TomoSeq data search

Data search

Results for MligTC455_14503

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14503

38

0.80

Mlig455_045819

Neo: -

Age: Up-Down-Up

Mlig455_045819 {REF} {Length: 1474} {NoTransDecoderORF} {RNA1509_35184, RNA1509_56373} {RNA1310_57260, RNA1509_35184, RNA1509_56373} {RNA1509_35184, RNA1509_56373, RNA815_40601}

Cumulative graph for MligTC455_14503

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.717	1.294	0.99982	1.00000
RegionR2	1.421	1.294	0.27588	0.66126
RegionR3	1.322	1.294	0.21619	0.75772
RegionR4	1.501	1.294	0.24873	0.54777
RegionR5	0.461	1.294	0.48323	0.84722
RegionR6	-3.191	1.294	1.00000	1.00000
RegionR7	2.887	1.294	0.05400	0.44768
RegionR8	-2.684	1.294	0.99954	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.801	1.294	0.99997	1.00000
RegenerationR2	0.661	1.294	0.52285	0.88042
RegenerationR3	0.99	1.294	0.35025	0.77094
RegenerationR4	0.958	1.294	0.39611	0.81077
RegenerationR5	1.06	1.294	0.27456	0.70442
RegenerationR6	5.939	1.294	0.00034	0.01861
RegenerationBL	3.902	1.294	0.02717	0.18241
RegenerationTP	1.925	1.294	0.40136	0.82997

Genes with expression patterns similar to MligTC455_14503

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14503	38	0.8	Mlig455_045819	Neo: - Age: Up-Down-Up		4	1.000	-	-	1.000	1.000	1.000	Mlig455_045819 {REF} {Length: 1474} {NoTransDecoderORF} {RNA1509_35184, RNA1509_56373} {RNA1310_57260, RNA1509_35184, RNA1509_56373} {RNA1509_35184, RNA1509_56373, RNA815_40601}
2.	MligTC455_17443	28	0.58	Mlig455_043145	Neo: - Age: -		1.703	-	-	-	0.722	0.981	-	Mlig455_043145 {REF} {Length: 1166} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=21.9]} {Smed: dd_Smed_v6_10825_0_1, dd_Smed_v6_10825_0_1, [RH, Score=95.9, Expect=8e-25]} {RNA1509_7355} {RNA1310_104476} {RNA815_29001.2}
3.	MligTC455_14443	75	1.56	Mlig455_000542	Neo: - Age: - Region-enriched R4: 5.977/0.02304 Region-enriched R5: 4.717/0.02271	GTF2H5	0.985	-	-	-	-	0.985	-	Mlig455_000542 {REF} {Length: 296} {Pfam: Transcription factor TFIIH complex subunit Tfb5 [PF06331.14, score=88.4]} {Human: ENSG00000272047, GTF2H5, general transcription factor IIH subunit 5, [RH, Score=76.6, Expect=5e-20]} {Mouse: ENSMUSG00000034345, Gtf2h5, general transcription factor IIH, polypeptide 5, [RH, Score=75.5, Expect=9e-20]} {Dmel: FBgn0265968, Tfb5, Transcription factor B5, [RH, Score=83.2, Expect=7e-23]} {Celegans: WBGene00021904, Y55B1AL.2, [RH, Score=63.2, Expect=4e-15]} {RNA1509_15559} {RNA1310_50167} {RNA815_21254}
4.	MligTC455_00606	17	0.35	Mlig455_033542	Neo: - Age: -		0.98	-	-	-	-	0.980	-	Mlig455_033542 {REF} {Length: 168} {NoTransDecoderORF} {tRNA: Leu(CAA), score=57.1}
5.	MligTC455_08403	38	0.79	Mlig455_041644	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_041644 {REF} {Length: 391} {NoTransDecoderORF}
6.	MligTC455_47528	80	1.67	Mlig455_033824	Neo: - Age: Down-Up-Down	TSG101	0.974	-	-	-	-	0.974	-	Mlig455_033824 {REF} {Length: 5043} {Pfam: UEV domain [PF05743.15, score=133.4]; Vps23 core domain [PF09454.12, score=65.6]} {Human: ENSG00000074319, TSG101, tumor susceptibility 101, [RH, Score=282, Expect=8e-92]} {Mouse: ENSMUSG00000014402, Tsg101, tumor susceptibility gene 101, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0036666, TSG101, Tumor susceptibility gene 101, [RH, Score=261, Expect=6e-84]} {Celegans: WBGene00015658, tsg-101, Tumor Susceptibility Gene homolog, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_1686_0_1, dd_Smed_v6_1686_0_1, [Score=266, Expect=2e-86]} {RNA1509_5025} {RNA1310_48912.1} {RNA815_21967}
7.	MligTC455_12974	36	0.74	Mlig455_058152	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_058152 {REF} {Length: 1468} {NoTransDecoderORF} {RNA1509_59933} {RNA1310_80560} {RNA815_30086}
8.	MligTC455_26303	67	1.39	Mlig455_041962	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_041962 {REF} {Length: 3043} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=316.3]; Tetratricopeptide repeat [PF13424.8, score=30.1]} {Dmel: FBgn0250791, alphaSnap, alpha Soluble NSF attachment protein, [Score=56.2, Expect=3e-08]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=125, Expect=5e-32]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=107, Expect=1e-25]} {RNA1509_30138} {RNA1310_16406} {RNA815_18403}
9.	MligTC455_41196	1517	31.6	Mlig455_069276	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.648 Regeneration-enriched BL: 1.648	MRPS16	0.95	-	-	-	-	0.950	-	Mlig455_069276 {REF} {Length: 1370} {TRANSSPLICED} {Pfam: Ribosomal protein S16 [PF00886.21, score=47.9]} {Human: ENSG00000182180, MRPS16, mitochondrial ribosomal protein S16, [RH, Score=87.0, Expect=2e-22]} {Mouse: ENSMUSG00000049960, Mrps16, mitochondrial ribosomal protein S16, [RH, Score=82.8, Expect=8e-21]} {Dmel: FBgn0033907, mRpS16, mitochondrial ribosomal protein S16, [RH, Score=85.9, Expect=3e-22]} {Celegans: WBGene00018961, mrps-16, Probable 28S ribosomal protein S16, mitochondrial, [RH, Score=66.6, Expect=1e-14]} {Smed: dd_Smed_v6_1539_0_1, dd_Smed_v6_1539_0_1, [RH, Score=129, Expect=7e-39]} {RNA1509_24123, RNA1509_27278, RNA1509_29001, RNA1509_35030, RNA1509_42734, RNA1509_53690} {RNA1310_30341.1, RNA1509_24123, RNA1509_27278, RNA1509_29001, RNA1509_35030, RNA1509_42734, RNA1509_53690} {RNA1509_24123, RNA1509_27278, RNA1509_29001, RNA1509_35030, RNA1509_42734, RNA1509_53690, RNA815_45576}

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