Data search
Results for MligTC455_14588
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_14588 | 675 | 14.07 | Mlig455_063648 | Neo: Int S/G2/M Age: - |
CSRP2 | Mlig455_063648 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=93.5]; Zinc finger, C3HC4 type (RING finger) [PF17121.7, score=22.2]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=159, Expect=5e-49]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=117, Expect=8e-31]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=76.3, Expect=3e-18]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=98.2, Expect=1e-25]} {RNA1509_57252} {RNA1310_45023.1} {RNA815_22368} |
Cumulative graph for MligTC455_14588
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.813 | 4.174 | 0.16572 | 0.78980 | |
| RegionR2 | 0.99 | 4.174 | 0.03281 | 0.20643 | |
| RegionR3 | 0.397 | 4.174 | 0.31428 | 0.85359 | |
| RegionR4 | 0.39 | 4.174 | 0.35051 | 0.67204 | |
| RegionR5 | 0.648 | 4.174 | 0.06151 | 0.21705 | |
| RegionR6 | 0.463 | 4.174 | 0.24790 | 0.83387 | |
| RegionR7 | -0.124 | 4.174 | 0.83028 | 1.00000 | |
| RegionR8 | -0.949 | 4.174 | 0.24431 | 0.86093 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.255 | 4.174 | 0.90085 | 1.00000 | |
| RegenerationR2 | -0.305 | 4.174 | 0.37024 | 0.79580 | |
| RegenerationR3 | -0.274 | 4.174 | 0.48929 | 0.85384 | |
| RegenerationR4 | -0.17 | 4.174 | 0.65800 | 0.93724 | |
| RegenerationR5 | 0.153 | 4.174 | 0.65549 | 0.93412 | |
| RegenerationR6 | 1.065 | 4.174 | 0.00402 | 0.07584 | |
| RegenerationBL | 0.743 | 4.174 | 0.15187 | 0.46571 | |
| RegenerationTP | 1.035 | 4.174 | 0.08377 | 0.45878 |
Genes with expression patterns similar to MligTC455_14588
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_14588 | 675 | 14.07 | Mlig455_063648 | Neo: Int S/G2/M Age: - |
CSRP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063648 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=93.5]; Zinc finger, C3HC4 type (RING finger) [PF17121.7, score=22.2]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=159, Expect=5e-49]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=117, Expect=8e-31]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=76.3, Expect=3e-18]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=98.2, Expect=1e-25]} {RNA1509_57252} {RNA1310_45023.1} {RNA815_22368} |
| 2. | MligTC455_21264 | 2714 | 56.54 | Mlig455_001276 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.227 Regeneration-upregulated BL: 1.397 Regeneration-enriched BL: 1.397 |
HMGB1 | 1.675 | - | 0.714 | - | 0.961 | - | - | Mlig455_001276 {REF} {Length: 1258} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=123.1]; HMG-box domain [PF09011.12, score=117.6]} {Human: ENSG00000189403, HMGB1, high mobility group box 1, [RH, Score=177, Expect=4e-56]} {Mouse: ENSMUSG00000066551, Hmgb1, high mobility group box 1, [RH, Score=178, Expect=2e-56]} {Dmel: FBgn0278608, Dsp1, Dorsal switch protein 1, [Score=207, Expect=6e-66]} {Celegans: WBGene00001972, hmg-1.2, High mobility group protein 1.2, [RH, Score=155, Expect=2e-47]} {Smed: dd_Smed_v6_1331_0_1, dd_Smed_v6_1331_0_1, [Score=221, Expect=1e-72]} {RNA1509_27206, RNA1509_29453, RNA1509_4386} {RNA1310_23719, RNA1509_27206, RNA1509_29453, RNA1509_4386} {RNA1509_27206, RNA1509_29453, RNA1509_4386, RNA815_12466.2} |
| 3. | MligTC455_42865 | 712 | 14.83 | Mlig455_041423 | Neo: - Age: - |
SLC35F5 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_041423 {REF} {Length: 3297} {TRANSSPLICED} {Pfam: EamA-like transporter family [PF00892.22, score=44.0]; Solute carrier family 35 [PF06027.14, score=22.6]; Purine nucleobase transmembrane transport [PF16913.7, score=19.9]} {Human: ENSG00000115084, SLC35F5, solute carrier family 35 member F5, [Score=287, Expect=1e-88]} {Mouse: ENSMUSG00000026342, Slc35f5, solute carrier family 35, member F5, [Score=287, Expect=1e-88]} {Dmel: FBgn0034032, CG8195, [Score=258, Expect=9e-79]} {Celegans: WBGene00015009, B0041.5, [RH, Score=85.1, Expect=2e-17]} {Smed: dd_Smed_v6_7230_0_1, dd_Smed_v6_7230_0_1, [RH, Score=332, Expect=6e-106]} {RNA1509_13283} {RNA1310_13095.1} {RNA815_3892} |
| 4. | MligTC455_14318 | 68 | 1.41 | Mlig455_028885 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_028885 {REF} {Length: 2493} {NoTransDecoderORF} {RNA1509_50322} {RNA1310_32486} {RNA815_21416} | |
| 5. | MligTC455_35418 | 100 | 2.08 | Mlig455_044838 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.788 Region-enriched R2: 3.807/0.02986 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_044838 {REF} {Length: 1117} {Smed: dd_Smed_v6_15147_0_1, dd_Smed_v6_15147_0_1, [RH, Score=135, Expect=6e-35]} {RNA1310_45316.1} {RNA815_39596} | |
| 6. | MligTC455_30099 | 1989 | 41.44 | Mlig455_013060 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_013060 {REF} {Length: 4580} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=40.2]} {Dmel: FBgn0030541, CG11584, [Score=57.4, Expect=6e-08]} {RNA1509_37972} {RNA1310_27776.1} {RNA815_13510} |
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