_043145	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_043145 {REF} {Length: 1166} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=21.9]} {Smed: dd_Smed_v6_10825_0_1, dd_Smed_v6_10825_0_1, [RH, Score=95.9, Expect=8e-25]} {RNA1509_7355} {RNA1310_104476} {RNA815_29001.2}
5.	MligTC455_13195	123	2.57	Mlig455_059495	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.223	CHRNB3	0.959	-	-	-	-	0.959	-	Mlig455_059495 {REF} {Length: 4279} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=147.2]; Domain of unknown function (DUF4524) [PF15025.8, score=86.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=63.2]; Domain of unknown function (DUF4520) [PF15016.8, score=46.0]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=174, Expect=4e-46]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=172, Expect=2e-44]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=172, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=170, Expect=8e-45]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=170, Expect=2e-44]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=168, Expect=1e-43]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=178, Expect=1e-47]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=178, Expect=1e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=176, Expect=9e-47]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=171, Expect=4e-44]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=179, Expect=7e-48]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=176, Expect=6e-47]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=330, Expect=4e-103]} {RNA1509_41469} {RNA1310_14960.3} {RNA815_5441}
6.	MligTC455_00606	17	0.35	Mlig455_033542	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_033542 {REF} {Length: 168} {NoTransDecoderORF} {tRNA: Leu(CAA), score=57.1}

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